| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675367
Identifier: 75675367
GI number: 75675367
Start: 1281451
End: 1281858
Strand: Direct
Name: 75675367
Synonym: Nwi_1174
Alternate gene names: NA
Gene position: 1281451-1281858 (Clockwise)
Preceding gene: 75675366
Following gene: 75675368
Centisome position: 37.67
GC content: 65.2
Gene sequence:
>408_bases ATGGGCGCACAGAAGGGCAAGGACCTGCTTCTGAAGATGAGCGACGGCTCGAGCTTCGTCACGGTGGCGGGGCTGCGCAG CCGCAGGATCGCGTTCAACGCGGAGATTGTCGATGTCACGGATGCGGAATCGACCGACCGCTGGCGCGAGTTGCTCGCGG GCGCGGGCGTCAGGCGTGCGTCGGTATCGGGACGCGGCCTGTTCAAGGACGCGGCGTCAGACGCCCTGGTGCGGCAGGCT TTCTTCGATGGCGCTATCAAATCGTGTCAGGTGGTGGTGCCGGACTTCGGCGCCATCGAGGGCATGTTCCAGATCGCGAG CCTCGAATTCGCGGGCGAGCACAATGGCGAGGTGACGTTCGATCTCGCGCTCGAATCCGCCGGCGCGTTGACGTTTACGG CGCTGTGA
Upstream 100 bases:
>100_bases GTCGCCGATATCCGGCGCGAGTCCGATGGCCGTACCTATCACGCACAGGTGCGATTTCACGCCGTGACCGAACCCACAAC CTGATCGCAAAGGAGGCGTC
Downstream 100 bases:
>100_bases GACGGAAGGATTCAGATGCCCAACAAATATCGTGGTGAGATCGGCGCAGAGCTTGGCGGGCGGCATCGCACGTTGGTGCT GACGCTTGGCGCGCTGGCCG
Product: Phage major tail protein, TP901-1
Products: NA
Alternate protein names: Phage Tail Protein -1 Family; Gene Transfer Agent Orf; Phage Protein; Tail Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGAQKGKDLLLKMSDGSSFVTVAGLRSRRIAFNAEIVDVTDAESTDRWRELLAGAGVRRASVSGRGLFKDAASDALVRQA FFDGAIKSCQVVVPDFGAIEGMFQIASLEFAGEHNGEVTFDLALESAGALTFTAL
Sequences:
>Translated_135_residues MGAQKGKDLLLKMSDGSSFVTVAGLRSRRIAFNAEIVDVTDAESTDRWRELLAGAGVRRASVSGRGLFKDAASDALVRQA FFDGAIKSCQVVVPDFGAIEGMFQIASLEFAGEHNGEVTFDLALESAGALTFTAL >Mature_134_residues GAQKGKDLLLKMSDGSSFVTVAGLRSRRIAFNAEIVDVTDAESTDRWRELLAGAGVRRASVSGRGLFKDAASDALVRQAF FDGAIKSCQVVVPDFGAIEGMFQIASLEFAGEHNGEVTFDLALESAGALTFTAL
Specific function: Unknown
COG id: COG5437
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14290; Mature: 14159
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAQKGKDLLLKMSDGSSFVTVAGLRSRRIAFNAEIVDVTDAESTDRWRELLAGAGVRRA CCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCEEEEECCCCCHHHHHHHHHCCCCEEE SVSGRGLFKDAASDALVRQAFFDGAIKSCQVVVPDFGAIEGMFQIASLEFAGEHNGEVTF CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHEEEEEECCCCCCEEEE DLALESAGALTFTAL EEEECCCCCEEEEEC >Mature Secondary Structure GAQKGKDLLLKMSDGSSFVTVAGLRSRRIAFNAEIVDVTDAESTDRWRELLAGAGVRRA CCCCCCEEEEEECCCCCEEEEECCCCCEEEECCEEEEECCCCCHHHHHHHHHCCCCEEE SVSGRGLFKDAASDALVRQAFFDGAIKSCQVVVPDFGAIEGMFQIASLEFAGEHNGEVTF CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHEEEEEECCCCCCEEEE DLALESAGALTFTAL EEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA