| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is yghU [H]
Identifier: 75675768
GI number: 75675768
Start: 1723767
End: 1724639
Strand: Direct
Name: yghU [H]
Synonym: Nwi_1576
Alternate gene names: 75675768
Gene position: 1723767-1724639 (Clockwise)
Preceding gene: 75675766
Following gene: 75675769
Centisome position: 50.67
GC content: 62.77
Gene sequence:
>873_bases ATGACCGACGCCCCCTATATGCCGCCAAAAGTCTGGACTTTCGATAAAGAGAATGGGGGCAGATTCGCTTCGGTCAACCG GCCGACCGCCGGCGCGACCCACGAAAAGGTGCTGCCCGTCGGCAAGCATCCCTTCCAGCTTTATTCGCGGGGAACGCCGA ACGGCCAGAAGGTCACGATCATGTTCGAGGAACTGCTCGCACGCGGTCACGCCGGCGCGGAATATGACGCGTGGCTGATC CAGATCGACGGCGAGCAGTTCGGCTCGGGGTTTGTCGAGGTCAATCCGAATTCGAAGATTCCGGCGCTGGTTGACCGTTC GAGACCCGTGCCGTTCCGCGTCTTCGAGTCCGGTGCGATTCTCCTGCATCTTGCGGACAAGTTCCGCGAGTTCATCCCCA GGGCGACGGCGGCGCGCGCGGAATGCCTGTCCTGGTTGTTCTGGCAGATGGGCAGCGCGCCCTATCTTGGCGGCGGCTTC GGGCATTTCTACCACTATGCGCCGGAGAAGATCGAATATGCCATCAATCGCTTCGCGATGGAAACGAAGCGGCAGATGGA TGTGCTCGACCGCCGGCTCAAGGACAACGAGTATCTTGCCGGCAACGAGTACACGATCGCGGACATGGCGGTGTGGCCAT GGTACGGCGGCTTGGCCGAGGGCAGGCTCTACGGCGACAGCGCAACCTTCCTCGACGTCCAGAGCTACAAGAACGTGCAG CGCTGGACGGCGCAGATTGCCGCACGGCCCGCGGTGAAGCGCGGCCGCATCGTCAACCGCACCTCCGGTGATCCCGCAAG CCAGCTTCACGAGCGCCACGACGCCTCGGATTTCGAGACCCGGACGCAGGACAAGCTGGCGAAGCAGGGTTGA
Upstream 100 bases:
>100_bases TTTTCTTTCCGCGAACCGGTATCCACTTCGCTCGAAAACGCTATAGCCGCGGTATCCTGCCTGTCTCACTATCATGCTCG CTGTTCCGGAGTGCCTCTTG
Downstream 100 bases:
>100_bases GACCCGCCCTCTTTCATTAGCAGCCGTTCCGGGCTGGAGGCTCATGCAATGCAAGGAAAGGTCATCGCCGTCACCGGAGC TTCCGGCGCGCTGGGCAAGG
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTIMFEELLARGHAGAEYDAWLI QIDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAILLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGF GHFYHYAPEKIEYAINRFAMETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQ RWTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG
Sequences:
>Translated_290_residues MTDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTIMFEELLARGHAGAEYDAWLI QIDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAILLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGF GHFYHYAPEKIEYAINRFAMETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQ RWTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG >Mature_289_residues TDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTIMFEELLARGHAGAEYDAWLIQ IDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAILLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGFG HFYHYAPEKIEYAINRFAMETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQR WTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=286, Percent_Identity=68.5314685314685, Blast_Score=411, Evalue=1e-116, Organism=Escherichia coli, GI1788640, Length=215, Percent_Identity=41.8604651162791, Blast_Score=156, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6324100, Length=252, Percent_Identity=28.968253968254, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571670, Length=175, Percent_Identity=26.2857142857143, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32750; Mature: 32619
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTI CCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEE MFEELLARGHAGAEYDAWLIQIDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAI EHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCEE LLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGFGHFYHYAPEKIEYAINRFAM EEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHH ETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQ HHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCCCEEECCCCEEEEHHHHHHHH RWTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG HHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TDAPYMPPKVWTFDKENGGRFASVNRPTAGATHEKVLPVGKHPFQLYSRGTPNGQKVTI CCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEE MFEELLARGHAGAEYDAWLIQIDGEQFGSGFVEVNPNSKIPALVDRSRPVPFRVFESGAI EHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCEE LLHLADKFREFIPRATAARAECLSWLFWQMGSAPYLGGGFGHFYHYAPEKIEYAINRFAM EEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHH ETKRQMDVLDRRLKDNEYLAGNEYTIADMAVWPWYGGLAEGRLYGDSATFLDVQSYKNVQ HHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCCCEEECCCCEEEEHHHHHHHH RWTAQIAARPAVKRGRIVNRTSGDPASQLHERHDASDFETRTQDKLAKQG HHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]