| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675963
Identifier: 75675963
GI number: 75675963
Start: 1941430
End: 1942404
Strand: Direct
Name: 75675963
Synonym: Nwi_1771
Alternate gene names: NA
Gene position: 1941430-1942404 (Clockwise)
Preceding gene: 75675957
Following gene: 75675966
Centisome position: 57.07
GC content: 65.13
Gene sequence:
>975_bases ATGGCCAGAAAGTCGCGGAAAACCAGCCTTCGAAAGCCCCCTCTCCAAACGCCCGGGGCCCGTTCCGTTCCTCGGGCCGG CGCGACGAAAGGTCCGAAAGCGGCCGCGAGGCGAGATGCCGCGGACCGGATCGCCCGCGCTCTCGAAACGATCGCCGCCG CCATGACCGCCGCCACCGAGCAGATCGACAATCACGCCGTCATGACCCGAGCCGATGCATTCGTCTGGCATCCCGACGGT CGATTGACGCCGGTTTCGCAGGTCAGCCGCGTCGATCTCACCCTGCTCAAGGGCATCGACCGGATGCGCGATATCCTGAT GGAAAACACTGCCCGCTTCGCCAGGGGCCTGCCCGCGAACAACGCCCTGCTCTGGGGTGCGCGCGGCATGGGCAAGTCGT CGCTGGTGAAGGCGGCACATGCCAGCATCAACGCCGAGGCCGGCGGACGGCTCAAGCTGATCGAAATTCACCGCGAGGAT ATCGAGAGCCTGCCCGGCCTGATGGAACTGCTTCGCTCATCCGAGTTTCGTTTCATCGTCTTCTGCGACGACCTGTCCTT CGACGGCAATGACGCTTCATACAAATCGCTGAAGGCCGCCCTCGAGGGCGGCATCGAGGGGCGGCCCGACAACGTCATCC TGTACGCGACGTCAAACCGCCGTCATCTGCTGGCGCGCGACATGATCGAGAACGAGCGATCGACGGCGATCAATCCCGGC GAGGCCGTCGAGGAAAAGGTTTCGCTGTCCGACCGCTTCGGCCTCTGGCTCGGCTTTCACCGCTGTAGCCAGGATGAGTA TCTCGCGATGGTGCGCGGCTATTGCTCCCACTTCGGCATCAGGCTCGACGACGCCGAACTGGAGCGGGAGGCGCTGGAAT GGTCAGCCACGCGCGGCTCGCGTTCCGGCCGGGTTGCCTGGCAATTCACGCAGGAGCTTGCGGGACGGCTCGGCGTGCGG CTCGCGGCGAGATAG
Upstream 100 bases:
>100_bases CCAATTGCAACGCCGCCAGCCCCTTGATCGAGCCACATTATTCCGCGGCTTGCGGGAGCGCGGTCGCCCCGCTAAGGGTG CGCGGTCGGGAAAGACAAAG
Downstream 100 bases:
>100_bases CCTTCGAGCTTATTCTGCGGATGTAGCGCGGCACAGTTGATGCGCTGCTGAACGGGGACCGCCTACGCGCAGCGATCGTT TCGGTCCCGGATCGGCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MARKSRKTSLRKPPLQTPGARSVPRAGATKGPKAAARRDAADRIARALETIAAAMTAATEQIDNHAVMTRADAFVWHPDG RLTPVSQVSRVDLTLLKGIDRMRDILMENTARFARGLPANNALLWGARGMGKSSLVKAAHASINAEAGGRLKLIEIHRED IESLPGLMELLRSSEFRFIVFCDDLSFDGNDASYKSLKAALEGGIEGRPDNVILYATSNRRHLLARDMIENERSTAINPG EAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVRGYCSHFGIRLDDAELEREALEWSATRGSRSGRVAWQFTQELAGRLGVR LAAR
Sequences:
>Translated_324_residues MARKSRKTSLRKPPLQTPGARSVPRAGATKGPKAAARRDAADRIARALETIAAAMTAATEQIDNHAVMTRADAFVWHPDG RLTPVSQVSRVDLTLLKGIDRMRDILMENTARFARGLPANNALLWGARGMGKSSLVKAAHASINAEAGGRLKLIEIHRED IESLPGLMELLRSSEFRFIVFCDDLSFDGNDASYKSLKAALEGGIEGRPDNVILYATSNRRHLLARDMIENERSTAINPG EAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVRGYCSHFGIRLDDAELEREALEWSATRGSRSGRVAWQFTQELAGRLGVR LAAR >Mature_323_residues ARKSRKTSLRKPPLQTPGARSVPRAGATKGPKAAARRDAADRIARALETIAAAMTAATEQIDNHAVMTRADAFVWHPDGR LTPVSQVSRVDLTLLKGIDRMRDILMENTARFARGLPANNALLWGARGMGKSSLVKAAHASINAEAGGRLKLIEIHREDI ESLPGLMELLRSSEFRFIVFCDDLSFDGNDASYKSLKAALEGGIEGRPDNVILYATSNRRHLLARDMIENERSTAINPGE AVEEKVSLSDRFGLWLGFHRCSQDEYLAMVRGYCSHFGIRLDDAELEREALEWSATRGSRSGRVAWQFTQELAGRLGVRL AAR
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35751; Mature: 35620
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKSRKTSLRKPPLQTPGARSVPRAGATKGPKAAARRDAADRIARALETIAAAMTAATE CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIDNHAVMTRADAFVWHPDGRLTPVSQVSRVDLTLLKGIDRMRDILMENTARFARGLPAN HHCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NALLWGARGMGKSSLVKAAHASINAEAGGRLKLIEIHREDIESLPGLMELLRSSEFRFIV CEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCEEEE FCDDLSFDGNDASYKSLKAALEGGIEGRPDNVILYATSNRRHLLARDMIENERSTAINPG EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCH EAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVRGYCSHFGIRLDDAELEREALEWSATRGS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCC RSGRVAWQFTQELAGRLGVRLAAR CCCCCHHHHHHHHHHHHCCEECCC >Mature Secondary Structure ARKSRKTSLRKPPLQTPGARSVPRAGATKGPKAAARRDAADRIARALETIAAAMTAATE CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIDNHAVMTRADAFVWHPDGRLTPVSQVSRVDLTLLKGIDRMRDILMENTARFARGLPAN HHCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NALLWGARGMGKSSLVKAAHASINAEAGGRLKLIEIHREDIESLPGLMELLRSSEFRFIV CEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCEEEE FCDDLSFDGNDASYKSLKAALEGGIEGRPDNVILYATSNRRHLLARDMIENERSTAINPG EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCH EAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVRGYCSHFGIRLDDAELEREALEWSATRGS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCC RSGRVAWQFTQELAGRLGVRLAAR CCCCCHHHHHHHHHHHHCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA