| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is tal2 [H]
Identifier: 75907902
GI number: 75907902
Start: 2108287
End: 2109432
Strand: Direct
Name: tal2 [H]
Synonym: Ava_1681
Alternate gene names: 75907902
Gene position: 2108287-2109432 (Clockwise)
Preceding gene: 75907901
Following gene: 75907903
Centisome position: 33.12
GC content: 42.93
Gene sequence:
>1146_bases ATGGCCACCAATCATTTATTGGAGATTAAAAATTACGGTCAAAGTATCTGGATGGATAACTTGAACCGTGACATTATTCA ATCGGGTGAACTCAAAAATCTAGTTGAAAATCAAGGGATTTGTGGGATTACCTCTAATCCAGCGATTTTTGAAAAGGCGA TCGCCGATAATGTCATTTATGATGCTGATATCGAAGCTGGTGTGCGTGTGGGATTACCCACATACAAAATTTACGAATCC CTAATTTTTGCAGATATCCGTAACGCCTGTGATATCTTACGCCCTGTATATGAAGCCTCGAATAAATTAGACGGTTATGT GAGTATCGAAGTACCACCGACCATTGCCCATGATACACAAGCGACAATTAACGAAGCCCGCCGTTATTATCAAGAAATTG GGCGGGAAAATGTGATGATTAAAATCCCCGGTACTGAAGCCGGGTTACCAGCTGTAGAACAGGTAATAGCTGAGGGCATT AACGTTAACGTTACCCTGCTATTCTCGGTTCAAAGCTATATCAACACAGCTTGGGCATATATTCGGGGTTTAGAAAAACG CCTAGCCGAGGGTAAGGACATCAGCCAAATTGCTTCTGTTGCTAGCTTCTTCCTCAGTCGCATTGATAGCAACATTGACG GAAAAATTGATGCCAAACTAGCCCGTGGCATTGATGATATTAGTTTAGAAGCAAAACTGGTGGCTGTAAAAGGTAAAGTA GCGATCGCCAATGCCAAAATTGCTTATCAAGAATACAAAAAAATTATTGAGAGCGATAGATGGCAAGCCCTAGCAGCCAA AGGGGCAAAAGTGCAAAGATTATTATGGGCTAGCACCAGCACCAAAGACCCCAACTACAGCGATGTCATGTATGTCGATG AGTTAATTGGCCCCGATACCGTCAACACCTTACCACCAGCAACAATTACCGCTTGTGCCGACCATTGTGAAGTCGCTAGC CGTGTAGAAACAGGAGTTGCAGAAGCCTACCAATTGATCGAAAGCCTCAAAGACCCAGACATCAACATCGATATTAATGC CGTGATGGACGAATTGTTAATCGAAGGCATTAACAAATTTGTCCAACCCTTCCAGTCCCTTATGAACTCTTTAGAGGGCA AAGTCAAGCTATTGTCACCAGTATAG
Upstream 100 bases:
>100_bases TGAGAGACAAAGCAAAAATGCAAAAGTAACCATCAATACTTTGATGTGTTTTGTCGAAGTCACTTAAAACATCTTTTACG GGGTGAAACAAACTGTAGCT
Downstream 100 bases:
>100_bases GGACTGGGGATTAAGAAGAGGCAGGGGGGCAGGGAGTAGGGAGCAGGGGAGAAAACATTTACCTGATCCCAATCCCCAAT CCCCAGTACCCAGTCCCCAG
Product: transaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MATNHLLEIKNYGQSIWMDNLNRDIIQSGELKNLVENQGICGITSNPAIFEKAIADNVIYDADIEAGVRVGLPTYKIYES LIFADIRNACDILRPVYEASNKLDGYVSIEVPPTIAHDTQATINEARRYYQEIGRENVMIKIPGTEAGLPAVEQVIAEGI NVNVTLLFSVQSYINTAWAYIRGLEKRLAEGKDISQIASVASFFLSRIDSNIDGKIDAKLARGIDDISLEAKLVAVKGKV AIANAKIAYQEYKKIIESDRWQALAAKGAKVQRLLWASTSTKDPNYSDVMYVDELIGPDTVNTLPPATITACADHCEVAS RVETGVAEAYQLIESLKDPDINIDINAVMDELLIEGINKFVQPFQSLMNSLEGKVKLLSPV
Sequences:
>Translated_381_residues MATNHLLEIKNYGQSIWMDNLNRDIIQSGELKNLVENQGICGITSNPAIFEKAIADNVIYDADIEAGVRVGLPTYKIYES LIFADIRNACDILRPVYEASNKLDGYVSIEVPPTIAHDTQATINEARRYYQEIGRENVMIKIPGTEAGLPAVEQVIAEGI NVNVTLLFSVQSYINTAWAYIRGLEKRLAEGKDISQIASVASFFLSRIDSNIDGKIDAKLARGIDDISLEAKLVAVKGKV AIANAKIAYQEYKKIIESDRWQALAAKGAKVQRLLWASTSTKDPNYSDVMYVDELIGPDTVNTLPPATITACADHCEVAS RVETGVAEAYQLIESLKDPDINIDINAVMDELLIEGINKFVQPFQSLMNSLEGKVKLLSPV >Mature_380_residues ATNHLLEIKNYGQSIWMDNLNRDIIQSGELKNLVENQGICGITSNPAIFEKAIADNVIYDADIEAGVRVGLPTYKIYESL IFADIRNACDILRPVYEASNKLDGYVSIEVPPTIAHDTQATINEARRYYQEIGRENVMIKIPGTEAGLPAVEQVIAEGIN VNVTLLFSVQSYINTAWAYIRGLEKRLAEGKDISQIASVASFFLSRIDSNIDGKIDAKLARGIDDISLEAKLVAVKGKVA IANAKIAYQEYKKIIESDRWQALAAKGAKVQRLLWASTSTKDPNYSDVMYVDELIGPDTVNTLPPATITACADHCEVASR VETGVAEAYQLIESLKDPDINIDINAVMDELLIEGINKFVQPFQSLMNSLEGKVKLLSPV
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004732 - InterPro: IPR018225 - InterPro: IPR014634 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 41939; Mature: 41808
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNHLLEIKNYGQSIWMDNLNRDIIQSGELKNLVENQGICGITSNPAIFEKAIADNVIY CCCCCEEHHHHCCCHHHHCCCCHHHHCCCHHHHHHHCCCCEEECCCHHHHHHHHHCCCEE DADIEAGVRVGLPTYKIYESLIFADIRNACDILRPVYEASNKLDGYVSIEVPPTIAHDTQ ECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCH ATINEARRYYQEIGRENVMIKIPGTEAGLPAVEQVIAEGINVNVTLLFSVQSYINTAWAY HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHH IRGLEKRLAEGKDISQIASVASFFLSRIDSNIDGKIDAKLARGIDDISLEAKLVAVKGKV HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEEECEE AIANAKIAYQEYKKIIESDRWQALAAKGAKVQRLLWASTSTKDPNYSDVMYVDELIGPDT EEECHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC VNTLPPATITACADHCEVASRVETGVAEAYQLIESLKDPDINIDINAVMDELLIEGINKF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH VQPFQSLMNSLEGKVKLLSPV HHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure ATNHLLEIKNYGQSIWMDNLNRDIIQSGELKNLVENQGICGITSNPAIFEKAIADNVIY CCCCEEHHHHCCCHHHHCCCCHHHHCCCHHHHHHHCCCCEEECCCHHHHHHHHHCCCEE DADIEAGVRVGLPTYKIYESLIFADIRNACDILRPVYEASNKLDGYVSIEVPPTIAHDTQ ECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCH ATINEARRYYQEIGRENVMIKIPGTEAGLPAVEQVIAEGINVNVTLLFSVQSYINTAWAY HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHH IRGLEKRLAEGKDISQIASVASFFLSRIDSNIDGKIDAKLARGIDDISLEAKLVAVKGKV HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEEECEE AIANAKIAYQEYKKIIESDRWQALAAKGAKVQRLLWASTSTKDPNYSDVMYVDELIGPDT EEECHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC VNTLPPATITACADHCEVASRVETGVAEAYQLIESLKDPDINIDINAVMDELLIEGINKF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH VQPFQSLMNSLEGKVKLLSPV HHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566707; 11759840 [H]