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The map label for this gene is bepC [H]

Identifier: 75675626

GI number: 75675626

Start: 1560268

End: 1561740

Strand: Direct

Name: bepC [H]

Synonym: Nwi_1434

Alternate gene names: 75675626

Gene position: 1560268-1561740 (Clockwise)

Preceding gene: 75675624

Following gene: 75675627

Centisome position: 45.86

GC content: 62.12

Gene sequence:

>1473_bases
ATGATCCGGCGTAGAGGCTCGGCCTTGTTTACGTCTTGTGATATGAAGAATGGAATTCTGCGGATGGGTGGTGTGAGACT
GGCGGCGGCGGCCGCCGTGTTGGCTTTTATGACTGCGTGGCCGGGGACGGCGACACGGGTCTCCGCCGACACCATCGAAT
CTGCATTGGTGCGTGCCTACCAGAGCAACCCTCAGCTCAATGCCCAGCGCGCCGCTGTTCGTGCGACCGACGAGAGCGTG
CCCCAGGCCCTTTCGGGCTATCGGCCCAGAGTCGCCGTAACCACGAGCGGCGGCTTTCAGCATACCGACATGACATTTAG
CCAGGGTCTGCCGGGTCAGGGAAACGTCCTAGGGAGGATCAAGGGTAATCAGACACCGGTAGCTATCGGCGCCACGGTTT
CACAGACGCTGTTCGACGGATTCCAGGCCGCCAACAGGACCCGTGCGGCGGAAGGACAGGTTTCGGCGGCGCGCGAGGGG
CTAAGGGTCCTCGAGCAGACCGTACTGCTCGCTGCTGCGACCATCTATATGGATTATCTGCGGGATGCCGCCATTGTGGA
GGTTCAGCGCAGCAATGTTCGCGTCCTCGAGGAGACGCTCAAGCAGACGCGTGATCGTTTCAATGTCGGCGAGGTGACCC
GCACCGACGTGGCGCAGTCCGAGGCCCAACTCGCCGCCGGACGCACCCAGCTTATGGCCACTGAATCCACCCTCATAACC
ACGCGCGCGAATTATCGGCGCATTGTCGGCAACGAACCGGGGCAGTTGGCGCCGGGCTCGCCCGTTGATCGCTTTCTGCC
GTCAACGCTCGCGCGTTCCGTGGATCTCGCCCTTACCCAAAATCCCAATGTGACCGCGGCGATGTATGGCATCGACGTCA
GCCATTTGCAGGTCAAGGTTGCGGAGGGCGTGCTGTTTCCGACCGTGACCCTTCAGGCCAACGTGCAGAAGGGGTACGAT
CAGCAGCTCACATTGCCGACTCAGTTCGCCGCATCGGCGATCGCGCAGGTGTCGGTGCCGATCTATCAGGGCGGCGCTGA
ATATTCGCTGATCCGCCAGTCCAAGGAAACGCTGGCGCAACAACGTCTCAACCTCGAGCAGGTTCGCAATCAGGCGCGCG
CCAGCACTGTGCAGGCGTGGGGCCAGCTCGAAGCAACCAAGGTGCAGGTGAAGTCGGCGCAGGCGCAGGTCGAGGCTTCG
GAGATCGCGGTCAACGGCATTCGCGAGGAAGCCAAGGCCGGTCAACGAACCACGTTCGACGTGCTGGTCGCGCAACAAGC
CCTCGTCAGCGCCCGAGTGGCCCTGGTGACGGCTCAACACGATCGCGTGGTCGCCTCCTATGCGGTTTTGAATGCCGTTG
GCCGGTTGACGCCGCAGGTACTTAAGCTGAACACCACGGTGTACGATCCCAGTGTCCACTATCATCAGGTTCGCGACAGC
TGGATTGGCCTGCGTACGCCGGATGGACAGTAG

Upstream 100 bases:

>100_bases
TTAGCGCCCCGGCGGCGAATATGTTCGCGTGGGGCAAGTGACTTGGTGGGGAAAGTGACTCGGTGGGGAAAGTGACTCGG
TTGGGCAAGTGGCTCGGGGG

Downstream 100 bases:

>100_bases
TTGCGCCGACGGCGGCGGGTCCTTTGCTTGCAATCAATTGATGCCATGACATACCTTTGCACGAGGTCGTGAAGCGATTC
GGACGTCGTCGGATGCCGGT

Product: type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MIRRRGSALFTSCDMKNGILRMGGVRLAAAAAVLAFMTAWPGTATRVSADTIESALVRAYQSNPQLNAQRAAVRATDESV
PQALSGYRPRVAVTTSGGFQHTDMTFSQGLPGQGNVLGRIKGNQTPVAIGATVSQTLFDGFQAANRTRAAEGQVSAAREG
LRVLEQTVLLAAATIYMDYLRDAAIVEVQRSNVRVLEETLKQTRDRFNVGEVTRTDVAQSEAQLAAGRTQLMATESTLIT
TRANYRRIVGNEPGQLAPGSPVDRFLPSTLARSVDLALTQNPNVTAAMYGIDVSHLQVKVAEGVLFPTVTLQANVQKGYD
QQLTLPTQFAASAIAQVSVPIYQGGAEYSLIRQSKETLAQQRLNLEQVRNQARASTVQAWGQLEATKVQVKSAQAQVEAS
EIAVNGIREEAKAGQRTTFDVLVAQQALVSARVALVTAQHDRVVASYAVLNAVGRLTPQVLKLNTTVYDPSVHYHQVRDS
WIGLRTPDGQ

Sequences:

>Translated_490_residues
MIRRRGSALFTSCDMKNGILRMGGVRLAAAAAVLAFMTAWPGTATRVSADTIESALVRAYQSNPQLNAQRAAVRATDESV
PQALSGYRPRVAVTTSGGFQHTDMTFSQGLPGQGNVLGRIKGNQTPVAIGATVSQTLFDGFQAANRTRAAEGQVSAAREG
LRVLEQTVLLAAATIYMDYLRDAAIVEVQRSNVRVLEETLKQTRDRFNVGEVTRTDVAQSEAQLAAGRTQLMATESTLIT
TRANYRRIVGNEPGQLAPGSPVDRFLPSTLARSVDLALTQNPNVTAAMYGIDVSHLQVKVAEGVLFPTVTLQANVQKGYD
QQLTLPTQFAASAIAQVSVPIYQGGAEYSLIRQSKETLAQQRLNLEQVRNQARASTVQAWGQLEATKVQVKSAQAQVEAS
EIAVNGIREEAKAGQRTTFDVLVAQQALVSARVALVTAQHDRVVASYAVLNAVGRLTPQVLKLNTTVYDPSVHYHQVRDS
WIGLRTPDGQ
>Mature_490_residues
MIRRRGSALFTSCDMKNGILRMGGVRLAAAAAVLAFMTAWPGTATRVSADTIESALVRAYQSNPQLNAQRAAVRATDESV
PQALSGYRPRVAVTTSGGFQHTDMTFSQGLPGQGNVLGRIKGNQTPVAIGATVSQTLFDGFQAANRTRAAEGQVSAAREG
LRVLEQTVLLAAATIYMDYLRDAAIVEVQRSNVRVLEETLKQTRDRFNVGEVTRTDVAQSEAQLAAGRTQLMATESTLIT
TRANYRRIVGNEPGQLAPGSPVDRFLPSTLARSVDLALTQNPNVTAAMYGIDVSHLQVKVAEGVLFPTVTLQANVQKGYD
QQLTLPTQFAASAIAQVSVPIYQGGAEYSLIRQSKETLAQQRLNLEQVRNQARASTVQAWGQLEATKVQVKSAQAQVEAS
EIAVNGIREEAKAGQRTTFDVLVAQQALVSARVALVTAQHDRVVASYAVLNAVGRLTPQVLKLNTTVYDPSVHYHQVRDS
WIGLRTPDGQ

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=440, Percent_Identity=24.5454545454545, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52810; Mature: 52810

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRRGSALFTSCDMKNGILRMGGVRLAAAAAVLAFMTAWPGTATRVSADTIESALVRAY
CCCCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
QSNPQLNAQRAAVRATDESVPQALSGYRPRVAVTTSGGFQHTDMTFSQGLPGQGNVLGRI
HCCCCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCEECCCHHHCCCCCCCCEEEEE
KGNQTPVAIGATVSQTLFDGFQAANRTRAAEGQVSAAREGLRVLEQTVLLAAATIYMDYL
CCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDAAIVEVQRSNVRVLEETLKQTRDRFNVGEVTRTDVAQSEAQLAAGRTQLMATESTLIT
CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHEEEECCEEEE
TRANYRRIVGNEPGQLAPGSPVDRFLPSTLARSVDLALTQNPNVTAAMYGIDVSHLQVKV
ECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEEEEEECCHHHEEEEE
AEGVLFPTVTLQANVQKGYDQQLTLPTQFAASAIAQVSVPIYQGGAEYSLIRQSKETLAQ
ECCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHEECEEECCCCCHHHHHHHHHHHHH
QRLNLEQVRNQARASTVQAWGQLEATKVQVKSAQAQVEASEIAVNGIREEAKAGQRTTFD
HHCCHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VLVAQQALVSARVALVTAQHDRVVASYAVLNAVGRLTPQVLKLNTTVYDPSVHYHQVRDS
HHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHC
WIGLRTPDGQ
CCCCCCCCCC
>Mature Secondary Structure
MIRRRGSALFTSCDMKNGILRMGGVRLAAAAAVLAFMTAWPGTATRVSADTIESALVRAY
CCCCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
QSNPQLNAQRAAVRATDESVPQALSGYRPRVAVTTSGGFQHTDMTFSQGLPGQGNVLGRI
HCCCCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCEECCCHHHCCCCCCCCEEEEE
KGNQTPVAIGATVSQTLFDGFQAANRTRAAEGQVSAAREGLRVLEQTVLLAAATIYMDYL
CCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDAAIVEVQRSNVRVLEETLKQTRDRFNVGEVTRTDVAQSEAQLAAGRTQLMATESTLIT
CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHEEEECCEEEE
TRANYRRIVGNEPGQLAPGSPVDRFLPSTLARSVDLALTQNPNVTAAMYGIDVSHLQVKV
ECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEEEEEECCHHHEEEEE
AEGVLFPTVTLQANVQKGYDQQLTLPTQFAASAIAQVSVPIYQGGAEYSLIRQSKETLAQ
ECCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHEECEEECCCCCHHHHHHHHHHHHH
QRLNLEQVRNQARASTVQAWGQLEATKVQVKSAQAQVEASEIAVNGIREEAKAGQRTTFD
HHCCHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VLVAQQALVSARVALVTAQHDRVVASYAVLNAVGRLTPQVLKLNTTVYDPSVHYHQVRDS
HHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHC
WIGLRTPDGQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]