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The map label for this gene is radA [H]

Identifier: 75676205

GI number: 75676205

Start: 2205207

End: 2206667

Strand: Direct

Name: radA [H]

Synonym: Nwi_2015

Alternate gene names: 75676205

Gene position: 2205207-2206667 (Clockwise)

Preceding gene: 75676204

Following gene: 75676206

Centisome position: 64.82

GC content: 66.67

Gene sequence:

>1461_bases
ATGGCTAAATCCGCCCTCTCCTTCGTCTGCCAGAACTGCGGCGCGGCCTATAACCGCTGGCAGGGAAAGTGTGACGGCTG
CGGCGAATGGAATACGCTGGCCGAGGAGGATATCACCGGCGCGACGACGATGCCGGTCAGCGTGCGTTCCAGGCGCAAGG
GCCGGCTGTTCACGCTGGAGACGCTGACGGGCAAGACGCAGGACGCGCCGCGCCTCTCCTCCGGCATGGCCGAACTTGAT
CGCGTGACCGGCGGCGGCTTCGTGCGCGGCTCCGTCCTTCTGGTCGGCGGCGATCCGGGAATTGGCAAATCGACCCTCCT
TACGCAAGCGACGAGCCTTTTGGCGCGCTCCGGCCATCGCGCGGTCTATATCTCGGGCGAGGAAGCGGTCGCGCAGGTGC
GATTGCGCGCCGAGCGCCTTGGGCTTGCCGACGCGCCGGTGCAACTGGCGGCGGAAACCTCGGTTGAGGATATCGTCGCC
ACCCTGTCCGAAGGCACGGTGCCGCGTCTCGTGGTGATCGACTCGATCCAGACCATGTGGACCGACACGGTGGAATCCGC
GCCGGGAACGGTCACGCAGGTTCGCGCCTCGGCGCAGGCGCTCATTCGTTTCGCCAAAAAATCCGGGGCGGCCCTGATCC
TGGTGGGCCATGTCACCAAGGACGGCCAGATCGCCGGCCCCCGCGTGGTCGAGCACATGGTCGACGCCGTGCTGTCGTTC
GAAGGTGAAGGCTCGCAGCAATTTCGTATTCTGCGAGCGGTGAAGAACCGGTTCGGTCCCACCGACGAGATCGGCGTCTT
CGAGATGACGGGACTGGGCCTGCGCGAGGTCTCCAACCCGTCCGAACTCTTCCTGTCGGAGCGCGACCTCGGCAGTCCGG
GCACGGCGGTATTCGCGGGCATCGAGGGCACAAGGCCGGTGCTGGTGGAATTACAGGCGCTGGTGGCGCCGACCTCGCTC
GGCACGCCGCGACGCGCGGTCGTCGGCTGGGATTCGAGCCGGCTATCGATGGTGCTGGCGGTTCTCGAAGCGCATTGCGG
GGTCAAGCTTTCGGGACACGACGTTTATTTCAATGTAGCGGGCGGTCTGCGCATCAACGAGCCGGCCGCCGATCTTGCCG
CGGCCGCGGCGCTGGTGTCATCGCTGACAAACGCCCAGCTCCCGACCGACGCGGTCTATTTCGGCGAGATTTCGCTATCC
GGCGCGGTCAGGCCGGTGGCGCAAACCACCGCGCGGCTCAAGGAAGCCGCCAAGCTCGGATTCGGACGTGCCGTGCTGCC
GGAATCGGCCCGTGGAGATATCGGCGGCGATGCCGGTCTTTCCCTCGATGCGGTCGCCGGATTGACCACGCTGGTGGCGG
ATATCGCCGCGCGCGGTCAGGCCCGCCCTGGCAGCCCTGGCAAGCGCACGGACCCGGAGAAAAATGCCACACCCGGCCAA
AACCGTCGTCAGGGAGGCTAA

Upstream 100 bases:

>100_bases
TTCGGCACCATTGGTTACGAGGTACTCACCAGCCTCGGCGGCCGCTACCACCGGATCTATAAAGGCGGCCCGGCCGAGCC
TCGAACCTGACACCCGATCA

Downstream 100 bases:

>100_bases
AGCGGCGTGACGTTGCGGCCTGCCGCCGCTATACATCCCGCGCCAGCCGCAAGGCTAGAGCATGATCCCGAAAAGTGGAA
ACCGGTTTTCGGAAAAGATC

Product: DNA repair protein RadA

Products: NA

Alternate protein names: DNA repair protein sms homolog [H]

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MAKSALSFVCQNCGAAYNRWQGKCDGCGEWNTLAEEDITGATTMPVSVRSRRKGRLFTLETLTGKTQDAPRLSSGMAELD
RVTGGGFVRGSVLLVGGDPGIGKSTLLTQATSLLARSGHRAVYISGEEAVAQVRLRAERLGLADAPVQLAAETSVEDIVA
TLSEGTVPRLVVIDSIQTMWTDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVLSF
EGEGSQQFRILRAVKNRFGPTDEIGVFEMTGLGLREVSNPSELFLSERDLGSPGTAVFAGIEGTRPVLVELQALVAPTSL
GTPRRAVVGWDSSRLSMVLAVLEAHCGVKLSGHDVYFNVAGGLRINEPAADLAAAAALVSSLTNAQLPTDAVYFGEISLS
GAVRPVAQTTARLKEAAKLGFGRAVLPESARGDIGGDAGLSLDAVAGLTTLVADIAARGQARPGSPGKRTDPEKNATPGQ
NRRQGG

Sequences:

>Translated_486_residues
MAKSALSFVCQNCGAAYNRWQGKCDGCGEWNTLAEEDITGATTMPVSVRSRRKGRLFTLETLTGKTQDAPRLSSGMAELD
RVTGGGFVRGSVLLVGGDPGIGKSTLLTQATSLLARSGHRAVYISGEEAVAQVRLRAERLGLADAPVQLAAETSVEDIVA
TLSEGTVPRLVVIDSIQTMWTDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVLSF
EGEGSQQFRILRAVKNRFGPTDEIGVFEMTGLGLREVSNPSELFLSERDLGSPGTAVFAGIEGTRPVLVELQALVAPTSL
GTPRRAVVGWDSSRLSMVLAVLEAHCGVKLSGHDVYFNVAGGLRINEPAADLAAAAALVSSLTNAQLPTDAVYFGEISLS
GAVRPVAQTTARLKEAAKLGFGRAVLPESARGDIGGDAGLSLDAVAGLTTLVADIAARGQARPGSPGKRTDPEKNATPGQ
NRRQGG
>Mature_485_residues
AKSALSFVCQNCGAAYNRWQGKCDGCGEWNTLAEEDITGATTMPVSVRSRRKGRLFTLETLTGKTQDAPRLSSGMAELDR
VTGGGFVRGSVLLVGGDPGIGKSTLLTQATSLLARSGHRAVYISGEEAVAQVRLRAERLGLADAPVQLAAETSVEDIVAT
LSEGTVPRLVVIDSIQTMWTDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVLSFE
GEGSQQFRILRAVKNRFGPTDEIGVFEMTGLGLREVSNPSELFLSERDLGSPGTAVFAGIEGTRPVLVELQALVAPTSLG
TPRRAVVGWDSSRLSMVLAVLEAHCGVKLSGHDVYFNVAGGLRINEPAADLAAAAALVSSLTNAQLPTDAVYFGEISLSG
AVRPVAQTTARLKEAAKLGFGRAVLPESARGDIGGDAGLSLDAVAGLTTLVADIAARGQARPGSPGKRTDPEKNATPGQN
RRQGG

Specific function: May play a role in the repair of endogenous alkylation damage [H]

COG id: COG1066

COG function: function code O; Predicted ATP-dependent serine protease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family. RadA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790850, Length=428, Percent_Identity=46.9626168224299, Blast_Score=394, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR020588
- InterPro:   IPR004504
- InterPro:   IPR020568 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 50646; Mature: 50515

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSALSFVCQNCGAAYNRWQGKCDGCGEWNTLAEEDITGATTMPVSVRSRRKGRLFTLE
CCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCHHHCCCCCEECCEEHHCCCCCCEEEEE
TLTGKTQDAPRLSSGMAELDRVTGGGFVRGSVLLVGGDPGIGKSTLLTQATSLLARSGHR
ECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
AVYISGEEAVAQVRLRAERLGLADAPVQLAAETSVEDIVATLSEGTVPRLVVIDSIQTMW
EEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEECCHHHHH
TDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVLSF
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHC
EGEGSQQFRILRAVKNRFGPTDEIGVFEMTGLGLREVSNPSELFLSERDLGSPGTAVFAG
CCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHCCCHHHHHEECCCCCCCCCEEEEC
IEGTRPVLVELQALVAPTSLGTPRRAVVGWDSSRLSMVLAVLEAHCGVKLSGHDVYFNVA
CCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEECCCEEEEEEC
GGLRINEPAADLAAAAALVSSLTNAQLPTDAVYFGEISLSGAVRPVAQTTARLKEAAKLG
CCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHC
FGRAVLPESARGDIGGDAGLSLDAVAGLTTLVADIAARGQARPGSPGKRTDPEKNATPGQ
CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
NRRQGG
CCCCCC
>Mature Secondary Structure 
AKSALSFVCQNCGAAYNRWQGKCDGCGEWNTLAEEDITGATTMPVSVRSRRKGRLFTLE
CHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCHHHCCCCCEECCEEHHCCCCCCEEEEE
TLTGKTQDAPRLSSGMAELDRVTGGGFVRGSVLLVGGDPGIGKSTLLTQATSLLARSGHR
ECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
AVYISGEEAVAQVRLRAERLGLADAPVQLAAETSVEDIVATLSEGTVPRLVVIDSIQTMW
EEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEECCHHHHH
TDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVLSF
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHC
EGEGSQQFRILRAVKNRFGPTDEIGVFEMTGLGLREVSNPSELFLSERDLGSPGTAVFAG
CCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHCCCHHHHHEECCCCCCCCCEEEEC
IEGTRPVLVELQALVAPTSLGTPRRAVVGWDSSRLSMVLAVLEAHCGVKLSGHDVYFNVA
CCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEECCCEEEEEEC
GGLRINEPAADLAAAAALVSSLTNAQLPTDAVYFGEISLSGAVRPVAQTTARLKEAAKLG
CCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHC
FGRAVLPESARGDIGGDAGLSLDAVAGLTTLVADIAARGQARPGSPGKRTDPEKNATPGQ
CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
NRRQGG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA