| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675356
Identifier: 75675356
GI number: 75675356
Start: 1274169
End: 1274816
Strand: Direct
Name: 75675356
Synonym: Nwi_1163
Alternate gene names: NA
Gene position: 1274169-1274816 (Clockwise)
Preceding gene: 75675355
Following gene: 75675357
Centisome position: 37.45
GC content: 68.83
Gene sequence:
>648_bases ATGCACGCTCCGTTGTCATCCGTGTCCCGCCTGTCGTTCTTCAGCGATGGCATGGTCGAAGGTTATGCCAGCCTGTTCGG CGAGATCGATCAGGCGCGCGACATGATGATGCCCGGTGCGTTCACGCAGACGCTGAAAACGCGGGGGCTGCGCAGGATCC CGATGCTGTTCCAGCATGATCCCGCGGAGCCGGTCGGCGTCTGGCTCGAACTGCACGAGGATTTTCGCGGCCTCTGGGCG CGGGGAAAGCTGATCCCCGACGTGACGCGCGCGCGCGAGTTGCTTTCTTTAGTCGAGGCCGGCGCGGTGGATGGACTGTC GATCGGCTATCGCACCGTGCGCGGCCGGATCGAGCCGCGCACGCGCGTGCGTCATCTCCATCAGGTCGATCTGTGGGAGA TTTCGATCGTCACCTTCCCGCTGCTGGCGGGAGCGCGTGTCCGCGCCGTGAAGCAGGCGACGCCCCCGTCGCCGCGCTCG CGTGCGCGGACACAGGCCGAGCGCGAATGGCGGAGCATGAGGCAGGCCGCGGATGAACCGGCGCCGTCGCTCCGCCCGCG CCCGGTGGTGACGTCGCTGCGTGGCAGGGAAGGACGACGCGTGGCGCTGTGCGGCGCGATGCGCGCGCCGCTGGCGGGAG CACGCTGA
Upstream 100 bases:
>100_bases CGCGGCCGCAAGGGATGACGTTCATCCGGTAACGTCCGGCGCGCCACGCGCCGTCTTCAAATTCAAGAATTCCACTCCCT TGCCCGCTGCGAGGCCGATC
Downstream 100 bases:
>100_bases TGACAAGTCATGAAAGTGCATTCGAAGCGGCTCAGCGCGCGTGTTGGATGCGGCCTGACGCCTACAGATGGATCCGGCCG GACGCCGTGCGCTTTCTCGC
Product: peptidase U35, phage prohead HK97
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Prohead Protease; Phage Pro-Head Protease
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHDPAEPVGVWLELHEDFRGLWA RGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPRTRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRS RARTQAEREWRSMRQAADEPAPSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR
Sequences:
>Translated_215_residues MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHDPAEPVGVWLELHEDFRGLWA RGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPRTRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRS RARTQAEREWRSMRQAADEPAPSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR >Mature_215_residues MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHDPAEPVGVWLELHEDFRGLWA RGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPRTRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRS RARTQAEREWRSMRQAADEPAPSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24052; Mature: 24052
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHD CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHCCC PAEPVGVWLELHEDFRGLWARGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPR CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH TRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRSRARTQAEREWRSMRQAADEP HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC APSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR CCCCCCCCHHHHCCCCCCCEEEEEHHHHCCCCCCC >Mature Secondary Structure MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHD CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHCCC PAEPVGVWLELHEDFRGLWARGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPR CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH TRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRSRARTQAEREWRSMRQAADEP HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC APSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR CCCCCCCCHHHHCCCCCCCEEEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA