| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is ate [H]
Identifier: 75676102
GI number: 75676102
Start: 2096210
End: 2096983
Strand: Direct
Name: ate [H]
Synonym: Nwi_1911
Alternate gene names: 75676102
Gene position: 2096210-2096983 (Clockwise)
Preceding gene: 75676101
Following gene: 75676115
Centisome position: 61.62
GC content: 61.11
Gene sequence:
>774_bases GTGACCCAGCACTCGCGTGACACACCGCAATTCTATCTGACGGCGCCTTCGCCGTGTCCGTATCTGCCCGATCGCAGCGA ACGCAAGGTATTTACCCATCTGGTCGGCGAAAAGGCGGGCGAACTCAACGATCTGCTCACCCATGGCGGTTTTCGCCGCA GCCAGTCGATCGCCTACCGTCCGGCGTGCGACCAGTGCCGCGCCTGCGTTTCCGTACGGGTCATCGCTGATGAGTTTCAG TTGTCGCGCGGGGCTCGCAGGGTGCTGGCGCGCAACGCCGACATCACCGGCAGCCTGCGTGCCGCAACGCCGACGTCAGA GCAATATTCGATATTCCGCGCCTATCTGGACCAGAGACATCGCCACGGCGGCATGGCCGATATGACGGTGCTGGATTACG CGATGATGGTGGAAGACAGCCACGTCGAGACCCGCATCATCGAATATCGCCGGCGCGGCGCGGATCGCGTCGATAACAAA CGCGGCGATCTTGTGGGAGTGGCGCTCACCGATGTGTTGAGCGACGGACTCTCCATGGTCTATTCGTTCTTCGATCCTTC AGAGCAGAACCGTTCGTTCGGCACCTTCATGATCCTCGATCACATATCCCGCGCGCGGCAACTGGGCCTGCCCTATGTGT ATCTTGGCTACTGGATCGAGGGATCGCGGAAGATGGATTACAAGGGCCGCTTCCTGCCACAGCAGCGCCTTGCGCCCACG GGCTGGCTGCGTGTCGATGCTGACGGCGAAACGAAGCACGAGACGACAGAATAG
Upstream 100 bases:
>100_bases ACCATCTGGAAGCTATTGATATGGCGGCAACCCGGATTGACGGTCAGCCTCGGGAGCGCGATGCTGGAACTCAATCTGTT TCGGAGACTGACAAGGCGCC
Downstream 100 bases:
>100_bases AGCAGATCAGCCTGCGTCCAATGCTGCGGTCTATCCGGCGAACGTGTCCGCCAGCAGCTTCACATTCAGGATCACGATCA GGCCGGCAACGATCCATGCT
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTQHSRDTPQFYLTAPSPCPYLPDRSERKVFTHLVGEKAGELNDLLTHGGFRRSQSIAYRPACDQCRACVSVRVIADEFQ LSRGARRVLARNADITGSLRAATPTSEQYSIFRAYLDQRHRHGGMADMTVLDYAMMVEDSHVETRIIEYRRRGADRVDNK RGDLVGVALTDVLSDGLSMVYSFFDPSEQNRSFGTFMILDHISRARQLGLPYVYLGYWIEGSRKMDYKGRFLPQQRLAPT GWLRVDADGETKHETTE
Sequences:
>Translated_257_residues MTQHSRDTPQFYLTAPSPCPYLPDRSERKVFTHLVGEKAGELNDLLTHGGFRRSQSIAYRPACDQCRACVSVRVIADEFQ LSRGARRVLARNADITGSLRAATPTSEQYSIFRAYLDQRHRHGGMADMTVLDYAMMVEDSHVETRIIEYRRRGADRVDNK RGDLVGVALTDVLSDGLSMVYSFFDPSEQNRSFGTFMILDHISRARQLGLPYVYLGYWIEGSRKMDYKGRFLPQQRLAPT GWLRVDADGETKHETTE >Mature_256_residues TQHSRDTPQFYLTAPSPCPYLPDRSERKVFTHLVGEKAGELNDLLTHGGFRRSQSIAYRPACDQCRACVSVRVIADEFQL SRGARRVLARNADITGSLRAATPTSEQYSIFRAYLDQRHRHGGMADMTVLDYAMMVEDSHVETRIIEYRRRGADRVDNKR GDLVGVALTDVLSDGLSMVYSFFDPSEQNRSFGTFMILDHISRARQLGLPYVYLGYWIEGSRKMDYKGRFLPQQRLAPTG WLRVDADGETKHETTE
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 29306; Mature: 29175
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHSRDTPQFYLTAPSPCPYLPDRSERKVFTHLVGEKAGELNDLLTHGGFRRSQSIAYR CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEC PACDQCRACVSVRVIADEFQLSRGARRVLARNADITGSLRAATPTSEQYSIFRAYLDQRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHH RHGGMADMTVLDYAMMVEDSHVETRIIEYRRRGADRVDNKRGDLVGVALTDVLSDGLSMV HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHH YSFFDPSEQNRSFGTFMILDHISRARQLGLPYVYLGYWIEGSRKMDYKGRFLPQQRLAPT HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHCCCC GWLRVDADGETKHETTE CEEEEECCCCCCCCCCC >Mature Secondary Structure TQHSRDTPQFYLTAPSPCPYLPDRSERKVFTHLVGEKAGELNDLLTHGGFRRSQSIAYR CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEC PACDQCRACVSVRVIADEFQLSRGARRVLARNADITGSLRAATPTSEQYSIFRAYLDQRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHH RHGGMADMTVLDYAMMVEDSHVETRIIEYRRRGADRVDNKRGDLVGVALTDVLSDGLSMV HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHH YSFFDPSEQNRSFGTFMILDHISRARQLGLPYVYLGYWIEGSRKMDYKGRFLPQQRLAPT HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHCCCC GWLRVDADGETKHETTE CEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA