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The map label for this gene is ycjD [C]

Identifier: 75675422

GI number: 75675422

Start: 1352807

End: 1353286

Strand: Direct

Name: ycjD [C]

Synonym: Nwi_1229

Alternate gene names: 75675422

Gene position: 1352807-1353286 (Clockwise)

Preceding gene: 75675421

Following gene: 75675423

Centisome position: 39.76

GC content: 62.5

Gene sequence:

>480_bases
ATGACCGAGCCGCGGGTTTTGCCCTCTCCCCTTGCGGGAGAGGGTGCCGAGCGCCATCGGCGCGAGGCGGGTGAGGGGGC
GTGTCGAAAAGCAACCGCGCGGAGCCTGCGCGCGTGGATGACCGATGCTGAGCGGAAGCTCTGGTTCGGGCTCAAGGACC
GGCGCTTTCAAGGACTCAAATTTCGGCGGCAAGTCTCGGTCGGACCTTACATCGCGGATTTTCTCTGCTTCGATCGGCGG
CTCGTCGTCGAGGTGGATGGCGGTCAGCACGCGGAATCGCTACGTGATGCTGATCGCGACCGCTGGTTTGCTGACAATGG
CTTTCGCACGCTCCGGTTCTGGAACAATGACGTGCTGTCGAATCTGGAAGGCGTGCTGACTGTAATTTCCGAGGGAGCGG
CGACCCCTCATCCGGCGTCTCGCTTGCGCTCGCCGCCACCCTCTCCCGCAAGGGGAGAGGGAAAAAAGGAGATGTTTTGA

Upstream 100 bases:

>100_bases
CCCTCTCCCGCAAGGGGAGAGGGAAAGAAGGAGTTCCCGCGATGACGTGGCGCGGGAGGTTCAAATCCTTGTCAAGGAGA
GGGACGGAGGACGTGGCGCG

Downstream 100 bases:

>100_bases
CGCGATGGGACAGTCGCTTCCCAAACCGGCGCTGCGGCCGATGCTGCCTACTGATGTTCCCGTGCTGGCCGCGATCTTTG
TCGCCAGCATCGAGGAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTEPRVLPSPLAGEGAERHRREAGEGACRKATARSLRAWMTDAERKLWFGLKDRRFQGLKFRRQVSVGPYIADFLCFDRR
LVVEVDGGQHAESLRDADRDRWFADNGFRTLRFWNNDVLSNLEGVLTVISEGAATPHPASRLRSPPPSPARGEGKKEMF

Sequences:

>Translated_159_residues
MTEPRVLPSPLAGEGAERHRREAGEGACRKATARSLRAWMTDAERKLWFGLKDRRFQGLKFRRQVSVGPYIADFLCFDRR
LVVEVDGGQHAESLRDADRDRWFADNGFRTLRFWNNDVLSNLEGVLTVISEGAATPHPASRLRSPPPSPARGEGKKEMF
>Mature_158_residues
TEPRVLPSPLAGEGAERHRREAGEGACRKATARSLRAWMTDAERKLWFGLKDRRFQGLKFRRQVSVGPYIADFLCFDRRL
VVEVDGGQHAESLRDADRDRWFADNGFRTLRFWNNDVLSNLEGVLTVISEGAATPHPASRLRSPPPSPARGEGKKEMF

Specific function: Unknown

COG id: COG2852

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjD and H.influenzae HI_0925 [H]

Homologues:

Organism=Escherichia coli, GI1787546, Length=111, Percent_Identity=46.8468468468468, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007569
- InterPro:   IPR011335 [H]

Pfam domain/function: PF04480 DUF559 [H]

EC number: NA

Molecular weight: Translated: 18009; Mature: 17877

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPRVLPSPLAGEGAERHRREAGEGACRKATARSLRAWMTDAERKLWFGLKDRRFQGLK
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FRRQVSVGPYIADFLCFDRRLVVEVDGGQHAESLRDADRDRWFADNGFRTLRFWNNDVLS
HHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCEECCCCEEEEEEECHHHHH
NLEGVLTVISEGAATPHPASRLRSPPPSPARGEGKKEMF
HHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEPRVLPSPLAGEGAERHRREAGEGACRKATARSLRAWMTDAERKLWFGLKDRRFQGLK
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FRRQVSVGPYIADFLCFDRRLVVEVDGGQHAESLRDADRDRWFADNGFRTLRFWNNDVLS
HHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCEECCCCEEEEEEECHHHHH
NLEGVLTVISEGAATPHPASRLRSPPPSPARGEGKKEMF
HHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]