Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75675356

Identifier: 75675356

GI number: 75675356

Start: 1274169

End: 1274816

Strand: Direct

Name: 75675356

Synonym: Nwi_1163

Alternate gene names: NA

Gene position: 1274169-1274816 (Clockwise)

Preceding gene: 75675355

Following gene: 75675357

Centisome position: 37.45

GC content: 68.83

Gene sequence:

>648_bases
ATGCACGCTCCGTTGTCATCCGTGTCCCGCCTGTCGTTCTTCAGCGATGGCATGGTCGAAGGTTATGCCAGCCTGTTCGG
CGAGATCGATCAGGCGCGCGACATGATGATGCCCGGTGCGTTCACGCAGACGCTGAAAACGCGGGGGCTGCGCAGGATCC
CGATGCTGTTCCAGCATGATCCCGCGGAGCCGGTCGGCGTCTGGCTCGAACTGCACGAGGATTTTCGCGGCCTCTGGGCG
CGGGGAAAGCTGATCCCCGACGTGACGCGCGCGCGCGAGTTGCTTTCTTTAGTCGAGGCCGGCGCGGTGGATGGACTGTC
GATCGGCTATCGCACCGTGCGCGGCCGGATCGAGCCGCGCACGCGCGTGCGTCATCTCCATCAGGTCGATCTGTGGGAGA
TTTCGATCGTCACCTTCCCGCTGCTGGCGGGAGCGCGTGTCCGCGCCGTGAAGCAGGCGACGCCCCCGTCGCCGCGCTCG
CGTGCGCGGACACAGGCCGAGCGCGAATGGCGGAGCATGAGGCAGGCCGCGGATGAACCGGCGCCGTCGCTCCGCCCGCG
CCCGGTGGTGACGTCGCTGCGTGGCAGGGAAGGACGACGCGTGGCGCTGTGCGGCGCGATGCGCGCGCCGCTGGCGGGAG
CACGCTGA

Upstream 100 bases:

>100_bases
CGCGGCCGCAAGGGATGACGTTCATCCGGTAACGTCCGGCGCGCCACGCGCCGTCTTCAAATTCAAGAATTCCACTCCCT
TGCCCGCTGCGAGGCCGATC

Downstream 100 bases:

>100_bases
TGACAAGTCATGAAAGTGCATTCGAAGCGGCTCAGCGCGCGTGTTGGATGCGGCCTGACGCCTACAGATGGATCCGGCCG
GACGCCGTGCGCTTTCTCGC

Product: peptidase U35, phage prohead HK97

Products: NA

Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Prohead Protease; Phage Pro-Head Protease

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHDPAEPVGVWLELHEDFRGLWA
RGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPRTRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRS
RARTQAEREWRSMRQAADEPAPSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR

Sequences:

>Translated_215_residues
MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHDPAEPVGVWLELHEDFRGLWA
RGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPRTRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRS
RARTQAEREWRSMRQAADEPAPSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR
>Mature_215_residues
MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHDPAEPVGVWLELHEDFRGLWA
RGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPRTRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRS
RARTQAEREWRSMRQAADEPAPSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24052; Mature: 24052

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHD
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHCCC
PAEPVGVWLELHEDFRGLWARGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPR
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
TRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRSRARTQAEREWRSMRQAADEP
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
APSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR
CCCCCCCCHHHHCCCCCCCEEEEEHHHHCCCCCCC
>Mature Secondary Structure
MHAPLSSVSRLSFFSDGMVEGYASLFGEIDQARDMMMPGAFTQTLKTRGLRRIPMLFQHD
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHCCC
PAEPVGVWLELHEDFRGLWARGKLIPDVTRARELLSLVEAGAVDGLSIGYRTVRGRIEPR
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
TRVRHLHQVDLWEISIVTFPLLAGARVRAVKQATPPSPRSRARTQAEREWRSMRQAADEP
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
APSLRPRPVVTSLRGREGRRVALCGAMRAPLAGAR
CCCCCCCCHHHHCCCCCCCEEEEEHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA