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The map label for this gene is pepF [H]

Identifier: 75675186

GI number: 75675186

Start: 1089251

End: 1091128

Strand: Direct

Name: pepF [H]

Synonym: Nwi_0993

Alternate gene names: 75675186

Gene position: 1089251-1091128 (Clockwise)

Preceding gene: 75675182

Following gene: 75675187

Centisome position: 32.02

GC content: 63.26

Gene sequence:

>1878_bases
ATGGCTGCGCGTTCGTCCTCCGCCTCCCGCAAATCCGCGACCGCTCGCAAACCCGTCTCCCGCCGCAAGCCGGCCAGGAA
AGCGTCCGCCGCGAAATCGGGCGCGGGGAGGCTGCCGGAGTGGAATCTCGCGGATCTCTATGCCGGGATTGACGCGCCCG
AGATCGCGCGCGATCTCGACCGGATCGACGCTGAATGCAGGGCGTTCGAGGCGGATTACAAGGGCAGGCTCGCGACCGAA
ACGTCGGGCCCGGAGGGCGGCGCCTGGCTCGCGGGAGCCGTGCGGCGCTATGAGGCGATCGATGATCTCGCGGGCCGGCT
CGCCTCCTTCGCGGGTTTGATTCATGCCGGCGACAGCGTTGATCCCGCGATCTCGAAATTCTATGGCGACGTTTCGGAAC
GTCTGACGGCGGCGTCACTGCACCTGCTGTTTTTTCCGCTGGAGCTCAACCGTCTCGACGACGACGTGATCGAGCGCGCC
ATGCAGACGCCGGAACTCGGGCATTATCGCCCCTGGATCGAGGACAGCCGCAAGGACAAGCCGTACCAGCTTGAGGATCG
TCTGGAGCAGCTCTTTCATGAGAAGTCGCAGACCGGCTACTCGGCATGGAACAGGTTGTTCGACCAGACCATTGCAGGGC
TGCGCTTCAAGGTCGGAGCAAAAGAGCTTGCGATCGAACCGGCGCTGAACCTGTTGCAGGATCGCTCGCCGGAGAAACGC
AAGGCGGCGGGGCAGGCGCTGGCGAAGACGTTCAAGGCCAACGAGCGAACCTTCGCGCTCATCACCAATACGCTCGCGAA
GGACAAGGATATTTCCGACCGCTGGCGCGGTTTTCAGGACGTGGCGGACTCACGCCATCTCAACAATCGCGTCGAGCGCG
AGGTGGTGGACGCGCTTGTGGCTTCGGTGCGTGCGGCCTATCCCCGGCTGTCGCATCGTTACTACGCGCTGAAGGCGCGC
TGGTTCAAAAAGAAAAAGCTCGCGCACTGGGACCGCAACGCGCCGCTGCCGTTCGCCGCCACCGGAGTCATTCCCTGGGG
CGATGCGCGCAAGATGGTTCTGAGTGCCTATGGCGAATTCTCGCCCGAGATGGCCGGCATCGCCGAGCGATTCTTTACCG
ACCGGTGGATCGACGCGCCGGTGCGTCCCGGCAAGGCGCCGGGAGCGTTCTCGCACCCGACCACGCCATCCGCGCATCCC
TACGTGCTGATGAATTACCAGGGCAAGCCGCGCGATGTGATGACCCTCGCGCATGAGCTGGGGCATGGCGTTCATCAGGT
GCTTGCCGCGAAGAATGGCGCGCTGATGGCGCCGACGCCGCTGACGCTCGCGGAAACCGCTTCGGTCTTTGGTGAGATGC
TGACCTTCAAGCGGCTGCTGGCGCAAACGAAGAACGCGAAGCAGCGGCAGGCGCTTCTGGCCGGCAAGGTCGAGGACATG
ATCAACACCGTGGTGCGGCAGATCGCCTTCTATACGTTCGAGCGCGCGGTTCATACCGAGCGCAAGGACGGCGAACTCAC
CGCGGAGCGCCTCGGTCAGCTCTGGCTCAGCGTGCAGGGGGAGAGTCTTGGGCCGGCGATCGAGATCAAGCCGGGGTACG
AGACGTTCTGGATGTACATTCCTCACTTCATCCATTCGCCGTTCTATGTCTATGCCTACGCGTTCGGCGATTGCCTCGTG
AATTCGCTCTATGCGGTTTATGAACACGCGTCCGAGGGTTTCGCGGAGCGTTATCTGGCGATGCTCGCCGCCGGCGGCAC
CAAGCACTATTCCGAACTGTTGAAGCCGTTCGAGCTCGACGCCAGGGATCCGAAATTCTGGGATGGCGGGTTATCGGTCA
TTGCCGGCATGATCGACGAACTGGAGGGGACGGGATAG

Upstream 100 bases:

>100_bases
CCGCCGCGCCGTGTCGTCATAACTGCTCTCCTGCTGATCGGTGTTCATCCTGATCGGTGTTCATAGAGCTTGGTGTTCAT
AGAGAAAGTCTGGATCGATA

Downstream 100 bases:

>100_bases
AGCGGCCCATCACCGCCAAGCGGCGTGGCAAATTGGCGCAGGCTCGTATGGCGAGCCTGCGAAAAACTAAACCCACAACT
CCAACGTGCATTTCTCAGGC

Product: peptidase M3B, oligoendopeptidase-related clade 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 624

Protein sequence:

>625_residues
MAARSSSASRKSATARKPVSRRKPARKASAAKSGAGRLPEWNLADLYAGIDAPEIARDLDRIDAECRAFEADYKGRLATE
TSGPEGGAWLAGAVRRYEAIDDLAGRLASFAGLIHAGDSVDPAISKFYGDVSERLTAASLHLLFFPLELNRLDDDVIERA
MQTPELGHYRPWIEDSRKDKPYQLEDRLEQLFHEKSQTGYSAWNRLFDQTIAGLRFKVGAKELAIEPALNLLQDRSPEKR
KAAGQALAKTFKANERTFALITNTLAKDKDISDRWRGFQDVADSRHLNNRVEREVVDALVASVRAAYPRLSHRYYALKAR
WFKKKKLAHWDRNAPLPFAATGVIPWGDARKMVLSAYGEFSPEMAGIAERFFTDRWIDAPVRPGKAPGAFSHPTTPSAHP
YVLMNYQGKPRDVMTLAHELGHGVHQVLAAKNGALMAPTPLTLAETASVFGEMLTFKRLLAQTKNAKQRQALLAGKVEDM
INTVVRQIAFYTFERAVHTERKDGELTAERLGQLWLSVQGESLGPAIEIKPGYETFWMYIPHFIHSPFYVYAYAFGDCLV
NSLYAVYEHASEGFAERYLAMLAAGGTKHYSELLKPFELDARDPKFWDGGLSVIAGMIDELEGTG

Sequences:

>Translated_625_residues
MAARSSSASRKSATARKPVSRRKPARKASAAKSGAGRLPEWNLADLYAGIDAPEIARDLDRIDAECRAFEADYKGRLATE
TSGPEGGAWLAGAVRRYEAIDDLAGRLASFAGLIHAGDSVDPAISKFYGDVSERLTAASLHLLFFPLELNRLDDDVIERA
MQTPELGHYRPWIEDSRKDKPYQLEDRLEQLFHEKSQTGYSAWNRLFDQTIAGLRFKVGAKELAIEPALNLLQDRSPEKR
KAAGQALAKTFKANERTFALITNTLAKDKDISDRWRGFQDVADSRHLNNRVEREVVDALVASVRAAYPRLSHRYYALKAR
WFKKKKLAHWDRNAPLPFAATGVIPWGDARKMVLSAYGEFSPEMAGIAERFFTDRWIDAPVRPGKAPGAFSHPTTPSAHP
YVLMNYQGKPRDVMTLAHELGHGVHQVLAAKNGALMAPTPLTLAETASVFGEMLTFKRLLAQTKNAKQRQALLAGKVEDM
INTVVRQIAFYTFERAVHTERKDGELTAERLGQLWLSVQGESLGPAIEIKPGYETFWMYIPHFIHSPFYVYAYAFGDCLV
NSLYAVYEHASEGFAERYLAMLAAGGTKHYSELLKPFELDARDPKFWDGGLSVIAGMIDELEGTG
>Mature_624_residues
AARSSSASRKSATARKPVSRRKPARKASAAKSGAGRLPEWNLADLYAGIDAPEIARDLDRIDAECRAFEADYKGRLATET
SGPEGGAWLAGAVRRYEAIDDLAGRLASFAGLIHAGDSVDPAISKFYGDVSERLTAASLHLLFFPLELNRLDDDVIERAM
QTPELGHYRPWIEDSRKDKPYQLEDRLEQLFHEKSQTGYSAWNRLFDQTIAGLRFKVGAKELAIEPALNLLQDRSPEKRK
AAGQALAKTFKANERTFALITNTLAKDKDISDRWRGFQDVADSRHLNNRVEREVVDALVASVRAAYPRLSHRYYALKARW
FKKKKLAHWDRNAPLPFAATGVIPWGDARKMVLSAYGEFSPEMAGIAERFFTDRWIDAPVRPGKAPGAFSHPTTPSAHPY
VLMNYQGKPRDVMTLAHELGHGVHQVLAAKNGALMAPTPLTLAETASVFGEMLTFKRLLAQTKNAKQRQALLAGKVEDMI
NTVVRQIAFYTFERAVHTERKDGELTAERLGQLWLSVQGESLGPAIEIKPGYETFWMYIPHFIHSPFYVYAYAFGDCLVN
SLYAVYEHASEGFAERYLAMLAAGGTKHYSELLKPFELDARDPKFWDGGLSVIAGMIDELEGTG

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69695; Mature: 69564

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARSSSASRKSATARKPVSRRKPARKASAAKSGAGRLPEWNLADLYAGIDAPEIARDLD
CCCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHH
RIDAECRAFEADYKGRLATETSGPEGGAWLAGAVRRYEAIDDLAGRLASFAGLIHAGDSV
HHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DPAISKFYGDVSERLTAASLHLLFFPLELNRLDDDVIERAMQTPELGHYRPWIEDSRKDK
CHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PYQLEDRLEQLFHEKSQTGYSAWNRLFDQTIAGLRFKVGAKELAIEPALNLLQDRSPEKR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCHHH
KAAGQALAKTFKANERTFALITNTLAKDKDISDRWRGFQDVADSRHLNNRVEREVVDALV
HHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ASVRAAYPRLSHRYYALKARWFKKKKLAHWDRNAPLPFAATGVIPWGDARKMVLSAYGEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCC
SPEMAGIAERFFTDRWIDAPVRPGKAPGAFSHPTTPSAHPYVLMNYQGKPRDVMTLAHEL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
GHGVHQVLAAKNGALMAPTPLTLAETASVFGEMLTFKRLLAQTKNAKQRQALLAGKVEDM
HHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
INTVVRQIAFYTFERAVHTERKDGELTAERLGQLWLSVQGESLGPAIEIKPGYETFWMYI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
PHFIHSPFYVYAYAFGDCLVNSLYAVYEHASEGFAERYLAMLAAGGTKHYSELLKPFELD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
ARDPKFWDGGLSVIAGMIDELEGTG
CCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AARSSSASRKSATARKPVSRRKPARKASAAKSGAGRLPEWNLADLYAGIDAPEIARDLD
CCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHH
RIDAECRAFEADYKGRLATETSGPEGGAWLAGAVRRYEAIDDLAGRLASFAGLIHAGDSV
HHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DPAISKFYGDVSERLTAASLHLLFFPLELNRLDDDVIERAMQTPELGHYRPWIEDSRKDK
CHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PYQLEDRLEQLFHEKSQTGYSAWNRLFDQTIAGLRFKVGAKELAIEPALNLLQDRSPEKR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCHHH
KAAGQALAKTFKANERTFALITNTLAKDKDISDRWRGFQDVADSRHLNNRVEREVVDALV
HHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ASVRAAYPRLSHRYYALKARWFKKKKLAHWDRNAPLPFAATGVIPWGDARKMVLSAYGEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCC
SPEMAGIAERFFTDRWIDAPVRPGKAPGAFSHPTTPSAHPYVLMNYQGKPRDVMTLAHEL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
GHGVHQVLAAKNGALMAPTPLTLAETASVFGEMLTFKRLLAQTKNAKQRQALLAGKVEDM
HHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
INTVVRQIAFYTFERAVHTERKDGELTAERLGQLWLSVQGESLGPAIEIKPGYETFWMYI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
PHFIHSPFYVYAYAFGDCLVNSLYAVYEHASEGFAERYLAMLAAGGTKHYSELLKPFELD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
ARDPKFWDGGLSVIAGMIDELEGTG
CCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]