| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675977
Identifier: 75675977
GI number: 75675977
Start: 1955016
End: 1956284
Strand: Direct
Name: 75675977
Synonym: Nwi_1785
Alternate gene names: NA
Gene position: 1955016-1956284 (Clockwise)
Preceding gene: 75675974
Following gene: 75675978
Centisome position: 57.47
GC content: 63.44
Gene sequence:
>1269_bases ATGGCGAAGAATCAGAACGGCTTAGCCGAAAGCACAGGGGCCGATGAAAGCAGCGGCCGGCCGGCCGGCTTTCTTGCCGA TGAGGATGGATTCGACCGCCGCACCATATGGCGGCTCGGATCCTGGGGCGTCGGGTCCATCGGAGCCGTCATCGTCGCCC TCCTAGCATACAATTCCGGAGCCGCTCTCCGGTCTCGACCGCTCGCCGGTGCCGACCTCGCAAAGCCATCGCCGCAGTTG GAGATCGCGCAAGCGGCCGAGCGGAAAATCGAACGTCTTTCGTCCGCCATCGACACGTTGAACAGCGATCGCGAGCGGCT GTTCGCCCGTCTCGCCGTCCTTGAGCAAGGTTTCGAATCCGTCACCGGCTCCATAAGCCGGAAGGCGTCGCAGACCGACG CTATAGCAACGACCTCGACGCCGGCGGCCAGTGAGCCCTATCCGGTCAGAGAACCTGACTCACCGGGTCAAGACGCCTTG ACAGCCGCAAATGCGTCCACGGATGCGCCACTCTCCGCACCGGCCGCTTTCATCACCACCGCCGCAGCGGCGGCGGTGAA GCCTCCGATCGCCGCTTCTTCTCCCGTAGCTGCATCACCGCCCGCGATAGCCGCACATGATCCCACCGCAACAATGCCTG GCGGACAGGGTGAAACGGTCACGCTCGGGACCGCGAAATCAGAGCTTGAAAAAAACCTTCACCACCACAAGGAGGCGCAG ATCGTTGCCGCATCCATTCCCCCGATCGCTGATGCGCCGCAACCACCTTCCCCCGCTCAGGCATCGTCCTCTGAAACGGT GAAAGACACGAGCCCCGTCCCGGTGCCGCGCACCGAATTCGGCATCGATCTCGGAAGCGCCGCGTCGATCAAAGGTTTGC GAACGCTCTGGCAAAGCCTTCTGAAATCAGAGCCGAAGGAATTGACGTCGCTGCATCCGATCATCGTGCTGAAGGAAACC AGCAACGGCAACGGCATTCAGATGCGTCTGGTCGCCGGGCCGCTCACCGATGCGGCGACTGCCGCCAGGATCTGCGCGGT GCTGTCCGAGGACGGCCAAACCTGCGGCACCACCGTATTCGACGGCCAGCGCCTCGCCATGAACGAAGATGGCAAGGACA GCGCCGTTACCCCCGCGACAAAAAAACCTAAGACACCGCCTGCGTCGCGACGTCGGCCTGCCCGGAAATCGACGCGAGTC GAGGAGCCGGCACAGCCCCCGCCACCACCTCCGAGGCCGGCAGCATTCAGCCCATTCTTTTCACGCTGA
Upstream 100 bases:
>100_bases TTTTTTCTCGAAGCTGAAAACCGGCCGGCTTCCCTGAGATCAGGCAGGTTTCCTGCTAACATTCCGCCATGATTCGGAAC GGGGGTCCGGCATCATCATT
Downstream 100 bases:
>100_bases CTCCATCCGGCGGGGACCGGATTCCGGGTTGTCCGCTCTACCGATCCGGATCATATTCACGCGATGAAAAAAGACCCGTT CCGACTGACGCCTTATCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MAKNQNGLAESTGADESSGRPAGFLADEDGFDRRTIWRLGSWGVGSIGAVIVALLAYNSGAALRSRPLAGADLAKPSPQL EIAQAAERKIERLSSAIDTLNSDRERLFARLAVLEQGFESVTGSISRKASQTDAIATTSTPAASEPYPVREPDSPGQDAL TAANASTDAPLSAPAAFITTAAAAAVKPPIAASSPVAASPPAIAAHDPTATMPGGQGETVTLGTAKSELEKNLHHHKEAQ IVAASIPPIADAPQPPSPAQASSSETVKDTSPVPVPRTEFGIDLGSAASIKGLRTLWQSLLKSEPKELTSLHPIIVLKET SNGNGIQMRLVAGPLTDAATAARICAVLSEDGQTCGTTVFDGQRLAMNEDGKDSAVTPATKKPKTPPASRRRPARKSTRV EEPAQPPPPPPRPAAFSPFFSR
Sequences:
>Translated_422_residues MAKNQNGLAESTGADESSGRPAGFLADEDGFDRRTIWRLGSWGVGSIGAVIVALLAYNSGAALRSRPLAGADLAKPSPQL EIAQAAERKIERLSSAIDTLNSDRERLFARLAVLEQGFESVTGSISRKASQTDAIATTSTPAASEPYPVREPDSPGQDAL TAANASTDAPLSAPAAFITTAAAAAVKPPIAASSPVAASPPAIAAHDPTATMPGGQGETVTLGTAKSELEKNLHHHKEAQ IVAASIPPIADAPQPPSPAQASSSETVKDTSPVPVPRTEFGIDLGSAASIKGLRTLWQSLLKSEPKELTSLHPIIVLKET SNGNGIQMRLVAGPLTDAATAARICAVLSEDGQTCGTTVFDGQRLAMNEDGKDSAVTPATKKPKTPPASRRRPARKSTRV EEPAQPPPPPPRPAAFSPFFSR >Mature_421_residues AKNQNGLAESTGADESSGRPAGFLADEDGFDRRTIWRLGSWGVGSIGAVIVALLAYNSGAALRSRPLAGADLAKPSPQLE IAQAAERKIERLSSAIDTLNSDRERLFARLAVLEQGFESVTGSISRKASQTDAIATTSTPAASEPYPVREPDSPGQDALT AANASTDAPLSAPAAFITTAAAAAVKPPIAASSPVAASPPAIAAHDPTATMPGGQGETVTLGTAKSELEKNLHHHKEAQI VAASIPPIADAPQPPSPAQASSSETVKDTSPVPVPRTEFGIDLGSAASIKGLRTLWQSLLKSEPKELTSLHPIIVLKETS NGNGIQMRLVAGPLTDAATAARICAVLSEDGQTCGTTVFDGQRLAMNEDGKDSAVTPATKKPKTPPASRRRPARKSTRVE EPAQPPPPPPRPAAFSPFFSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43675; Mature: 43544
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNQNGLAESTGADESSGRPAGFLADEDGFDRRTIWRLGSWGVGSIGAVIVALLAYNSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCC AALRSRPLAGADLAKPSPQLEIAQAAERKIERLSSAIDTLNSDRERLFARLAVLEQGFES CHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VTGSISRKASQTDAIATTSTPAASEPYPVREPDSPGQDALTAANASTDAPLSAPAAFITT HHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHH AAAAAVKPPIAASSPVAASPPAIAAHDPTATMPGGQGETVTLGTAKSELEKNLHHHKEAQ HHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHE IVAASIPPIADAPQPPSPAQASSSETVKDTSPVPVPRTEFGIDLGSAASIKGLRTLWQSL EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH LKSEPKELTSLHPIIVLKETSNGNGIQMRLVAGPLTDAATAARICAVLSEDGQTCGTTVF HHCCHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEE DGQRLAMNEDGKDSAVTPATKKPKTPPASRRRPARKSTRVEEPAQPPPPPPRPAAFSPFF CCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH SR CC >Mature Secondary Structure AKNQNGLAESTGADESSGRPAGFLADEDGFDRRTIWRLGSWGVGSIGAVIVALLAYNSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCC AALRSRPLAGADLAKPSPQLEIAQAAERKIERLSSAIDTLNSDRERLFARLAVLEQGFES CHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VTGSISRKASQTDAIATTSTPAASEPYPVREPDSPGQDALTAANASTDAPLSAPAAFITT HHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHH AAAAAVKPPIAASSPVAASPPAIAAHDPTATMPGGQGETVTLGTAKSELEKNLHHHKEAQ HHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHE IVAASIPPIADAPQPPSPAQASSSETVKDTSPVPVPRTEFGIDLGSAASIKGLRTLWQSL EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH LKSEPKELTSLHPIIVLKETSNGNGIQMRLVAGPLTDAATAARICAVLSEDGQTCGTTVF HHCCHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEE DGQRLAMNEDGKDSAVTPATKKPKTPPASRRRPARKSTRVEEPAQPPPPPPRPAAFSPFF CCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH SR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA