| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675217
Identifier: 75675217
GI number: 75675217
Start: 1120814
End: 1121653
Strand: Direct
Name: 75675217
Synonym: Nwi_1024
Alternate gene names: NA
Gene position: 1120814-1121653 (Clockwise)
Preceding gene: 75675214
Following gene: 75675218
Centisome position: 32.94
GC content: 59.17
Gene sequence:
>840_bases ATGGCCTTTAAGGATGTTCTTCTGACACTGATGAGCTATCCGGAGCCGACACCCGTCTCGGTGGCGGACGATGCGGTTTC GGTAGCCGCCGCCCTCGGTGCTCATCTCGCGGCGATTTCCTGCGAAGTCCATCTGGAAGCGCCAGGTAATTTCCTTGCCA AGGCGATCATCGACGTACCCGGCATCGTGGCTCATGAATCGGCAAAGAGCCGAGAAAATGCTCAGGGTCTGCTCGCCGCG CTCGAAGCGGCGGCTGCTAGGTCCGGTGTGTCGCATGAGGCCATCTTGGAGAAATGCGCGGCTCACAAGACCCCGGCGAT GCTGGTCGAGTATGCGCGGCTTCGCGATCTTACGATCATGCCGGAGCCGGAGGCGTTCGACCTGTGGTACGCGGAGGAGA TCATCTTCGAATCGGGAAGGCCGACCCTGATCCTGCCTACTGTCCCGCTGTCACGTCCTATCCAGTTTGGCTCCATCGGC GTGGCCTGGGATTTCAGCCGTACCGCGACGCGTGCGGTTTCGGACGCGCTTCCCCTTCTTGAAAAGGCGGAGAAGGTCTG CATCTTTATCGTCAGGAACGAGAAATCCTTTAATTCCCAACGTTCTCCTGATGAACTGGCGGAGAATCTTGCCCGCCACG GTATCGATGCCGTTCTGGATGAGGTCGACGCCGATGGCAGGCCGATCGGCGAGGTTTTCAGGGCATACGTGCTTTCGCGT GGGATCGACCTGCTTGTGATGGGGGCTTATGGGCAGTCCAGATGGCGGGAGTTCGTACTTGGAGGCGCAACCAGGAGTCT GCTGTCGAAACCGCCTGTTCCAGTTTTCTTCTCGCGTTGA
Upstream 100 bases:
>100_bases ATAGCCAGTTCAACAGGTTCTCAGGCTCGATCCATTGCGATGGATCAAGATATGCAGTTCCTTGAAACGTTAGTTCTGAC CTCATAGAAAAGGTAAGATC
Downstream 100 bases:
>100_bases TGACGCATGGTCGACATCGCCAGCCGGGCGAACCGGATGAACTCTGCTCAGGGGGCACGCCGCGCATCTCGAGAAATTCA TGGCTTGTCCTAAGATATGG
Product: universal stress protein UspA
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MAFKDVLLTLMSYPEPTPVSVADDAVSVAAALGAHLAAISCEVHLEAPGNFLAKAIIDVPGIVAHESAKSRENAQGLLAA LEAAAARSGVSHEAILEKCAAHKTPAMLVEYARLRDLTIMPEPEAFDLWYAEEIIFESGRPTLILPTVPLSRPIQFGSIG VAWDFSRTATRAVSDALPLLEKAEKVCIFIVRNEKSFNSQRSPDELAENLARHGIDAVLDEVDADGRPIGEVFRAYVLSR GIDLLVMGAYGQSRWREFVLGGATRSLLSKPPVPVFFSR
Sequences:
>Translated_279_residues MAFKDVLLTLMSYPEPTPVSVADDAVSVAAALGAHLAAISCEVHLEAPGNFLAKAIIDVPGIVAHESAKSRENAQGLLAA LEAAAARSGVSHEAILEKCAAHKTPAMLVEYARLRDLTIMPEPEAFDLWYAEEIIFESGRPTLILPTVPLSRPIQFGSIG VAWDFSRTATRAVSDALPLLEKAEKVCIFIVRNEKSFNSQRSPDELAENLARHGIDAVLDEVDADGRPIGEVFRAYVLSR GIDLLVMGAYGQSRWREFVLGGATRSLLSKPPVPVFFSR >Mature_278_residues AFKDVLLTLMSYPEPTPVSVADDAVSVAAALGAHLAAISCEVHLEAPGNFLAKAIIDVPGIVAHESAKSRENAQGLLAAL EAAAARSGVSHEAILEKCAAHKTPAMLVEYARLRDLTIMPEPEAFDLWYAEEIIFESGRPTLILPTVPLSRPIQFGSIGV AWDFSRTATRAVSDALPLLEKAEKVCIFIVRNEKSFNSQRSPDELAENLARHGIDAVLDEVDADGRPIGEVFRAYVLSRG IDLLVMGAYGQSRWREFVLGGATRSLLSKPPVPVFFSR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30175; Mature: 30044
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKDVLLTLMSYPEPTPVSVADDAVSVAAALGAHLAAISCEVHLEAPGNFLAKAIIDVP CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHCCC GIVAHESAKSRENAQGLLAALEAAAARSGVSHEAILEKCAAHKTPAMLVEYARLRDLTIM CCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCEEC PEPEAFDLWYAEEIIFESGRPTLILPTVPLSRPIQFGSIGVAWDFSRTATRAVSDALPLL CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH EKAEKVCIFIVRNEKSFNSQRSPDELAENLARHGIDAVLDEVDADGRPIGEVFRAYVLSR HCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHC GIDLLVMGAYGQSRWREFVLGGATRSLLSKPPVPVFFSR CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure AFKDVLLTLMSYPEPTPVSVADDAVSVAAALGAHLAAISCEVHLEAPGNFLAKAIIDVP CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHCCC GIVAHESAKSRENAQGLLAALEAAAARSGVSHEAILEKCAAHKTPAMLVEYARLRDLTIM CCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCEEC PEPEAFDLWYAEEIIFESGRPTLILPTVPLSRPIQFGSIGVAWDFSRTATRAVSDALPLL CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH EKAEKVCIFIVRNEKSFNSQRSPDELAENLARHGIDAVLDEVDADGRPIGEVFRAYVLSR HCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHC GIDLLVMGAYGQSRWREFVLGGATRSLLSKPPVPVFFSR CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA