Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is yghU [H]

Identifier: 75675768

GI number: 75675768

Start: 1723767

End: 1724639

Strand: Direct

Name: yghU [H]

Synonym: Nwi_1576

Alternate gene names: 75675768

Gene position: 1723767-1724639 (Clockwise)

Preceding gene: 75675766

Following gene: 75675769

Centisome position: 50.67

GC content: 62.77

Gene sequence:

>873_bases
ATGACCGACGCCCCCTATATGCCGCCAAAAGTCTGGACTTTCGATAAAGAGAATGGGGGCAGATTCGCTTCGGTCAACCG
GCCGACCGCCGGCGCGACCCACGAAAAGGTGCTGCCCGTCGGCAAGCATCCCTTCCAGCTTTATTCGCGGGGAACGCCGA
ACGGCCAGAAGGTCACGATCATGTTCGAGGAACTGCTCGCACGCGGTCACGCCGGCGCGGAATATGACGCGTGGCTGATC
CAGATCGACGGCGAGCAGTTCGGCTCGGGGTTTGTCGAGGTCAATCCGAATTCGAAGATTCCGGCGCTGGTTGACCGTTC
GAGACCCGTGCCGTTCCGCGTCTTCGAGTCCGGTGCGATTCTCCTGCATCTTGCGGACAAGTTCCGCGAGTTCATCCCCA
GGGCGACGGCGGCGCGCGCGGAATGCCTGTCCTGGTTGTTCTGGCAGATGGGCAGCGCGCCCTATCTTGGCGGCGGCTTC
GGGCATTTCTACCACTATGCGCCGGAGAAGATCGAATATGCCATCAATCGCTTCGCGATGGAAACGAAGCGGCAGATGGA
TGTGCTCGACCGCCGGCTCAAGGACAACGAGTATCTTGCCGGCAACGAGTACACGATCGCGGACATGGCGGTGTGGCCAT
GGTACGGCGGCTTGGCCGAGGGCAGGCTCTACGGCGACAGCGCAACCTTCCTCGACGTCCAGAGCTACAAGAACGTGCAG
CGCTGGACGGCGCAGATTGCCGCACGGCCCGCGGTGAAGCGCGGCCGCATCGTCAACCGCACCTCCGGTGATCCCGCAAG
CCAGCTTCACGAGCGCCACGACGCCTCGGATTTCGAGACCCGGACGCAGGACAAGCTGGCGAAGCAGGGTTGA

Upstream 100 bases:

>100_bases
TTTTCTTTCCGCGAACCGGTATCCACTTCGCTCGAAAACGCTATAGCCGCGGTATCCTGCCTGTCTCACTATCATGCTCG
CTGTTCCGGAGTGCCTCTTG

Downstream 100 bases:

>100_bases
GACCCGCCCTCTTTCATTAGCAGCCGTTCCGGGCTGGAGGCTCATGCAATGCAAGGAAAGGTCATCGCCGTCACCGGAGC
TTCCGGCGCGCTGGGCAAGG

Product: putative glutathione S-transferase YghU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTIMFEELLARGHAGAEYDAWLI
QIDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAILLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGF
GHFYHYAPEKIEYAINRFAMETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQ
RWTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG

Sequences:

>Translated_290_residues
MTDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTIMFEELLARGHAGAEYDAWLI
QIDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAILLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGF
GHFYHYAPEKIEYAINRFAMETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQ
RWTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG
>Mature_289_residues
TDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTIMFEELLARGHAGAEYDAWLIQ
IDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAILLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGFG
HFYHYAPEKIEYAINRFAMETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQR
WTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=286, Percent_Identity=68.5314685314685, Blast_Score=411, Evalue=1e-116,
Organism=Escherichia coli, GI1788640, Length=215, Percent_Identity=41.8604651162791, Blast_Score=156, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6324100, Length=252, Percent_Identity=28.968253968254, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28571670, Length=175, Percent_Identity=26.2857142857143, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 32750; Mature: 32619

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTI
CCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEE
MFEELLARGHAGAEYDAWLIQIDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAI
EHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCEE
LLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGFGHFYHYAPEKIEYAINRFAM
EEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHH
ETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQ
HHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCCCEEECCCCEEEEHHHHHHHH
RWTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG
HHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTI
CCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEE
MFEELLARGHAGAEYDAWLIQIDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAI
EHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCEE
LLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGFGHFYHYAPEKIEYAINRFAM
EEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHH
ETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQ
HHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCCCEEECCCCEEEEHHHHHHHH
RWTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG
HHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]