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The map label for this gene is virR [H]

Identifier: 75675616

GI number: 75675616

Start: 1551093

End: 1551614

Strand: Direct

Name: virR [H]

Synonym: Nwi_1424

Alternate gene names: 75675616

Gene position: 1551093-1551614 (Clockwise)

Preceding gene: 75675615

Following gene: 75675620

Centisome position: 45.59

GC content: 63.98

Gene sequence:

>522_bases
ATGACAGGCCCGGACAAGGAAAAAAGAGGACCGAGGGCGATGGGACAAGAAAACGAAGTCCGGGCGGGAGAGGTCGTGGT
CGAGCCGCCGTCGCCGACGGATGCGGGGCTGGTGTTCGTCGGCCGCGTTCGGACGCCATGGAGAACCCGTGCGGAAGCGC
CGCGTCAAGGGCAGCCTGACGGACCGGTCTGCCGCCTCGAGATATTCGATCCCTGGAAGCCGGCATTGCAGGGCCTGGAG
AGATACGAGAGCATCGAGGTCATTTACTGGCTTCATCTGTCGCGTCGCGACATCGTGCGGCAGGTTCCCAAAAGCAGCGG
CTCGTCCCATGGCACGTTTGCGCTCCGGTCGCCGGTGCGGCCTAATCCGATCGGGACGTCGATCGTGAAGCTGGTGGGTA
TCGAGGGCTCCACGGTTCTGGTGCGTGGACTGGATTGCCTCGACGAGACGCCGCTGCTCGACATCAAGCCGATCCGCTGC
CAATTTGCGTCAGCGCCGAAGGGCGATGGCGAAACCGGCTGA

Upstream 100 bases:

>100_bases
TCCGGCGCGCTGGCGGCGCCTGCCTCGTGCTGCGAAACCCGCGCGTGAAAGGGTAGGATCAGGGGCGTGCGGCCGTGCAG
GCTGTTCTGATCGAGGCGGG

Downstream 100 bases:

>100_bases
ACGCGTCCGCAGCATCAGGCGACGCCGTCTCCGGTCTTGCGAAAAGGGCCGGCTTCCGTGAGTTCCCGGGCCGCTTCGGC
GACGTAGTGACGTTCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTGPDKEKRGPRAMGQENEVRAGEVVVEPPSPTDAGLVFVGRVRTPWRTRAEAPRQGQPDGPVCRLEIFDPWKPALQGLE
RYESIEVIYWLHLSRRDIVRQVPKSSGSSHGTFALRSPVRPNPIGTSIVKLVGIEGSTVLVRGLDCLDETPLLDIKPIRC
QFASAPKGDGETG

Sequences:

>Translated_173_residues
MTGPDKEKRGPRAMGQENEVRAGEVVVEPPSPTDAGLVFVGRVRTPWRTRAEAPRQGQPDGPVCRLEIFDPWKPALQGLE
RYESIEVIYWLHLSRRDIVRQVPKSSGSSHGTFALRSPVRPNPIGTSIVKLVGIEGSTVLVRGLDCLDETPLLDIKPIRC
QFASAPKGDGETG
>Mature_172_residues
TGPDKEKRGPRAMGQENEVRAGEVVVEPPSPTDAGLVFVGRVRTPWRTRAEAPRQGQPDGPVCRLEIFDPWKPALQGLER
YESIEVIYWLHLSRRDIVRQVPKSSGSSHGTFALRSPVRPNPIGTSIVKLVGIEGSTVLVRGLDCLDETPLLDIKPIRCQ
FASAPKGDGETG

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=104, Percent_Identity=36.5384615384615, Blast_Score=71, Evalue=4e-13,
Organism=Escherichia coli, GI1786393, Length=129, Percent_Identity=34.1085271317829, Blast_Score=62, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24586408, Length=125, Percent_Identity=35.2, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45552503, Length=125, Percent_Identity=35.2, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 18960; Mature: 18829

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPDKEKRGPRAMGQENEVRAGEVVVEPPSPTDAGLVFVGRVRTPWRTRAEAPRQGQPD
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
GPVCRLEIFDPWKPALQGLERYESIEVIYWLHLSRRDIVRQVPKSSGSSHGTFALRSPVR
CCEEEEEECCCHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHCCCCCCCCEEEECCCCC
PNPIGTSIVKLVGIEGSTVLVRGLDCLDETPLLDIKPIRCQFASAPKGDGETG
CCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TGPDKEKRGPRAMGQENEVRAGEVVVEPPSPTDAGLVFVGRVRTPWRTRAEAPRQGQPD
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
GPVCRLEIFDPWKPALQGLERYESIEVIYWLHLSRRDIVRQVPKSSGSSHGTFALRSPVR
CCEEEEEECCCHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHCCCCCCCCEEEECCCCC
PNPIGTSIVKLVGIEGSTVLVRGLDCLDETPLLDIKPIRCQFASAPKGDGETG
CCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA