| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675166
Identifier: 75675166
GI number: 75675166
Start: 1069290
End: 1069658
Strand: Direct
Name: 75675166
Synonym: Nwi_0973
Alternate gene names: NA
Gene position: 1069290-1069658 (Clockwise)
Preceding gene: 75675165
Following gene: 75675168
Centisome position: 31.43
GC content: 64.77
Gene sequence:
>369_bases ATGCTCGCCGATGCGCTGGGCCGACCCTTGCGTTTCATCGTCACCGCCGGGCAGGTCGGAGACATCACACAAGCCCCCGC GCTGCTCGAAGCCCAGGCCGGGGACGCCGTGCTGGCCGACAAGGCTTATGACAGCAACGCCTTGCGTGCACTCATCGCCG GCATGGGCGCCGAAGCGGTGATCCCCTCAAACAGGACGCGCAAAATCATCATCCCGCATGACGCCGGTCTCTACAAGCAC CGCAACCGCATCGAGCGCTGCTTCAACCGTCTCAAGCACTTCCGCCGTTTCGCCACCCGCTACGACAGGCGCACCGTTCA CTTCACGGGCTTCGTTCACCTGGCCGCAGCCCTGATCTGGCTGCCGTGA
Upstream 100 bases:
>100_bases CAACCATCGTTCGAGCCCATCAGCAGGCGGCTACCGGAAAAGGGGGGCCAAGGATCAGGCGCTGGGGCGTTCCCGAGGTG GACTGACCACCAAGGTCCAC
Downstream 100 bases:
>100_bases ATGTCGATCCGGCCTAGAGCATGATCCGATCACGTTGAATCGGACCATGCTCTCAAAATGGTTGTCTGGTCGCATTTTCG TGCGGCGAATCGGTATCCAC
Product: transposase, IS4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MLADALGRPLRFIVTAGQVGDITQAPALLEAQAGDAVLADKAYDSNALRALIAGMGAEAVIPSNRTRKIIIPHDAGLYKH RNRIERCFNRLKHFRRFATRYDRRTVHFTGFVHLAAALIWLP
Sequences:
>Translated_122_residues MLADALGRPLRFIVTAGQVGDITQAPALLEAQAGDAVLADKAYDSNALRALIAGMGAEAVIPSNRTRKIIIPHDAGLYKH RNRIERCFNRLKHFRRFATRYDRRTVHFTGFVHLAAALIWLP >Mature_122_residues MLADALGRPLRFIVTAGQVGDITQAPALLEAQAGDAVLADKAYDSNALRALIAGMGAEAVIPSNRTRKIIIPHDAGLYKH RNRIERCFNRLKHFRRFATRYDRRTVHFTGFVHLAAALIWLP
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 13590; Mature: 13590
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLADALGRPLRFIVTAGQVGDITQAPALLEAQAGDAVLADKAYDSNALRALIAGMGAEAV CCCCHHCCCEEEEEECCCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCEE IPSNRTRKIIIPHDAGLYKHRNRIERCFNRLKHFRRFATRYDRRTVHFTGFVHLAAALIW CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHC LP CC >Mature Secondary Structure MLADALGRPLRFIVTAGQVGDITQAPALLEAQAGDAVLADKAYDSNALRALIAGMGAEAV CCCCHHCCCEEEEEECCCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCEE IPSNRTRKIIIPHDAGLYKHRNRIERCFNRLKHFRRFATRYDRRTVHFTGFVHLAAALIW CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHC LP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8126444 [H]