| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is fusA [H]
Identifier: 75675553
GI number: 75675553
Start: 1496290
End: 1498362
Strand: Direct
Name: fusA [H]
Synonym: Nwi_1361
Alternate gene names: 75675553
Gene position: 1496290-1498362 (Clockwise)
Preceding gene: 75675552
Following gene: 75675554
Centisome position: 43.98
GC content: 60.78
Gene sequence:
>2073_bases ATGCCCCGCCAACATGCCATCGAGGATTACCGTAACTTCGGTATCATGGCGCATATCGACGCCGGCAAGACGACGACGAC CGAGCGTATCCTTTATTACACCGGCAAGAGCCACAAGATCGGCGAAGTGCACGAAGGTGCGGCGACGATGGACTGGATGA CGCAGGAGCAGGAGCGCGGCATCACCATCACCTCGGCTGCGACCACCGCGTTCTGGGACGGCAAGCGGCTGAACATCATC GACACTCCGGGTCACGTCGACTTCACCATCGAGGTGGAGCGCTCCTTGCGTGTGCTCGACGGCGCCGTATGCGTGCTCGA TTCCAACCAGGGAGTCGAGCCGCAGACCGAAACGGTCTGGCGTCAGGGCGACAAGTACAAGGTGCCGCGCATCGTCTTCT GCAACAAGATGGATAAGACCGGCGCCGACTTCTACAAGTGTCTCGCTGACATCGTCGATCGTCTCGGTGCGCGCCCTGTT GCGCTGCAGTTGCCGATTGGCTCGGAAAGCAACTTTAAGGGCATGGTCGACCTCGTCCGCATGAAGGCGCTGGTCTGGAA CAACGAAGCGCTGGGCGCGATGTACGACATCGTAGACATCCCGGCTGACCTTGCCGACAAGGCAAAGGAGTATCGCGAGA AGCTGGTGGAGGCCGCCGTCGAACTCGATGACGACGCCATGGCCGCTTATCTCGACGGCGCCGAGCCCGACGAAGCCACG CTGAAGAAGCTGATCCGCAAGGCGGTGCTGACCGGCGCTTTCTATCCGGTGCTGTGCGGCACGGCATTCAAGAACAAGGG CGTCCAGCCGCTGCTCGATGCCGTGGTCGCCTATCTGCCGTCGCCGCTCGACGTTCCGGCTATCAAGGGCGTTGACGACA AAGGCAACGAAGTTGTCCGTCACGCCGACGACAAGGAGCCGATGTCGCTGCTGGCGTTCAAGATCATGGACGACCCATTC GTCGGGACGATCACGTTCTGCCGCATCTATTCGGGCATTCTTCAGAGCGGCACCGGCGTCGTCAATTCGACGCGCGAAAA GAAAGAGCGCATCGGCCGGATGTTGCTGATGCATGCGAACAATCGTGAAGACATCAAGGAGGCCTATGCCGGCGACATCG TTGCGCTGGCCGGCCTGAAGGAAGCGCGCACCGGCGACACGCTGTGCGATCCCGCTCATCAGGTGATTCTCGAAAAGATG GAGTTTCCTGATCCGGTCATCGAGATCGCGATCGAGCCGAAGTCCAAGGCGGACCAGGAAAAGCTGGGTATCGCGCTGGC GAAGCTTGCGGCCGAAGATCCATCCTTTCGCGTCTCGACCGACCAGGAGTCCGGCCAGACCATCCTCAAGGGCATGGGCG AGCTCCATCTTGACATCAAGGTCGATATTCTCAAGCGCACCTACAAGGTCGACGCCAATATCGGCGCGCCGCAGGTGGCG TTCCGCGAGCGCGTCACCAAGCGTGTCGAGCACAGCTACACCCACAAGAAGCAGACGGGCGGCACCGGCCAGTTTGCGGC GGTGACGCTGATCGTCGAGCCGAGCGAGCCCGGCAAAGGCTACGAGTTCGAGTCGAAGATCGTCGGCGGTGCCGTGCCGA AGGAATACATCCCCGGCGTGGAGAAGGGCATCGAGAGCGTGCTCAGTTCGGGCGTGGTCGCTGGCTTCCCTGTTGTCGAC GTCAAGGTGCAGCTGATCGACGGCAAGTTCCATGACGTCGACTCATCGGCGCTGGCATTCGAAATCGCGACGCGCGCCTG CTTCCGTGAAGCTCTGCAGAAGGGCAAGTCGGTGCTGCTGGAGCCGATCATGAAAGTCGAAGTGGTGACGCCGGAAGACT ATACCGGATCGGTCATCGGCGATCTCAATTCGCGGCGCGGCCAGATCCAGGGTCAGGACATGCGCGGCAACGCCAACGTC ATCAACGCGATGGTGCCGCTCATGAACATGTTCGGCTACGTGAACAATCTGCGCTCGATGAGTCAGGGGCGCGCGACCTT TACGATGCAATTCGATCATTACGCGGAAGCGCCGGCGAATGTGTCGGCGGAAGTCCAGAAAAAGTTTGCCTGA
Upstream 100 bases:
>100_bases TCAAGAAGCGGGAAGACGTGCACAAGATGGCGGAAGCCAACCGTGCGTTCTCGCACTATCGCTGGTAACGGCGACACAAC AGGAATTTAAGGACAGCTCC
Downstream 100 bases:
>100_bases TTGTCGCTGGCGACAGTCGACGACTGAACGGAGAGTCAAATGGCCAAAGCAAAGTTTGAACGTAACAAGCCGCATTGCAA CATTGGAACGATCGGTCACG
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MPRQHAIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHEGAATMDWMTQEQERGITITSAATTAFWDGKRLNII DTPGHVDFTIEVERSLRVLDGAVCVLDSNQGVEPQTETVWRQGDKYKVPRIVFCNKMDKTGADFYKCLADIVDRLGARPV ALQLPIGSESNFKGMVDLVRMKALVWNNEALGAMYDIVDIPADLADKAKEYREKLVEAAVELDDDAMAAYLDGAEPDEAT LKKLIRKAVLTGAFYPVLCGTAFKNKGVQPLLDAVVAYLPSPLDVPAIKGVDDKGNEVVRHADDKEPMSLLAFKIMDDPF VGTITFCRIYSGILQSGTGVVNSTREKKERIGRMLLMHANNREDIKEAYAGDIVALAGLKEARTGDTLCDPAHQVILEKM EFPDPVIEIAIEPKSKADQEKLGIALAKLAAEDPSFRVSTDQESGQTILKGMGELHLDIKVDILKRTYKVDANIGAPQVA FRERVTKRVEHSYTHKKQTGGTGQFAAVTLIVEPSEPGKGYEFESKIVGGAVPKEYIPGVEKGIESVLSSGVVAGFPVVD VKVQLIDGKFHDVDSSALAFEIATRACFREALQKGKSVLLEPIMKVEVVTPEDYTGSVIGDLNSRRGQIQGQDMRGNANV INAMVPLMNMFGYVNNLRSMSQGRATFTMQFDHYAEAPANVSAEVQKKFA
Sequences:
>Translated_690_residues MPRQHAIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHEGAATMDWMTQEQERGITITSAATTAFWDGKRLNII DTPGHVDFTIEVERSLRVLDGAVCVLDSNQGVEPQTETVWRQGDKYKVPRIVFCNKMDKTGADFYKCLADIVDRLGARPV ALQLPIGSESNFKGMVDLVRMKALVWNNEALGAMYDIVDIPADLADKAKEYREKLVEAAVELDDDAMAAYLDGAEPDEAT LKKLIRKAVLTGAFYPVLCGTAFKNKGVQPLLDAVVAYLPSPLDVPAIKGVDDKGNEVVRHADDKEPMSLLAFKIMDDPF VGTITFCRIYSGILQSGTGVVNSTREKKERIGRMLLMHANNREDIKEAYAGDIVALAGLKEARTGDTLCDPAHQVILEKM EFPDPVIEIAIEPKSKADQEKLGIALAKLAAEDPSFRVSTDQESGQTILKGMGELHLDIKVDILKRTYKVDANIGAPQVA FRERVTKRVEHSYTHKKQTGGTGQFAAVTLIVEPSEPGKGYEFESKIVGGAVPKEYIPGVEKGIESVLSSGVVAGFPVVD VKVQLIDGKFHDVDSSALAFEIATRACFREALQKGKSVLLEPIMKVEVVTPEDYTGSVIGDLNSRRGQIQGQDMRGNANV INAMVPLMNMFGYVNNLRSMSQGRATFTMQFDHYAEAPANVSAEVQKKFA >Mature_689_residues PRQHAIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHEGAATMDWMTQEQERGITITSAATTAFWDGKRLNIID TPGHVDFTIEVERSLRVLDGAVCVLDSNQGVEPQTETVWRQGDKYKVPRIVFCNKMDKTGADFYKCLADIVDRLGARPVA LQLPIGSESNFKGMVDLVRMKALVWNNEALGAMYDIVDIPADLADKAKEYREKLVEAAVELDDDAMAAYLDGAEPDEATL KKLIRKAVLTGAFYPVLCGTAFKNKGVQPLLDAVVAYLPSPLDVPAIKGVDDKGNEVVRHADDKEPMSLLAFKIMDDPFV GTITFCRIYSGILQSGTGVVNSTREKKERIGRMLLMHANNREDIKEAYAGDIVALAGLKEARTGDTLCDPAHQVILEKME FPDPVIEIAIEPKSKADQEKLGIALAKLAAEDPSFRVSTDQESGQTILKGMGELHLDIKVDILKRTYKVDANIGAPQVAF RERVTKRVEHSYTHKKQTGGTGQFAAVTLIVEPSEPGKGYEFESKIVGGAVPKEYIPGVEKGIESVLSSGVVAGFPVVDV KVQLIDGKFHDVDSSALAFEIATRACFREALQKGKSVLLEPIMKVEVVTPEDYTGSVIGDLNSRRGQIQGQDMRGNANVI NAMVPLMNMFGYVNNLRSMSQGRATFTMQFDHYAEAPANVSAEVQKKFA
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=695, Percent_Identity=42.158273381295, Blast_Score=530, Evalue=1e-150, Organism=Homo sapiens, GI19923640, Length=713, Percent_Identity=40.1122019635344, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI25306283, Length=453, Percent_Identity=43.2671081677704, Blast_Score=328, Evalue=9e-90, Organism=Homo sapiens, GI25306287, Length=292, Percent_Identity=52.0547945205479, Blast_Score=278, Evalue=2e-74, Organism=Homo sapiens, GI4503483, Length=494, Percent_Identity=26.3157894736842, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI157426893, Length=141, Percent_Identity=39.0070921985816, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI94966754, Length=167, Percent_Identity=32.9341317365269, Blast_Score=91, Evalue=5e-18, Organism=Homo sapiens, GI217272894, Length=487, Percent_Identity=24.6406570841889, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI217272892, Length=487, Percent_Identity=24.6406570841889, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI310132016, Length=124, Percent_Identity=35.4838709677419, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI310110807, Length=124, Percent_Identity=35.4838709677419, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI310123363, Length=124, Percent_Identity=35.4838709677419, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1789738, Length=698, Percent_Identity=59.1690544412607, Blast_Score=835, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=495, Percent_Identity=27.2727272727273, Blast_Score=151, Evalue=1e-37, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=37.7142857142857, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788922, Length=155, Percent_Identity=39.3548387096774, Blast_Score=99, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17533571, Length=702, Percent_Identity=40.3133903133903, Blast_Score=498, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17556745, Length=726, Percent_Identity=31.129476584022, Blast_Score=332, Evalue=4e-91, Organism=Caenorhabditis elegans, GI17506493, Length=480, Percent_Identity=26.25, Blast_Score=100, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17557151, Length=136, Percent_Identity=43.3823529411765, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71988819, Length=134, Percent_Identity=33.5820895522388, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71988811, Length=134, Percent_Identity=33.5820895522388, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17552882, Length=158, Percent_Identity=31.0126582278481, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323098, Length=689, Percent_Identity=41.3642960812772, Blast_Score=522, Evalue=1e-149, Organism=Saccharomyces cerevisiae, GI6322359, Length=772, Percent_Identity=33.5492227979275, Blast_Score=366, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6323320, Length=158, Percent_Identity=36.0759493670886, Blast_Score=97, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6324707, Length=174, Percent_Identity=36.2068965517241, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320593, Length=174, Percent_Identity=36.2068965517241, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6324166, Length=170, Percent_Identity=31.7647058823529, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582462, Length=697, Percent_Identity=42.467718794835, Blast_Score=549, Evalue=1e-156, Organism=Drosophila melanogaster, GI221458488, Length=705, Percent_Identity=36.3120567375887, Blast_Score=394, Evalue=1e-109, Organism=Drosophila melanogaster, GI24585711, Length=830, Percent_Identity=24.9397590361446, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24585713, Length=830, Percent_Identity=24.9397590361446, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24585709, Length=830, Percent_Identity=24.9397590361446, Blast_Score=171, Evalue=2e-42, Organism=Drosophila melanogaster, GI78706572, Length=157, Percent_Identity=36.3057324840764, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI28574573, Length=146, Percent_Identity=34.2465753424658, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357743, Length=134, Percent_Identity=32.8358208955224, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 75754; Mature: 75622
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRQHAIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHEGAATMDWMTQEQERG CCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCHHCCCHHHHHHHHHHHCC ITITSAATTAFWDGKRLNIIDTPGHVDFTIEVERSLRVLDGAVCVLDSNQGVEPQTETVW EEEEECCEEEEECCCEEEEEECCCCEEEEEEECCHHHEECCEEEEEECCCCCCCCHHHHH RQGDKYKVPRIVFCNKMDKTGADFYKCLADIVDRLGARPVALQLPIGSESNFKGMVDLVR HCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH MKALVWNNEALGAMYDIVDIPADLADKAKEYREKLVEAAVELDDDAMAAYLDGAEPDEAT HHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCHHH LKKLIRKAVLTGAFYPVLCGTAFKNKGVQPLLDAVVAYLPSPLDVPAIKGVDDKGNEVVR HHHHHHHHHHHCCHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH HADDKEPMSLLAFKIMDDPFVGTITFCRIYSGILQSGTGVVNSTREKKERIGRMLLMHAN CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECC NREDIKEAYAGDIVALAGLKEARTGDTLCDPAHQVILEKMEFPDPVIEIAIEPKSKADQE CHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHH KLGIALAKLAAEDPSFRVSTDQESGQTILKGMGELHLDIKVDILKRTYKVDANIGAPQVA HHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCEEEEEEEEEEHHHEEECCCCCCCHHH FRERVTKRVEHSYTHKKQTGGTGQFAAVTLIVEPSEPGKGYEFESKIVGGAVPKEYIPGV HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCHHHCCCH EKGIESVLSSGVVAGFPVVDVKVQLIDGKFHDVDSSALAFEIATRACFREALQKGKSVLL HHHHHHHHHCCCEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHH EPIMKVEVVTPEDYTGSVIGDLNSRRGQIQGQDMRGNANVINAMVPLMNMFGYVNNLRSM CCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SQGRATFTMQFDHYAEAPANVSAEVQKKFA HCCCEEEEEEECCCCCCCCCCCHHHHHHCC >Mature Secondary Structure PRQHAIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHEGAATMDWMTQEQERG CCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCHHCCCHHHHHHHHHHHCC ITITSAATTAFWDGKRLNIIDTPGHVDFTIEVERSLRVLDGAVCVLDSNQGVEPQTETVW EEEEECCEEEEECCCEEEEEECCCCEEEEEEECCHHHEECCEEEEEECCCCCCCCHHHHH RQGDKYKVPRIVFCNKMDKTGADFYKCLADIVDRLGARPVALQLPIGSESNFKGMVDLVR HCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH MKALVWNNEALGAMYDIVDIPADLADKAKEYREKLVEAAVELDDDAMAAYLDGAEPDEAT HHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCHHH LKKLIRKAVLTGAFYPVLCGTAFKNKGVQPLLDAVVAYLPSPLDVPAIKGVDDKGNEVVR HHHHHHHHHHHCCHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH HADDKEPMSLLAFKIMDDPFVGTITFCRIYSGILQSGTGVVNSTREKKERIGRMLLMHAN CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECC NREDIKEAYAGDIVALAGLKEARTGDTLCDPAHQVILEKMEFPDPVIEIAIEPKSKADQE CHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHH KLGIALAKLAAEDPSFRVSTDQESGQTILKGMGELHLDIKVDILKRTYKVDANIGAPQVA HHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCEEEEEEEEEEHHHEEECCCCCCCHHH FRERVTKRVEHSYTHKKQTGGTGQFAAVTLIVEPSEPGKGYEFESKIVGGAVPKEYIPGV HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCHHHCCCH EKGIESVLSSGVVAGFPVVDVKVQLIDGKFHDVDSSALAFEIATRACFREALQKGKSVLL HHHHHHHHHCCCEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHH EPIMKVEVVTPEDYTGSVIGDLNSRRGQIQGQDMRGNANVINAMVPLMNMFGYVNNLRSM CCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SQGRATFTMQFDHYAEAPANVSAEVQKKFA HCCCEEEEEEECCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]