| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is groES [H]
Identifier: 75676376
GI number: 75676376
Start: 2384930
End: 2385247
Strand: Direct
Name: groES [H]
Synonym: Nwi_2191
Alternate gene names: 75676376
Gene position: 2384930-2385247 (Clockwise)
Preceding gene: 75676371
Following gene: 75676377
Centisome position: 70.1
GC content: 63.84
Gene sequence:
>318_bases ATGAAATTCCGTCCGCTTCACGACCGCGTCGTGGTCAAGCGCATCGACGCAGAAGAGAAGACCGCAGGCGGCATCATCAT TCCCGACACGGCCAAGGAAAAGCCCTCGCAGGGCGAGGTTGTCGCCGTCGGCCCCGGCGGCCGCGACGAGGCCGGCAAGC TGATCCCGATCGACCTCAAGGTCGGCGACCGCGTGTTGTTCGGCAAGTGGTCCGGCACCGAGGTCAAGATCGAGGGTCAG GATCTCCTGATCATGAAGGAATCCGACATCATGGGCGTCCTCACCGACGTCGCGCCCGCCAAGAAGAAGGCCGCCTGA
Upstream 100 bases:
>100_bases CGAGCGTGCCTTATGTCCTGTGCGGTCATGCTGGCACTCGCTGGTATTGACTGCCAGAATTCACAAACATCACAGATTTT CAATGTCTTAGGAGGACTGC
Downstream 100 bases:
>100_bases GCGCCATTCCCTGCACGATCATTCAAAGGAACAACTCAACATGTCAGCCAAAGATGTCAAATTCGGCGTCGACGCTCGCG ACAAGATGCTGCGCGGCGTG
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein 2; Protein Cpn10 2 [H]
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MKFRPLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEVVAVGPGGRDEAGKLIPIDLKVGDRVLFGKWSGTEVKIEGQ DLLIMKESDIMGVLTDVAPAKKKAA
Sequences:
>Translated_105_residues MKFRPLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEVVAVGPGGRDEAGKLIPIDLKVGDRVLFGKWSGTEVKIEGQ DLLIMKESDIMGVLTDVAPAKKKAA >Mature_105_residues MKFRPLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEVVAVGPGGRDEAGKLIPIDLKVGDRVLFGKWSGTEVKIEGQ DLLIMKESDIMGVLTDVAPAKKKAA
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Homo sapiens, GI4504523, Length=95, Percent_Identity=42.1052631578947, Blast_Score=71, Evalue=1e-13, Organism=Homo sapiens, GI169210012, Length=95, Percent_Identity=41.0526315789474, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790585, Length=95, Percent_Identity=48.4210526315789, Blast_Score=90, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17555568, Length=92, Percent_Identity=44.5652173913043, Blast_Score=89, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324594, Length=89, Percent_Identity=41.5730337078652, Blast_Score=73, Evalue=7e-15, Organism=Drosophila melanogaster, GI21356029, Length=96, Percent_Identity=44.7916666666667, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI21358317, Length=95, Percent_Identity=41.0526315789474, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 11275; Mature: 11275
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRPLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEVVAVGPGGRDEAGKLIPIDLK CCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC VGDRVLFGKWSGTEVKIEGQDLLIMKESDIMGVLTDVAPAKKKAA CCCEEEEECCCCCEEEECCCEEEEEECCCCEEEEECCCCCCCCCC >Mature Secondary Structure MKFRPLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEVVAVGPGGRDEAGKLIPIDLK CCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC VGDRVLFGKWSGTEVKIEGQDLLIMKESDIMGVLTDVAPAKKKAA CCCEEEEECCCCCEEEECCCEEEEEECCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA