| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is narK2 [H]
Identifier: 75675611
GI number: 75675611
Start: 1545582
End: 1546838
Strand: Direct
Name: narK2 [H]
Synonym: Nwi_1419
Alternate gene names: 75675611
Gene position: 1545582-1546838 (Clockwise)
Preceding gene: 75675610
Following gene: 162139846
Centisome position: 45.43
GC content: 62.61
Gene sequence:
>1257_bases ATGGCGAGATCCGGCAACCTCTCCGTCCTGCTCATCACGACCTGGGCATTCACCGTTTGCTTCGCTGTGTGGATGATGTT CGGTGTGATCGGCATTCCGATCCGCGAACAGCTTGGGCTCGGTTCGACGGAATTCGGTCTGCTCACGGCGACGCCTGTCC TTACCGGCGCATTGTTTCGCTTGCCGCTGGGCATCTGGACCGACCGCTTCGGCGGACGGATCATCATGCTGCTGCTGCTG GTCGGCTGCGCGGTCCCGGTGTGGCTGTCCGCCTATGCGACCACGCTCTGGCAGTTCCTGCTGCTAGGACTGGCGCTGGG TCTGGTCGGCGCGTCCTTTTCGGTCGGCACGCCCTATGTCGCGCGCTTCTTTCCCAGGGAACGCCGGGGCTTCGCGATGG GTTTCTTCGGCGCCGGCACGATCGGCGCCGCCCTGAACATGTTCGTATCTCCCTGGCTCATAGAGGCCTATGGCTGGCAG ATGGTGCCCAAGGTATATGCCGTCGTGCTGCTGGTCACCGCGCTTCTCTTTTGGGCGTTGTCCGCGCGTGATCCCGGCGT CGGCAGTCAGGCGCCTTCGATGTGGCGACAATTGTCGGTGCTGCGCGATCCTCGCGTCTGGAAGTATTGCCAGTACTATT CGATCGTGTTCGGCGGTTTCACCGCGCTGTCGATCTGGATGCCGCAATACTTCAAGACCGAGTACGGTTTCACCATCGCG CAGGCGTCGCTGCTGGCGGCGTGCTTCTCGCTTCCCGGCGGGGCCTTTCGCGCCTTGGGCGGCTGGCTTTCGGATCGCTT CGGCGCCCATAACGTCACCTGGTGGGTGCTGTGGGTTGCCTGGGTCTGCCTGTTTCTGCTGTCCTATCCCAGGACGGACC TGATCGTGCACACGGTCCGTGATCCGCTGAGTTTCAGCATCGCCCTGCCGTCGTGGTTCTTCACCATGCTTCTCTTCACG CTCGGCATCGCCTTTGCCTGCGGCATGGCCTCGACGTTCAAATACATCGGCGACGACTTTCCCGACAGCATGGGAGCGGT ATCCGGCGTCGTCGGCATGGCGGGCGGCTTCGGCGGCTTCCTGCTGCCGATCACGTTCGGGGTGATCCTTGACTGGCTCG GCTTCAACTCGAGCTGCTTCATGCTGCTCTACGGCATCATCTGGGTATCGCTGACGCTCAACTACCTCACCGAAGTCAGG CAGGCGCCGGTCATGGGAGAGCAAGTTCGATCGCCTGCGGCGGAGCAGTCACGTTAG
Upstream 100 bases:
>100_bases CCCGAGCCTGCTTATGATGTGACACGGTCGTGAGCCGGGCGGGAAAGGCAGGAACAGCCGAACCCCCGGTTGATCGCGAG TCAGCATCGGGGCGAACAAT
Downstream 100 bases:
>100_bases GGTGTTTTCGAGCGACGTGGAAACCGCTTCGCGTGAAGAAAACGCGTCAAAACAATAATCTCTATAGCGTTTTCGAGCGA AGTGGGTACCGGTTCGCGTG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MARSGNLSVLLITTWAFTVCFAVWMMFGVIGIPIREQLGLGSTEFGLLTATPVLTGALFRLPLGIWTDRFGGRIIMLLLL VGCAVPVWLSAYATTLWQFLLLGLALGLVGASFSVGTPYVARFFPRERRGFAMGFFGAGTIGAALNMFVSPWLIEAYGWQ MVPKVYAVVLLVTALLFWALSARDPGVGSQAPSMWRQLSVLRDPRVWKYCQYYSIVFGGFTALSIWMPQYFKTEYGFTIA QASLLAACFSLPGGAFRALGGWLSDRFGAHNVTWWVLWVAWVCLFLLSYPRTDLIVHTVRDPLSFSIALPSWFFTMLLFT LGIAFACGMASTFKYIGDDFPDSMGAVSGVVGMAGGFGGFLLPITFGVILDWLGFNSSCFMLLYGIIWVSLTLNYLTEVR QAPVMGEQVRSPAAEQSR
Sequences:
>Translated_418_residues MARSGNLSVLLITTWAFTVCFAVWMMFGVIGIPIREQLGLGSTEFGLLTATPVLTGALFRLPLGIWTDRFGGRIIMLLLL VGCAVPVWLSAYATTLWQFLLLGLALGLVGASFSVGTPYVARFFPRERRGFAMGFFGAGTIGAALNMFVSPWLIEAYGWQ MVPKVYAVVLLVTALLFWALSARDPGVGSQAPSMWRQLSVLRDPRVWKYCQYYSIVFGGFTALSIWMPQYFKTEYGFTIA QASLLAACFSLPGGAFRALGGWLSDRFGAHNVTWWVLWVAWVCLFLLSYPRTDLIVHTVRDPLSFSIALPSWFFTMLLFT LGIAFACGMASTFKYIGDDFPDSMGAVSGVVGMAGGFGGFLLPITFGVILDWLGFNSSCFMLLYGIIWVSLTLNYLTEVR QAPVMGEQVRSPAAEQSR >Mature_417_residues ARSGNLSVLLITTWAFTVCFAVWMMFGVIGIPIREQLGLGSTEFGLLTATPVLTGALFRLPLGIWTDRFGGRIIMLLLLV GCAVPVWLSAYATTLWQFLLLGLALGLVGASFSVGTPYVARFFPRERRGFAMGFFGAGTIGAALNMFVSPWLIEAYGWQM VPKVYAVVLLVTALLFWALSARDPGVGSQAPSMWRQLSVLRDPRVWKYCQYYSIVFGGFTALSIWMPQYFKTEYGFTIAQ ASLLAACFSLPGGAFRALGGWLSDRFGAHNVTWWVLWVAWVCLFLLSYPRTDLIVHTVRDPLSFSIALPSWFFTMLLFTL GIAFACGMASTFKYIGDDFPDSMGAVSGVVGMAGGFGGFLLPITFGVILDWLGFNSSCFMLLYGIIWVSLTLNYLTEVRQ APVMGEQVRSPAAEQSR
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI2367379, Length=264, Percent_Identity=28.7878787878788, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46024; Mature: 45893
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSGNLSVLLITTWAFTVCFAVWMMFGVIGIPIREQLGLGSTEFGLLTATPVLTGALFR CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH LPLGIWTDRFGGRIIMLLLLVGCAVPVWLSAYATTLWQFLLLGLALGLVGASFSVGTPYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ARFFPRERRGFAMGFFGAGTIGAALNMFVSPWLIEAYGWQMVPKVYAVVLLVTALLFWAL HHHCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH SARDPGVGSQAPSMWRQLSVLRDPRVWKYCQYYSIVFGGFTALSIWMPQYFKTEYGFTIA CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QASLLAACFSLPGGAFRALGGWLSDRFGAHNVTWWVLWVAWVCLFLLSYPRTDLIVHTVR HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHC DPLSFSIALPSWFFTMLLFTLGIAFACGMASTFKYIGDDFPDSMGAVSGVVGMAGGFGGF CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH LLPITFGVILDWLGFNSSCFMLLYGIIWVSLTLNYLTEVRQAPVMGEQVRSPAAEQSR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC >Mature Secondary Structure ARSGNLSVLLITTWAFTVCFAVWMMFGVIGIPIREQLGLGSTEFGLLTATPVLTGALFR CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH LPLGIWTDRFGGRIIMLLLLVGCAVPVWLSAYATTLWQFLLLGLALGLVGASFSVGTPYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ARFFPRERRGFAMGFFGAGTIGAALNMFVSPWLIEAYGWQMVPKVYAVVLLVTALLFWAL HHHCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH SARDPGVGSQAPSMWRQLSVLRDPRVWKYCQYYSIVFGGFTALSIWMPQYFKTEYGFTIA CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QASLLAACFSLPGGAFRALGGWLSDRFGAHNVTWWVLWVAWVCLFLLSYPRTDLIVHTVR HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHC DPLSFSIALPSWFFTMLLFTLGIAFACGMASTFKYIGDDFPDSMGAVSGVVGMAGGFGGF CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH LLPITFGVILDWLGFNSSCFMLLYGIIWVSLTLNYLTEVRQAPVMGEQVRSPAAEQSR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]