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The map label for this gene is ydjA [H]

Identifier: 75676226

GI number: 75676226

Start: 2226414

End: 2226977

Strand: Direct

Name: ydjA [H]

Synonym: Nwi_2036

Alternate gene names: 75676226

Gene position: 2226414-2226977 (Clockwise)

Preceding gene: 75676225

Following gene: 75676235

Centisome position: 65.44

GC content: 61.52

Gene sequence:

>564_bases
ATGTCCGAGATCATCGACTTTCTACGTACCCGCCGCTCGGTCAAGCCGCGCGAAATGAGCCAGCCAGCTCCCTCGCCTGA
AGAGATCGAGACCATTCTCACCATCGGCGCGCGCGTTCCCGATCACGGCAAGATCGCGCCGTGGCGGTTCATCGTGTTCG
AAGGCGACGGACGCGTCCGCGCCGGCGACGTCATCGCCAGTGTCTACGCGCGCAAGAATCCATCGGCTCCACAGGAAGAG
ATCGAAATCGAAAAGCGCCAACTCATGGAGGCGCCGCTGGTGATCGGCGTGGTGAGTTGCATCAAGCCGCACCCGAAAGT
GCCGTCGTGGGAACAGGTTCTGTCGGCGGGCGCAAGCGCCATGAACATCGTCACGGCGGTCACCGCGCTCGGCTATGGCG
CAAACTGGCTGACAGGCTGGTTCGCCTACGATCGCGACATACTCGACGGCCTCGGTTTGAAGCCGGACGAAAGATTCGCG
GGCTTTATCCATATCGGCACGCCGACCAAACCCAGCAAGGACCGGCCTCGCCCCAACCTGTCGGATATCGTTTCGCGATT
TTAA

Upstream 100 bases:

>100_bases
CAACACAGTTGAACCTGACTCTGGCAGTTCGCAAGCAATCGCAATCGCGCCGCCTCTCATACGAACCGAGCAGACGGCGG
CAAGTTCAACGAAAGCAGCC

Downstream 100 bases:

>100_bases
AGCATGATCCGATAAAGTGAATCGGACCACGCTCTGGAGATTATGCTTCGCTCCAGAACGCTATAGAGCACGACGGATTT
GCATCAAATCAACGCGGCTA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSEIIDFLRTRRSVKPREMSQPAPSPEEIETILTIGARVPDHGKIAPWRFIVFEGDGRVRAGDVIASVYARKNPSAPQEE
IEIEKRQLMEAPLVIGVVSCIKPHPKVPSWEQVLSAGASAMNIVTAVTALGYGANWLTGWFAYDRDILDGLGLKPDERFA
GFIHIGTPTKPSKDRPRPNLSDIVSRF

Sequences:

>Translated_187_residues
MSEIIDFLRTRRSVKPREMSQPAPSPEEIETILTIGARVPDHGKIAPWRFIVFEGDGRVRAGDVIASVYARKNPSAPQEE
IEIEKRQLMEAPLVIGVVSCIKPHPKVPSWEQVLSAGASAMNIVTAVTALGYGANWLTGWFAYDRDILDGLGLKPDERFA
GFIHIGTPTKPSKDRPRPNLSDIVSRF
>Mature_186_residues
SEIIDFLRTRRSVKPREMSQPAPSPEEIETILTIGARVPDHGKIAPWRFIVFEGDGRVRAGDVIASVYARKNPSAPQEEI
EIEKRQLMEAPLVIGVVSCIKPHPKVPSWEQVLSAGASAMNIVTAVTALGYGANWLTGWFAYDRDILDGLGLKPDERFAG
FIHIGTPTKPSKDRPRPNLSDIVSRF

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=188, Percent_Identity=32.4468085106383, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20701; Mature: 20570

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIIDFLRTRRSVKPREMSQPAPSPEEIETILTIGARVPDHGKIAPWRFIVFEGDGRVR
CHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEE
AGDVIASVYARKNPSAPQEEIEIEKRQLMEAPLVIGVVSCIKPHPKVPSWEQVLSAGASA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHH
MNIVTAVTALGYGANWLTGWFAYDRDILDGLGLKPDERFAGFIHIGTPTKPSKDRPRPNL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCH
SDIVSRF
HHHHHCC
>Mature Secondary Structure 
SEIIDFLRTRRSVKPREMSQPAPSPEEIETILTIGARVPDHGKIAPWRFIVFEGDGRVR
HHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEE
AGDVIASVYARKNPSAPQEEIEIEKRQLMEAPLVIGVVSCIKPHPKVPSWEQVLSAGASA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHH
MNIVTAVTALGYGANWLTGWFAYDRDILDGLGLKPDERFAGFIHIGTPTKPSKDRPRPNL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCH
SDIVSRF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]