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The map label for this gene is omp31 [H]

Identifier: 75675529

GI number: 75675529

Start: 1466308

End: 1467033

Strand: Direct

Name: omp31 [H]

Synonym: Nwi_1337

Alternate gene names: 75675529

Gene position: 1466308-1467033 (Clockwise)

Preceding gene: 75675528

Following gene: 75675534

Centisome position: 43.1

GC content: 64.33

Gene sequence:

>726_bases
ATGAAAAAGTTTTTGCTCACGGCCGTTGTGGCTACGGCCTTCGCCGCGCCCGCGCTTGCGGCTGACATTGCGCCGCGGCC
CTATACAAAGGCGCCGGTGCCCTATACGCCGCCGCAGGCTGTTTACAACTGGACCGGCTTTTACATCGGTGGCCATCTCG
GCGGCGCGTTCGGCGGCGATCTGGGTGGAAGCGACGGCCGTTTCCTCGGCGGTGTGCAGGGCGGCGCCGACTACCAGTTC
GCGAACAACTGGGTGCTCGGCATCGAGGCCCAGCATAGCTGGCTCGCCAACTACAGAGAGAACGTGGCCTTTCCGGGCGG
CAGCGTTGTGACCGGCGGCAACAGCGGGCTGGGTTCGGTGACCGGCCGGCTCGGCTATAGCTGGGGACCGACCCTTCTCT
ACGCCAAGGGCGGCTATGCGTTCAGGGACGGCGCGCTCGGTGTGACCGACGCGGCCGGCGCGCCGCAGGCTTTCACAACC
ACCGGAAATCGAAATAGCGGTTACACCGTCGGCGCGGGTCTCGAATACATGTTCGCGCCGAACTGGTCCGCCAAGGCGGA
GTACCAGTATTTCAATTTCGGCAGAACGACATTCGGCGCGGGTTCGCCGGCGGATGTTGTCGGAGCGAGCTTCCGCAACG
ACGAGCATACCGTGAAAGCCGGCGTGAACTATCGCTTCGGCTGGGGTGGGCCACCGGCCCCTCAATATCCGGCTCCTCAA
TATTGA

Upstream 100 bases:

>100_bases
CGAGGCCGCCGCTCTGCCGTTCGGCAACCAAACTCGCGCCACGTTGTTTGTCCAGGTTGATTGAAACGATGATGGTATCC
AACGAGAGGGGAAACCCATC

Downstream 100 bases:

>100_bases
GGATCGCCTCGCGCCGAATGGCAAAGGCCGGCATCGCGCCGGCCTTTTGAGCATGATCTTTTCCGAAAACCGGTTTCCAC
TTTGCGCTGGCGCGGCCCTT

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKKFLLTAVVATAFAAPALAADIAPRPYTKAPVPYTPPQAVYNWTGFYIGGHLGGAFGGDLGGSDGRFLGGVQGGADYQF
ANNWVLGIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSVTGRLGYSWGPTLLYAKGGYAFRDGALGVTDAAGAPQAFTT
TGNRNSGYTVGAGLEYMFAPNWSAKAEYQYFNFGRTTFGAGSPADVVGASFRNDEHTVKAGVNYRFGWGGPPAPQYPAPQ
Y

Sequences:

>Translated_241_residues
MKKFLLTAVVATAFAAPALAADIAPRPYTKAPVPYTPPQAVYNWTGFYIGGHLGGAFGGDLGGSDGRFLGGVQGGADYQF
ANNWVLGIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSVTGRLGYSWGPTLLYAKGGYAFRDGALGVTDAAGAPQAFTT
TGNRNSGYTVGAGLEYMFAPNWSAKAEYQYFNFGRTTFGAGSPADVVGASFRNDEHTVKAGVNYRFGWGGPPAPQYPAPQ
Y
>Mature_241_residues
MKKFLLTAVVATAFAAPALAADIAPRPYTKAPVPYTPPQAVYNWTGFYIGGHLGGAFGGDLGGSDGRFLGGVQGGADYQF
ANNWVLGIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSVTGRLGYSWGPTLLYAKGGYAFRDGALGVTDAAGAPQAFTT
TGNRNSGYTVGAGLEYMFAPNWSAKAEYQYFNFGRTTFGAGSPADVVGASFRNDEHTVKAGVNYRFGWGGPPAPQYPAPQ
Y

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 25168; Mature: 25168

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLLTAVVATAFAAPALAADIAPRPYTKAPVPYTPPQAVYNWTGFYIGGHLGGAFGGD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCEEEEECCCCCCCCCC
LGGSDGRFLGGVQGGADYQFANNWVLGIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSV
CCCCCCCEEECCCCCCCEEECCCEEEEEECCHHHHHHHHHCCCCCCCCEEECCCCCCCCH
TGRLGYSWGPTLLYAKGGYAFRDGALGVTDAAGAPQAFTTTGNRNSGYTVGAGLEYMFAP
HHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEECCEEEEECC
NWSAKAEYQYFNFGRTTFGAGSPADVVGASFRNDEHTVKAGVNYRFGWGGPPAPQYPAPQ
CCCCCCEEEEEECCCEECCCCCCHHHHCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCC
Y
C
>Mature Secondary Structure
MKKFLLTAVVATAFAAPALAADIAPRPYTKAPVPYTPPQAVYNWTGFYIGGHLGGAFGGD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCEEEEECCCCCCCCCC
LGGSDGRFLGGVQGGADYQFANNWVLGIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSV
CCCCCCCEEECCCCCCCEEECCCEEEEEECCHHHHHHHHHCCCCCCCCEEECCCCCCCCH
TGRLGYSWGPTLLYAKGGYAFRDGALGVTDAAGAPQAFTTTGNRNSGYTVGAGLEYMFAP
HHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEECCEEEEECC
NWSAKAEYQYFNFGRTTFGAGSPADVVGASFRNDEHTVKAGVNYRFGWGGPPAPQYPAPQ
CCCCCCEEEEEECCCEECCCCCCHHHHCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]