| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is adhI [H]
Identifier: 75675931
GI number: 75675931
Start: 1900674
End: 1901801
Strand: Direct
Name: adhI [H]
Synonym: Nwi_1739
Alternate gene names: 75675931
Gene position: 1900674-1901801 (Clockwise)
Preceding gene: 75675930
Following gene: 75675935
Centisome position: 55.87
GC content: 64.18
Gene sequence:
>1128_bases ATGCACGTCCGCGCCGCAGTCGCCCTTGCCGCCGGCAAGCCGCTTGAAGTCACGACCGTGGAACTCGACGGCCCACGCGA TGGTGAGGTCATGGTCGAGATCAAGGCGGCCGGCGTCTGCCACACCGACGAGTTCACCTTGTCCGGCGCGGATCCGGAAG GGTTGTTTCCGGCCATACTCGGCCATGAGGGCGCCGGCGTGGTGGTCGATGTCGGCAAGGGCGTGACCTCGGTGAAGAAA GGCGATCACGTTATTCCGCTCTACACGCCCGAATGCCGGCAATGCCCGTCCTGCCTGTCGCGCAAGACCAATCTGTGCAC GGCCATTCGCGCGACCCAAGGCCAGGGGTTAATGCCGGACGGCACCTCGCGCTTCTCCTTCGACGGCAAGCCGCTCCATC ACTACATGGGCACCTCGACCTTCGCCAACTACACGGTGCTGCCGGAGATCGCGGTCGCGAAGATCCGCGAAGACGCTCCG TTCGACAAGGTCTGCTACATCGGCTGCGGCGTCACTACCGGCATCGGCGCGGTGATCAACACCGCGAAGGTCGAACCCGG CGCCAAGGCGATCGTGTTCGGCCTCGGCGGCATCGGGCTGAACGTCCTGCAAGGGTTGAGGCTCGCCGGCGCCGACATGA TCATCGGCGTGGACATCAACGACGATCGCAAGGCGTGGGGCGAGCGCTTCGGCATGACGCACTTCGTCAATCCCACGGAT GTCGGGAAGGAACTCGTCCCTTACCTTGTCGATATGACGAAGTCCGGCGCTGATCAGATCGGCGGCGCGGATTACACGTT CGACTGCACGGGCAATGTGAAGGTGATGCGCCAGGCGCTGGAATCCTGTCACCGTGGCTGGGGACAGTCGATCGTGATCG GCGTCGCCCCCGCCGGCGCGGAGATCGCGACGCGGCCGTTCCAACTCGTCACAGGCCGCGTATGGAAAGGCACGGCGTTC GGCGGCGCGCGCGGCCGCACCGATGTGCCGAAGATCGTAGACTGGTACATGCAGGGCAAGATCCAGATCGATCCGATGAT CACGCACGTCATGCCGCTCGACGACATCAACAGAGCGTTTGACCTGATGCGCAAAGGCGAATCGATCCGCGGCGTCGTCA CGTTCTGA
Upstream 100 bases:
>100_bases GCGGCGGCCGTCGTTGCGGCTTCGGAGGCACGACCGTATCCTGGGCGGCAACGCCCATTCCGTCGATGCTCTTTCAATTC CTGCCGGAGAAGAAGCCGCC
Downstream 100 bases:
>100_bases AAGAGACTTTCCGTTCCGCCGGAATCAGAAGCAAGGCTCTCTGATCTTGTTTTAAAGCGTTTTCCTCACGCGAACAGTTC ATCCATCCTTAGGGCTCAAG
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MHVRAAVALAAGKPLEVTTVELDGPRDGEVMVEIKAAGVCHTDEFTLSGADPEGLFPAILGHEGAGVVVDVGKGVTSVKK GDHVIPLYTPECRQCPSCLSRKTNLCTAIRATQGQGLMPDGTSRFSFDGKPLHHYMGTSTFANYTVLPEIAVAKIREDAP FDKVCYIGCGVTTGIGAVINTAKVEPGAKAIVFGLGGIGLNVLQGLRLAGADMIIGVDINDDRKAWGERFGMTHFVNPTD VGKELVPYLVDMTKSGADQIGGADYTFDCTGNVKVMRQALESCHRGWGQSIVIGVAPAGAEIATRPFQLVTGRVWKGTAF GGARGRTDVPKIVDWYMQGKIQIDPMITHVMPLDDINRAFDLMRKGESIRGVVTF
Sequences:
>Translated_375_residues MHVRAAVALAAGKPLEVTTVELDGPRDGEVMVEIKAAGVCHTDEFTLSGADPEGLFPAILGHEGAGVVVDVGKGVTSVKK GDHVIPLYTPECRQCPSCLSRKTNLCTAIRATQGQGLMPDGTSRFSFDGKPLHHYMGTSTFANYTVLPEIAVAKIREDAP FDKVCYIGCGVTTGIGAVINTAKVEPGAKAIVFGLGGIGLNVLQGLRLAGADMIIGVDINDDRKAWGERFGMTHFVNPTD VGKELVPYLVDMTKSGADQIGGADYTFDCTGNVKVMRQALESCHRGWGQSIVIGVAPAGAEIATRPFQLVTGRVWKGTAF GGARGRTDVPKIVDWYMQGKIQIDPMITHVMPLDDINRAFDLMRKGESIRGVVTF >Mature_375_residues MHVRAAVALAAGKPLEVTTVELDGPRDGEVMVEIKAAGVCHTDEFTLSGADPEGLFPAILGHEGAGVVVDVGKGVTSVKK GDHVIPLYTPECRQCPSCLSRKTNLCTAIRATQGQGLMPDGTSRFSFDGKPLHHYMGTSTFANYTVLPEIAVAKIREDAP FDKVCYIGCGVTTGIGAVINTAKVEPGAKAIVFGLGGIGLNVLQGLRLAGADMIIGVDINDDRKAWGERFGMTHFVNPTD VGKELVPYLVDMTKSGADQIGGADYTFDCTGNVKVMRQALESCHRGWGQSIVIGVAPAGAEIATRPFQLVTGRVWKGTAF GGARGRTDVPKIVDWYMQGKIQIDPMITHVMPLDDINRAFDLMRKGESIRGVVTF
Specific function: Oxidizes long-chain aliphatic alcohols, long-chain hydroxylated fatty acids and S-hydroxymethylglutathione (hmGSH) in increasing order of preference. Shows little or no activity with short-chain aliphatic alcohols [H]
COG id: COG1062
COG function: function code C; Zn-dependent alcohol dehydrogenases, class III
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily [H]
Homologues:
Organism=Homo sapiens, GI71565154, Length=373, Percent_Identity=58.9812332439678, Blast_Score=441, Evalue=1e-124, Organism=Homo sapiens, GI34577061, Length=375, Percent_Identity=44.5333333333333, Blast_Score=339, Evalue=3e-93, Organism=Homo sapiens, GI4501933, Length=375, Percent_Identity=44.2666666666667, Blast_Score=335, Evalue=5e-92, Organism=Homo sapiens, GI262073058, Length=376, Percent_Identity=44.1489361702128, Blast_Score=335, Evalue=6e-92, Organism=Homo sapiens, GI71743840, Length=376, Percent_Identity=44.1489361702128, Blast_Score=334, Evalue=8e-92, Organism=Homo sapiens, GI71565152, Length=380, Percent_Identity=44.7368421052632, Blast_Score=334, Evalue=9e-92, Organism=Homo sapiens, GI156523966, Length=373, Percent_Identity=43.4316353887399, Blast_Score=329, Evalue=2e-90, Organism=Homo sapiens, GI4501929, Length=375, Percent_Identity=43.4666666666667, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI4501939, Length=367, Percent_Identity=43.5967302452316, Blast_Score=324, Evalue=8e-89, Organism=Escherichia coli, GI1786552, Length=375, Percent_Identity=60, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI1788073, Length=370, Percent_Identity=26.2162162162162, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI226510992, Length=361, Percent_Identity=26.3157894736842, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082125, Length=389, Percent_Identity=24.1645244215938, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1790045, Length=383, Percent_Identity=24.2819843342037, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787863, Length=354, Percent_Identity=23.4463276836158, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI87081918, Length=361, Percent_Identity=26.8698060941828, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788075, Length=364, Percent_Identity=25.5494505494505, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786825, Length=373, Percent_Identity=23.3243967828418, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI25146526, Length=379, Percent_Identity=52.2427440633245, Blast_Score=412, Evalue=1e-115, Organism=Caenorhabditis elegans, GI71997431, Length=381, Percent_Identity=51.9685039370079, Blast_Score=407, Evalue=1e-114, Organism=Caenorhabditis elegans, GI17565904, Length=346, Percent_Identity=54.0462427745665, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17562584, Length=374, Percent_Identity=25.9358288770053, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17562582, Length=384, Percent_Identity=25.5208333333333, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562876, Length=361, Percent_Identity=22.9916897506925, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71988145, Length=377, Percent_Identity=24.1379310344828, Blast_Score=68, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320033, Length=373, Percent_Identity=53.6193029490617, Blast_Score=416, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6319621, Length=373, Percent_Identity=28.4182305630027, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323099, Length=373, Percent_Identity=26.8096514745308, Blast_Score=90, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6322619, Length=359, Percent_Identity=27.2980501392758, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6319955, Length=359, Percent_Identity=27.2980501392758, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323729, Length=359, Percent_Identity=25.0696378830084, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323961, Length=371, Percent_Identity=25.0673854447439, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6324486, Length=361, Percent_Identity=24.6537396121884, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6319257, Length=357, Percent_Identity=24.6498599439776, Blast_Score=73, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6319258, Length=271, Percent_Identity=26.1992619926199, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI17737895, Length=374, Percent_Identity=57.4866310160428, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI17137530, Length=344, Percent_Identity=27.3255813953488, Blast_Score=83, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014183 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1; =1.1.1.284 [H]
Molecular weight: Translated: 39946; Mature: 39946
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVRAAVALAAGKPLEVTTVELDGPRDGEVMVEIKAAGVCHTDEFTLSGADPEGLFPAIL CCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEECCEEECCCEEECCCCCCCCCHHHH GHEGAGVVVDVGKGVTSVKKGDHVIPLYTPECRQCPSCLSRKTNLCTAIRATQGQGLMPD CCCCCEEEEECCCCCCHHCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GTSRFSFDGKPLHHYMGTSTFANYTVLPEIAVAKIREDAPFDKVCYIGCGVTTGIGAVIN CCCEECCCCCCHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHEE TAKVEPGAKAIVFGLGGIGLNVLQGLRLAGADMIIGVDINDDRKAWGERFGMTHFVNPTD EEECCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCEEECCHHH VGKELVPYLVDMTKSGADQIGGADYTFDCTGNVKVMRQALESCHRGWGQSIVIGVAPAGA HHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC EIATRPFQLVTGRVWKGTAFGGARGRTDVPKIVDWYMQGKIQIDPMITHVMPLDDINRAF CHHCCCEEHHCCCEEECCCCCCCCCCCCCHHHHHHHHCCEEEECCCEEEECCHHHHHHHH DLMRKGESIRGVVTF HHHHCCCCCEEEEEC >Mature Secondary Structure MHVRAAVALAAGKPLEVTTVELDGPRDGEVMVEIKAAGVCHTDEFTLSGADPEGLFPAIL CCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEECCEEECCCEEECCCCCCCCCHHHH GHEGAGVVVDVGKGVTSVKKGDHVIPLYTPECRQCPSCLSRKTNLCTAIRATQGQGLMPD CCCCCEEEEECCCCCCHHCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GTSRFSFDGKPLHHYMGTSTFANYTVLPEIAVAKIREDAPFDKVCYIGCGVTTGIGAVIN CCCEECCCCCCHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHEE TAKVEPGAKAIVFGLGGIGLNVLQGLRLAGADMIIGVDINDDRKAWGERFGMTHFVNPTD EEECCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCEEECCHHH VGKELVPYLVDMTKSGADQIGGADYTFDCTGNVKVMRQALESCHRGWGQSIVIGVAPAGA HHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC EIATRPFQLVTGRVWKGTAFGGARGRTDVPKIVDWYMQGKIQIDPMITHVMPLDDINRAF CHHCCCEEHHCCCEEECCCCCCCCCCCCCHHHHHHHHCCEEEECCCEEEECCHHHHHHHH DLMRKGESIRGVVTF HHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8631716 [H]