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The map label for this gene is yubM [H]

Identifier: 75676309

GI number: 75676309

Start: 2317208

End: 2319361

Strand: Direct

Name: yubM [H]

Synonym: Nwi_2123

Alternate gene names: 75676309

Gene position: 2317208-2319361 (Clockwise)

Preceding gene: 75676308

Following gene: 75676310

Centisome position: 68.11

GC content: 67.73

Gene sequence:

>2154_bases
ATGGCAAAGGCTGCCAGGAAGATCGTCTTCTCGCGCTCGCGCGACATCCCCTTCAACAAGCTCGTGCTCTCGGAGTCCAA
TGTCCGGCGAACCCGGCCGGAGGCCGAGCTCGACGAGCTGGTCCACGACATCGACCGGCGCGAGGACCTCGTGCAGGGCC
TCAACGTCCGCGCCATCCTCGACGCGGACGGCAATGAGACCGGCATGTTCGAGGTGCCAGCCGGCGGGCGCCGCTATCGC
GCTATCGAGCGCCTGGTCAAGGCCAAGCGCTTCCCGAAGGACGGACTCGTCCCCTGCATCGTGCGCAAGTCCGACACCAG
AATCCTCGCCGAAGACGACTCCCTCGCCGAGAACCTGCTGCGCGCCGGACTTCATCCGCTCGACCAGTTCCGGGCGTTCC
AGGACATGCTCGACAATGGCATGACCGAGGAGGAAATCGCCGCGGCCTATCTCACGACGGTGCAGGTCGTGAAGCAGCGC
CTCCGTCTCAACGCGGTCTCGCCCGTGCTGCGCGATGCCTATGCCGAGGAGCGCATGACACTCGACATGCTGATGGCCTT
CACCGTCAACCCGGACCACCAGAGCCAGGAGCAGGTGTGGGAGGCCGTGCAGCATTCCTACAATCGGCAGCCCTGGCATA
TCCGCCAGTTGCTGACCGAGACCACGATCCCCGCCTCCGACAAGCGCGCGCGCTTTGTCGGCATCGACGCCTATGTCGCC
GCCGGCGGTGCGGTGCTGCGCGACCTGTTCGAGGACGACGACGGCGGCTGGCTCGCCGACCCGGCGCTCCTTCACCGCCT
GGTCAGCGAGAAGCTGAAGGCGGTCGCGGACGAGATCGCCGCCGAAGGCTGGAAGTGGATCAAGATCGACCTCGACCTGC
CCTACGGCTACGACCACGGCCTGCGCCAGATCGGCGGCACCTTCGTCGATCTCACCGAGAAAGAGCGGGCCGAACGCGAG
GCGCTGCGCGCCGAGTACGACCGGCTCGAAGCGGAGTATGACGGCGCCGACGAGCTGCCGGACGAGATCGACCAGCGCCT
GGGCGAGATCGAGGAGGCGCTTGAAGCCTTCGAGAAGCGTCCCGTCGTCTACGATCCCGCCGACATCGCGCGCGCCGGCG
TCTTCGTCAGCGTCGATCGCGATGGCGACATCGTGGTCGATCGCGGCTATGTGCGGCCGGAGGACGAGGCGCCTGTCGCC
GTCAACGGCAGCGGCGCCGAGGTCGTTCGCGAGCCTGACGCTGTCGATGCTCCCGCGACCCCGTCCGCTCAGCGCGCCGT
CATCACCATCCGCGGCCAGGGCACGGACGCGGACGATGACGAGGAGGACGACGCCATCAAGCCGCTGCCCGAGCGGCTGG
TGATCGAGCTCACCGCCCATCGCACGCTGGCGCTGCGCGATGCCGTAGCCAACCACCCGCAGGTCGCTCTGACGGCCCTC
CTGCACAAGCTGGTGCTCGACGCCTTCAAGCGTAACGCGCACGGCTGCGCCGTCGAGGCGTCCGTCCGGGAGGTCCACTT
CCCCGTTCAGGCAACCGACCTGAAGGACAGCGCCTCCGCCAAGGCCATCCAGGCGCGCATGGACGCCTGGAAGGCCGACA
TGCCGCTCGAGGACGACGACCGGCTGTGGAACTGGATCGCCGGCCTCGACGATGCGAGCCGTCTCGCGCTGCTCGCGCAC
TGCGTCAGCTACGGGATCAACGCTCTCTACGAGCGTCCGAATCCCCATAGCGGCTATGGCGTCACCCAGCATGGGCTCGA
CCGGCGCATGCGCGATGCCGATCGGCTGGCGCGCGCCACCAGCCTCGACATGGTGGAGGCCGGATGGCGGCCGACCGTCG
CGAACTATCTCGGCCGCGTGACGAAGAGCCGGATCATCGAAGCCGTCCGGGAAGCGCTCGGCGAAGAGAAGGCTCAGCTC
ATAGATCATCTCAAGAAGCCCGAGATGGCGAAGGAGGCCGAGCGCCTGCTCGCCGACACCGGCTGGCTGCCGGAGCCGCT
GCGGTCCGCCGATCCCGATGCGACGACCTCGGTCGATGTAAGCGGAGGTGAAGGCGATGAAACACTGCCGGCCTTCCTCG
CCGACGATGAGGACGAGCAGGCGGATGACGGCGAAGGCGATGCCGACGACCGGGCGATGATCGCCGCCGAATGA

Upstream 100 bases:

>100_bases
GGAGCCGCCGCCCCTCAGAGTGAGAGGGCGGCGCTTCGCTTCGTGACGGGTTTGGAGACCGAGAGAGAGGCTCTCGGCGC
CCGTCGCGGAGTATCCCGAC

Downstream 100 bases:

>100_bases
CGGAACCCACGGCGGGGCGGCTCCGGCTGCTCCCGCCACCCCTCGATCAGGAGCAATCCGATGACCAAGCTCAGCTCGGC
CACGCCTCGCCGCGTCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 716

Protein sequence:

>717_residues
MAKAARKIVFSRSRDIPFNKLVLSESNVRRTRPEAELDELVHDIDRREDLVQGLNVRAILDADGNETGMFEVPAGGRRYR
AIERLVKAKRFPKDGLVPCIVRKSDTRILAEDDSLAENLLRAGLHPLDQFRAFQDMLDNGMTEEEIAAAYLTTVQVVKQR
LRLNAVSPVLRDAYAEERMTLDMLMAFTVNPDHQSQEQVWEAVQHSYNRQPWHIRQLLTETTIPASDKRARFVGIDAYVA
AGGAVLRDLFEDDDGGWLADPALLHRLVSEKLKAVADEIAAEGWKWIKIDLDLPYGYDHGLRQIGGTFVDLTEKERAERE
ALRAEYDRLEAEYDGADELPDEIDQRLGEIEEALEAFEKRPVVYDPADIARAGVFVSVDRDGDIVVDRGYVRPEDEAPVA
VNGSGAEVVREPDAVDAPATPSAQRAVITIRGQGTDADDDEEDDAIKPLPERLVIELTAHRTLALRDAVANHPQVALTAL
LHKLVLDAFKRNAHGCAVEASVREVHFPVQATDLKDSASAKAIQARMDAWKADMPLEDDDRLWNWIAGLDDASRLALLAH
CVSYGINALYERPNPHSGYGVTQHGLDRRMRDADRLARATSLDMVEAGWRPTVANYLGRVTKSRIIEAVREALGEEKAQL
IDHLKKPEMAKEAERLLADTGWLPEPLRSADPDATTSVDVSGGEGDETLPAFLADDEDEQADDGEGDADDRAMIAAE

Sequences:

>Translated_717_residues
MAKAARKIVFSRSRDIPFNKLVLSESNVRRTRPEAELDELVHDIDRREDLVQGLNVRAILDADGNETGMFEVPAGGRRYR
AIERLVKAKRFPKDGLVPCIVRKSDTRILAEDDSLAENLLRAGLHPLDQFRAFQDMLDNGMTEEEIAAAYLTTVQVVKQR
LRLNAVSPVLRDAYAEERMTLDMLMAFTVNPDHQSQEQVWEAVQHSYNRQPWHIRQLLTETTIPASDKRARFVGIDAYVA
AGGAVLRDLFEDDDGGWLADPALLHRLVSEKLKAVADEIAAEGWKWIKIDLDLPYGYDHGLRQIGGTFVDLTEKERAERE
ALRAEYDRLEAEYDGADELPDEIDQRLGEIEEALEAFEKRPVVYDPADIARAGVFVSVDRDGDIVVDRGYVRPEDEAPVA
VNGSGAEVVREPDAVDAPATPSAQRAVITIRGQGTDADDDEEDDAIKPLPERLVIELTAHRTLALRDAVANHPQVALTAL
LHKLVLDAFKRNAHGCAVEASVREVHFPVQATDLKDSASAKAIQARMDAWKADMPLEDDDRLWNWIAGLDDASRLALLAH
CVSYGINALYERPNPHSGYGVTQHGLDRRMRDADRLARATSLDMVEAGWRPTVANYLGRVTKSRIIEAVREALGEEKAQL
IDHLKKPEMAKEAERLLADTGWLPEPLRSADPDATTSVDVSGGEGDETLPAFLADDEDEQADDGEGDADDRAMIAAE
>Mature_716_residues
AKAARKIVFSRSRDIPFNKLVLSESNVRRTRPEAELDELVHDIDRREDLVQGLNVRAILDADGNETGMFEVPAGGRRYRA
IERLVKAKRFPKDGLVPCIVRKSDTRILAEDDSLAENLLRAGLHPLDQFRAFQDMLDNGMTEEEIAAAYLTTVQVVKQRL
RLNAVSPVLRDAYAEERMTLDMLMAFTVNPDHQSQEQVWEAVQHSYNRQPWHIRQLLTETTIPASDKRARFVGIDAYVAA
GGAVLRDLFEDDDGGWLADPALLHRLVSEKLKAVADEIAAEGWKWIKIDLDLPYGYDHGLRQIGGTFVDLTEKERAEREA
LRAEYDRLEAEYDGADELPDEIDQRLGEIEEALEAFEKRPVVYDPADIARAGVFVSVDRDGDIVVDRGYVRPEDEAPVAV
NGSGAEVVREPDAVDAPATPSAQRAVITIRGQGTDADDDEEDDAIKPLPERLVIELTAHRTLALRDAVANHPQVALTALL
HKLVLDAFKRNAHGCAVEASVREVHFPVQATDLKDSASAKAIQARMDAWKADMPLEDDDRLWNWIAGLDDASRLALLAHC
VSYGINALYERPNPHSGYGVTQHGLDRRMRDADRLARATSLDMVEAGWRPTVANYLGRVTKSRIIEAVREALGEEKAQLI
DHLKKPEMAKEAERLLADTGWLPEPLRSADPDATTSVDVSGGEGDETLPAFLADDEDEQADDGEGDADDRAMIAAE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 79689; Mature: 79558

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAARKIVFSRSRDIPFNKLVLSESNVRRTRPEAELDELVHDIDRREDLVQGLNVRAIL
CCHHHHHHHHHCCCCCCHHHEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
DADGNETGMFEVPAGGRRYRAIERLVKAKRFPKDGLVPCIVRKSDTRILAEDDSLAENLL
ECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCHHHHHHHH
RAGLHPLDQFRAFQDMLDNGMTEEEIAAAYLTTVQVVKQRLRLNAVSPVLRDAYAEERMT
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDMLMAFTVNPDHQSQEQVWEAVQHSYNRQPWHIRQLLTETTIPASDKRARFVGIDAYVA
HHHHHHEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHH
AGGAVLRDLFEDDDGGWLADPALLHRLVSEKLKAVADEIAAEGWKWIKIDLDLPYGYDHG
HHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHH
LRQIGGTFVDLTEKERAEREALRAEYDRLEAEYDGADELPDEIDQRLGEIEEALEAFEKR
HHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PVVYDPADIARAGVFVSVDRDGDIVVDRGYVRPEDEAPVAVNGSGAEVVREPDAVDAPAT
CCEECCHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCCCCCC
PSAQRAVITIRGQGTDADDDEEDDAIKPLPERLVIELTAHRTLALRDAVANHPQVALTAL
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHEEEHHCCHHHHHHHHHCCCCHHHHHHH
LHKLVLDAFKRNAHGCAVEASVREVHFPVQATDLKDSASAKAIQARMDAWKADMPLEDDD
HHHHHHHHHHCCCCCCEEECHHHHEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCH
RLWNWIAGLDDASRLALLAHCVSYGINALYERPNPHSGYGVTQHGLDRRMRDADRLARAT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SLDMVEAGWRPTVANYLGRVTKSRIIEAVREALGEEKAQLIDHLKKPEMAKEAERLLADT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHC
GWLPEPLRSADPDATTSVDVSGGEGDETLPAFLADDEDEQADDGEGDADDRAMIAAE
CCCCCHHHCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
AKAARKIVFSRSRDIPFNKLVLSESNVRRTRPEAELDELVHDIDRREDLVQGLNVRAIL
CHHHHHHHHHCCCCCCHHHEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
DADGNETGMFEVPAGGRRYRAIERLVKAKRFPKDGLVPCIVRKSDTRILAEDDSLAENLL
ECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCHHHHHHHH
RAGLHPLDQFRAFQDMLDNGMTEEEIAAAYLTTVQVVKQRLRLNAVSPVLRDAYAEERMT
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDMLMAFTVNPDHQSQEQVWEAVQHSYNRQPWHIRQLLTETTIPASDKRARFVGIDAYVA
HHHHHHEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHH
AGGAVLRDLFEDDDGGWLADPALLHRLVSEKLKAVADEIAAEGWKWIKIDLDLPYGYDHG
HHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHH
LRQIGGTFVDLTEKERAEREALRAEYDRLEAEYDGADELPDEIDQRLGEIEEALEAFEKR
HHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PVVYDPADIARAGVFVSVDRDGDIVVDRGYVRPEDEAPVAVNGSGAEVVREPDAVDAPAT
CCEECCHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCCCCCC
PSAQRAVITIRGQGTDADDDEEDDAIKPLPERLVIELTAHRTLALRDAVANHPQVALTAL
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHEEEHHCCHHHHHHHHHCCCCHHHHHHH
LHKLVLDAFKRNAHGCAVEASVREVHFPVQATDLKDSASAKAIQARMDAWKADMPLEDDD
HHHHHHHHHHCCCCCCEEECHHHHEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCH
RLWNWIAGLDDASRLALLAHCVSYGINALYERPNPHSGYGVTQHGLDRRMRDADRLARAT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SLDMVEAGWRPTVANYLGRVTKSRIIEAVREALGEEKAQLIDHLKKPEMAKEAERLLADT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHC
GWLPEPLRSADPDATTSVDVSGGEGDETLPAFLADDEDEQADDGEGDADDRAMIAAE
CCCCCHHHCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]