| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675524
Identifier: 75675524
GI number: 75675524
Start: 1461430
End: 1463100
Strand: Direct
Name: 75675524
Synonym: Nwi_1332
Alternate gene names: NA
Gene position: 1461430-1463100 (Clockwise)
Preceding gene: 75675523
Following gene: 75675528
Centisome position: 42.96
GC content: 64.51
Gene sequence:
>1671_bases ATGATCATTCGGCAATTCCTAAGCTGGGTACGGACCGCTTCCGCGGGCGCGCGCGCCGAGGCGACGCGAGCGCTGGCACG CGCGTGGCTCATATCCGATCTCTCTGATGATGAACGCGCCGCCGCCGAGGGTGGGCTGCTGCTGCAACTCGATGACTCGT CTCCGCTGGTTCGCCGGGCGATGGCGGACGTCTTTGCGCGCAGCGCGAACGCGCCGCCAACGATCGTTCGGGCATTGTCG GTCGATCAGCCTTCGGTCGCTATTCCGGTTCTCGAACATTCGCCGCTCCTGACCGATGCGGATCTCGTCGACATCGTCGC GACCGGTAGCTGCGAGGTGCAGTGCGCCGTCGCACGCCGCGTTCGCGTGCCGGTGCCGGTCTGTGCAGCCATCGCCGAGG TTGGCTCGGCGGCGGCGGCCCTTGAGCTTATCGAGAATCCGGGCGCCGATCTCGCTCGCGTTTCATGGGATCGCATCGTC GAACGGCATGGTCATCTCCCGGCGATCCGGGAAGCGATGCTCGCGCTCGACGGTCTGCCCGCGGTCACGCGGCTCTTGCT GGCTGTAAAGCTTTCGGACTCGCTGGCGCGGTTCGTTGTCGCGCGAGACTGGCTCAGCGCCGAGCGCGCCGGCCGTACGG TCAGCGACGCCCGCGATCGCTCGATCGTCGATATCGTGGCGCGTGCGCGAGAGGACGAGATGACGTGTCTGGTCGCGCAT CTGCGCGCCACGGGGCAACTCACCGCCGGATTGATGTTGCGCGCGCTGCTGTCGGGGACTCTCGGCCTGTTTCACCATGC GCTGGCGGATCTGTCCGGGCTGCCTTTCAGTCGCGTCACCGCGCTTGTTCACGATCGCGGCGGCGCGAGCCTGCCTGCTT TGCTGACGCGGGCGGGGCTGCCGGAATCCGCGTTTCCTGCGTTTCGCGCCGCGCTGGAAGCGCATGAAGAGATTGGTTTT GTGGCAACGGTCGATGGCGCGGTGCGGCTGCGTCGTCGCATGGTCGAACACGTGCTGACAGTTTGTGAAGCGGCGTCCGC CGAGATCTCACAGCCTCTGCTGACTCTGCTGCGGCGTTTCGCGACGGAATCGGCGCGCGACGAGGCGCGCGTTTTTTGTG ACGAGCTGGTCGCGGAGGCGGCCCGTTCGCCGATGATTGAAGATGTGCCGGCTGGGGAGACGGCGCTCCGCGATCTCGAA GTTCGCGAGGAGTTCTACGAACCCGTGCCCGCCATAGCGCTTCCAAGTGAAGTGGAGATCAACTCGCTTGAAGAAGACGC GTCGGATCAGAATGCCGGGGTCGTTTACCGCTTCGGCGAGGGGATGAAGACCTCCCGACCGAGATTTCTCGACCGGCTTG CGCTCAAAACCAGGTTCGCCGAATACGAGCCGCGTGACGCCGAGCTTGACGACGCGACGTCTCCCGACGCCGTACCTTAC GAAGCCTTGTCTTGCGAGGTCTTGCCTTACGAAACCTTGTCTTACGAAGACGAGCCTGTCGAAGATGGACCTTACATCGT CTCGTCTTGTGAACCGAAGCGCGTCGAGCCGAGGTTTGATGAGCCGGCGCCCTACGATTCCCTCTACCGTGAGCCTGACT TTAGCGGGCTGAAAAATGCTCCGCCAGCATATCGCGAACCGCTGCTCAGCGATCTGCTTGCGGCGGCGTAG
Upstream 100 bases:
>100_bases GCGAAGGCAAATGGTTATGGTGAACTCTTTGTTAAGCGTCATGGTTTATTTTCTATGACCGGCACCGTTTCGCGATGTCG GTGCGTAAGCCGGAAACACC
Downstream 100 bases:
>100_bases CTCGTTCGCGCGAGCGAAGGTCTCCGCGGCGGGCGTTCGGCTGGGAAAACAACTCGCGGCCGTTTGCAGAAAGCGATCGG GCGCGCGCTACTCTGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MIIRQFLSWVRTASAGARAEATRALARAWLISDLSDDERAAAEGGLLLQLDDSSPLVRRAMADVFARSANAPPTIVRALS VDQPSVAIPVLEHSPLLTDADLVDIVATGSCEVQCAVARRVRVPVPVCAAIAEVGSAAAALELIENPGADLARVSWDRIV ERHGHLPAIREAMLALDGLPAVTRLLLAVKLSDSLARFVVARDWLSAERAGRTVSDARDRSIVDIVARAREDEMTCLVAH LRATGQLTAGLMLRALLSGTLGLFHHALADLSGLPFSRVTALVHDRGGASLPALLTRAGLPESAFPAFRAALEAHEEIGF VATVDGAVRLRRRMVEHVLTVCEAASAEISQPLLTLLRRFATESARDEARVFCDELVAEAARSPMIEDVPAGETALRDLE VREEFYEPVPAIALPSEVEINSLEEDASDQNAGVVYRFGEGMKTSRPRFLDRLALKTRFAEYEPRDAELDDATSPDAVPY EALSCEVLPYETLSYEDEPVEDGPYIVSSCEPKRVEPRFDEPAPYDSLYREPDFSGLKNAPPAYREPLLSDLLAAA
Sequences:
>Translated_556_residues MIIRQFLSWVRTASAGARAEATRALARAWLISDLSDDERAAAEGGLLLQLDDSSPLVRRAMADVFARSANAPPTIVRALS VDQPSVAIPVLEHSPLLTDADLVDIVATGSCEVQCAVARRVRVPVPVCAAIAEVGSAAAALELIENPGADLARVSWDRIV ERHGHLPAIREAMLALDGLPAVTRLLLAVKLSDSLARFVVARDWLSAERAGRTVSDARDRSIVDIVARAREDEMTCLVAH LRATGQLTAGLMLRALLSGTLGLFHHALADLSGLPFSRVTALVHDRGGASLPALLTRAGLPESAFPAFRAALEAHEEIGF VATVDGAVRLRRRMVEHVLTVCEAASAEISQPLLTLLRRFATESARDEARVFCDELVAEAARSPMIEDVPAGETALRDLE VREEFYEPVPAIALPSEVEINSLEEDASDQNAGVVYRFGEGMKTSRPRFLDRLALKTRFAEYEPRDAELDDATSPDAVPY EALSCEVLPYETLSYEDEPVEDGPYIVSSCEPKRVEPRFDEPAPYDSLYREPDFSGLKNAPPAYREPLLSDLLAAA >Mature_556_residues MIIRQFLSWVRTASAGARAEATRALARAWLISDLSDDERAAAEGGLLLQLDDSSPLVRRAMADVFARSANAPPTIVRALS VDQPSVAIPVLEHSPLLTDADLVDIVATGSCEVQCAVARRVRVPVPVCAAIAEVGSAAAALELIENPGADLARVSWDRIV ERHGHLPAIREAMLALDGLPAVTRLLLAVKLSDSLARFVVARDWLSAERAGRTVSDARDRSIVDIVARAREDEMTCLVAH LRATGQLTAGLMLRALLSGTLGLFHHALADLSGLPFSRVTALVHDRGGASLPALLTRAGLPESAFPAFRAALEAHEEIGF VATVDGAVRLRRRMVEHVLTVCEAASAEISQPLLTLLRRFATESARDEARVFCDELVAEAARSPMIEDVPAGETALRDLE VREEFYEPVPAIALPSEVEINSLEEDASDQNAGVVYRFGEGMKTSRPRFLDRLALKTRFAEYEPRDAELDDATSPDAVPY EALSCEVLPYETLSYEDEPVEDGPYIVSSCEPKRVEPRFDEPAPYDSLYREPDFSGLKNAPPAYREPLLSDLLAAA
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60291; Mature: 60291
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIRQFLSWVRTASAGARAEATRALARAWLISDLSDDERAAAEGGLLLQLDDSSPLVRRA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCHHHHHH MADVFARSANAPPTIVRALSVDQPSVAIPVLEHSPLLTDADLVDIVATGSCEVQCAVARR HHHHHHHCCCCCHHHHHEECCCCCCEEEEEECCCCCCCCCHHHHHEECCCCEEEEHHHHH VRVPVPVCAAIAEVGSAAAALELIENPGADLARVSWDRIVERHGHLPAIREAMLALDGLP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH AVTRLLLAVKLSDSLARFVVARDWLSAERAGRTVSDARDRSIVDIVARAREDEMTCLVAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH LRATGQLTAGLMLRALLSGTLGLFHHALADLSGLPFSRVTALVHDRGGASLPALLTRAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCC PESAFPAFRAALEAHEEIGFVATVDGAVRLRRRMVEHVLTVCEAASAEISQPLLTLLRRF CCHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATESARDEARVFCDELVAEAARSPMIEDVPAGETALRDLEVREEFYEPVPAIALPSEVEI HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC NSLEEDASDQNAGVVYRFGEGMKTSRPRFLDRLALKTRFAEYEPRDAELDDATSPDAVPY CCCHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH EALSCEVLPYETLSYEDEPVEDGPYIVSSCEPKRVEPRFDEPAPYDSLYREPDFSGLKNA HHHEEEECCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC PPAYREPLLSDLLAAA CCHHHHHHHHHHHHCC >Mature Secondary Structure MIIRQFLSWVRTASAGARAEATRALARAWLISDLSDDERAAAEGGLLLQLDDSSPLVRRA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCHHHHHH MADVFARSANAPPTIVRALSVDQPSVAIPVLEHSPLLTDADLVDIVATGSCEVQCAVARR HHHHHHHCCCCCHHHHHEECCCCCCEEEEEECCCCCCCCCHHHHHEECCCCEEEEHHHHH VRVPVPVCAAIAEVGSAAAALELIENPGADLARVSWDRIVERHGHLPAIREAMLALDGLP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH AVTRLLLAVKLSDSLARFVVARDWLSAERAGRTVSDARDRSIVDIVARAREDEMTCLVAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH LRATGQLTAGLMLRALLSGTLGLFHHALADLSGLPFSRVTALVHDRGGASLPALLTRAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCC PESAFPAFRAALEAHEEIGFVATVDGAVRLRRRMVEHVLTVCEAASAEISQPLLTLLRRF CCHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATESARDEARVFCDELVAEAARSPMIEDVPAGETALRDLEVREEFYEPVPAIALPSEVEI HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC NSLEEDASDQNAGVVYRFGEGMKTSRPRFLDRLALKTRFAEYEPRDAELDDATSPDAVPY CCCHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH EALSCEVLPYETLSYEDEPVEDGPYIVSSCEPKRVEPRFDEPAPYDSLYREPDFSGLKNA HHHEEEECCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC PPAYREPLLSDLLAAA CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA