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The map label for this gene is tnpR [H]

Identifier: 75676521

GI number: 75676521

Start: 2553267

End: 2554865

Strand: Direct

Name: tnpR [H]

Synonym: Nwi_2336

Alternate gene names: 75676521

Gene position: 2553267-2554865 (Clockwise)

Preceding gene: 75676520

Following gene: 75676524

Centisome position: 75.05

GC content: 60.29

Gene sequence:

>1599_bases
GTGAGAGCGGGAAAAGCGTTGTCCCGAGAGATCGTCCGGTGCGCGATCTATACCCGGGTCTCGACCGACAACGGACTCGA
CCAGGAGTTCAACTCGCTGGACGCCCAGTTTGAGGCTTCCAGTGCCTATATCAAAAGCCAGGCCCATGCCGGTTGGGTGC
AAGTCAAAACCCGCCGCTATGACGATGGTGGTTTCTCCGGCGGATCAACCGACCGGCCGGCGCTGCAGAGCCTGCTCGAG
GATATCCGGGCCCGCAAGATCGATGTCATCGTGGTCTACAAAGTCGACCGTCTGACCCGCTCACTCGCCGACTTCGCCAA
ACTGGTCGAGCTGTTCGATGCCCATGGCGTTTCGTTTGTCTCGGTCACCCAGCAGTTCAATACCACAACGTCCATGGGAC
GCCTGACCCTCAACGTTCTCTTGTCCTTTGCTCAGTTCGAGCGGGAGGTCACCTCCGAACGCATCCGGGACAAGGTTGCG
GCCTCCAAGAAGAAGGGCATCTGGGTCGGAGGTCCCCTCCCCCTCGGCTACGTCATGGAGAACGGCAAGGTGGCCGTCGT
CGAAGAAGAAGCCTCGCGGGTTCGTCACATCTTTGGCCGCTATCTCGAACTCGGCAGTGTCCGTGCCCTGATGCGGGACC
TCAAGGACCGCAACATCGTCAGCAGGCAGCGTCTTCTCAAAACCGGAGTAACTCGGGGCGGTGTTCCGTTCGGCTGTGGA
GCCTTATTCCACCTGTTGCGCAATCGTTTCTACATTGGCGAGGTTAACTACAAGGGCCAGATCTATCCGGGCGAGCAGCC
CCCGATCCTGGAGCGCGACCTGTTCGAGCGCGTCCAAACGATGCTCACGGACCAGCGGAGTCATCAAACCAGAACCCGGA
CCTCCTTCAGCCATCTCCTGACCGGTCTGATGTTTGACGACGCCGGCCATCGCATGGCGCCGACCCAGGCCCAGAAGAAG
GGCCGACACTACAGCTACTATGTCTCGCGGCCGCTTCTGTTCGGGAATGCAGCGACCGCCGCGGTTGGTTCGGTCTCTCG
GGTGCCTGCCCCTGACATCGACGAGCAGGTCCGCAAGGTTGTGCTGGAGCCGCGACACAAAAGCACGAGCCCGATCGACA
ACACCTACGCCTCCTTGCTGATCGAACGGATTGAGGTCCAGCAAAACCGCCTCGTCGTGCAGCTGAAGCAGGATCCAGAC
ATCACCATCGAAGAAAACCACTCCACCATCGTCATCCCCTGGACTAAGCCACCCTCCAAACGAGCGCGATCAGTCCTGCG
CCCGACCTCCGCAAAACTTCCACTCCGCCCGATGAAGCTGGAGCGACGCGCCACGCTGGTCGCAGCGATTGCCCGCGGCC
GGCGCTGGCTCGACGAACTCATTACGGACTCGGCGATAGATACCCAAACAATCGCAAAACGCGAACGATGCAGCCTGCGA
CACGTCAACATGACTCTGTCGTTGGCCTTCCTCTCTCCCGTACTCACCAAGGCTGCCGTTGAAGGCCGGTTGCCACGTGG
CATCGGTCTCGAACAACTGCGCGAGCTTCCGCTTCAATGGGATCGTCAGTTCGAAGCGCTAGGTTTCGGTCCGATCTGA

Upstream 100 bases:

>100_bases
ACAGCCTTTCAGCGATCGCCTTCGCCATCACCGGTACCCGCTGGAGCGGCCCCCGCTTCTTTGGCCTTCGGGATAGCACG
GTCGGTGGGGAGGATGGGCC

Downstream 100 bases:

>100_bases
CGAGCGCCACCGTCCTTTGGTCTGCCATTTCCAAGTCGCGGCGGAACCGTTCCTGGCATCTCCCCAAAATTTCAAGAAGA
CGGGCAGAACACAGCCGTCC

Product: resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MRAGKALSREIVRCAIYTRVSTDNGLDQEFNSLDAQFEASSAYIKSQAHAGWVQVKTRRYDDGGFSGGSTDRPALQSLLE
DIRARKIDVIVVYKVDRLTRSLADFAKLVELFDAHGVSFVSVTQQFNTTTSMGRLTLNVLLSFAQFEREVTSERIRDKVA
ASKKKGIWVGGPLPLGYVMENGKVAVVEEEASRVRHIFGRYLELGSVRALMRDLKDRNIVSRQRLLKTGVTRGGVPFGCG
ALFHLLRNRFYIGEVNYKGQIYPGEQPPILERDLFERVQTMLTDQRSHQTRTRTSFSHLLTGLMFDDAGHRMAPTQAQKK
GRHYSYYVSRPLLFGNAATAAVGSVSRVPAPDIDEQVRKVVLEPRHKSTSPIDNTYASLLIERIEVQQNRLVVQLKQDPD
ITIEENHSTIVIPWTKPPSKRARSVLRPTSAKLPLRPMKLERRATLVAAIARGRRWLDELITDSAIDTQTIAKRERCSLR
HVNMTLSLAFLSPVLTKAAVEGRLPRGIGLEQLRELPLQWDRQFEALGFGPI

Sequences:

>Translated_532_residues
MRAGKALSREIVRCAIYTRVSTDNGLDQEFNSLDAQFEASSAYIKSQAHAGWVQVKTRRYDDGGFSGGSTDRPALQSLLE
DIRARKIDVIVVYKVDRLTRSLADFAKLVELFDAHGVSFVSVTQQFNTTTSMGRLTLNVLLSFAQFEREVTSERIRDKVA
ASKKKGIWVGGPLPLGYVMENGKVAVVEEEASRVRHIFGRYLELGSVRALMRDLKDRNIVSRQRLLKTGVTRGGVPFGCG
ALFHLLRNRFYIGEVNYKGQIYPGEQPPILERDLFERVQTMLTDQRSHQTRTRTSFSHLLTGLMFDDAGHRMAPTQAQKK
GRHYSYYVSRPLLFGNAATAAVGSVSRVPAPDIDEQVRKVVLEPRHKSTSPIDNTYASLLIERIEVQQNRLVVQLKQDPD
ITIEENHSTIVIPWTKPPSKRARSVLRPTSAKLPLRPMKLERRATLVAAIARGRRWLDELITDSAIDTQTIAKRERCSLR
HVNMTLSLAFLSPVLTKAAVEGRLPRGIGLEQLRELPLQWDRQFEALGFGPI
>Mature_532_residues
MRAGKALSREIVRCAIYTRVSTDNGLDQEFNSLDAQFEASSAYIKSQAHAGWVQVKTRRYDDGGFSGGSTDRPALQSLLE
DIRARKIDVIVVYKVDRLTRSLADFAKLVELFDAHGVSFVSVTQQFNTTTSMGRLTLNVLLSFAQFEREVTSERIRDKVA
ASKKKGIWVGGPLPLGYVMENGKVAVVEEEASRVRHIFGRYLELGSVRALMRDLKDRNIVSRQRLLKTGVTRGGVPFGCG
ALFHLLRNRFYIGEVNYKGQIYPGEQPPILERDLFERVQTMLTDQRSHQTRTRTSFSHLLTGLMFDDAGHRMAPTQAQKK
GRHYSYYVSRPLLFGNAATAAVGSVSRVPAPDIDEQVRKVVLEPRHKSTSPIDNTYASLLIERIEVQQNRLVVQLKQDPD
ITIEENHSTIVIPWTKPPSKRARSVLRPTSAKLPLRPMKLERRATLVAAIARGRRWLDELITDSAIDTQTIAKRERCSLR
HVNMTLSLAFLSPVLTKAAVEGRLPRGIGLEQLRELPLQWDRQFEALGFGPI

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=159, Percent_Identity=32.7044025157233, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 59931; Mature: 59931

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGKALSREIVRCAIYTRVSTDNGLDQEFNSLDAQFEASSAYIKSQAHAGWVQVKTRRY
CCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEC
DDGGFSGGSTDRPALQSLLEDIRARKIDVIVVYKVDRLTRSLADFAKLVELFDAHGVSFV
CCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEE
SVTQQFNTTTSMGRLTLNVLLSFAQFEREVTSERIRDKVAASKKKGIWVGGPLPLGYVME
EHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEE
NGKVAVVEEEASRVRHIFGRYLELGSVRALMRDLKDRNIVSRQRLLKTGVTRGGVPFGCG
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHH
ALFHLLRNRFYIGEVNYKGQIYPGEQPPILERDLFERVQTMLTDQRSHQTRTRTSFSHLL
HHHHHHHCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGLMFDDAGHRMAPTQAQKKGRHYSYYVSRPLLFGNAATAAVGSVSRVPAPDIDEQVRKV
HHHHHCCCCCCCCCCHHHHCCCCEEEEECCCEEECCHHHHHHCCCCCCCCCCHHHHHHHH
VLEPRHKSTSPIDNTYASLLIERIEVQQNRLVVQLKQDPDITIEENHSTIVIPWTKPPSK
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCEEEEECCCCHHH
RARSVLRPTSAKLPLRPMKLERRATLVAAIARGRRWLDELITDSAIDTQTIAKRERCSLR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCE
HVNMTLSLAFLSPVLTKAAVEGRLPRGIGLEQLRELPLQWDRQFEALGFGPI
EECCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHCCCHHCCCCCCC
>Mature Secondary Structure
MRAGKALSREIVRCAIYTRVSTDNGLDQEFNSLDAQFEASSAYIKSQAHAGWVQVKTRRY
CCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEC
DDGGFSGGSTDRPALQSLLEDIRARKIDVIVVYKVDRLTRSLADFAKLVELFDAHGVSFV
CCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEE
SVTQQFNTTTSMGRLTLNVLLSFAQFEREVTSERIRDKVAASKKKGIWVGGPLPLGYVME
EHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEE
NGKVAVVEEEASRVRHIFGRYLELGSVRALMRDLKDRNIVSRQRLLKTGVTRGGVPFGCG
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHH
ALFHLLRNRFYIGEVNYKGQIYPGEQPPILERDLFERVQTMLTDQRSHQTRTRTSFSHLL
HHHHHHHCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGLMFDDAGHRMAPTQAQKKGRHYSYYVSRPLLFGNAATAAVGSVSRVPAPDIDEQVRKV
HHHHHCCCCCCCCCCHHHHCCCCEEEEECCCEEECCHHHHHHCCCCCCCCCCHHHHHHHH
VLEPRHKSTSPIDNTYASLLIERIEVQQNRLVVQLKQDPDITIEENHSTIVIPWTKPPSK
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCEEEEECCCCHHH
RARSVLRPTSAKLPLRPMKLERRATLVAAIARGRRWLDELITDSAIDTQTIAKRERCSLR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCE
HVNMTLSLAFLSPVLTKAAVEGRLPRGIGLEQLRELPLQWDRQFEALGFGPI
EECCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2997130 [H]