| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675157
Identifier: 75675157
GI number: 75675157
Start: 1059788
End: 1061308
Strand: Direct
Name: 75675157
Synonym: Nwi_0964
Alternate gene names: NA
Gene position: 1059788-1061308 (Clockwise)
Preceding gene: 75675156
Following gene: 75675160
Centisome position: 31.15
GC content: 56.15
Gene sequence:
>1521_bases ATGCACATCGACCTCATAGAGGATATGGATACTTTCAGCCGGTTGAGAGAGAACTGGGACGAGGTCTATGATTCCGATCC CTATGCAACGCTGTTCCTGTCCTGGACCTGGCTCCTTTCCTGGCTGGAAAAGCTTTCCACGCCATGGATCGTTCTCGCGG CCAAAAGAAGCGGATCAGATGCTCACTATGTCGCGTTCTTTCCACTTCGGATCGACACCAGGATCGATGGAGAGGGGCGT CTTTCCAACGATCTTCGAATGGCCGGTAGCCACGCCGCAGACTATTGCGGGTTGATCTCGATTCCCGATTTCGAATCAGA CGCGATCACCGCGTTCGCCCAACAGATCAAGCGCTTGAACTGGACCGACTTTGTTCTCGGAAACTTTAGTGGATCTGACG CCAGGTTCACAAAGCTCGTATCATGCTTTTCCCAATCAAAGTTCACCATCAGCCAGATGGATCGCGTCAACAAGACAGAT CAGGTTGACAATGCGTTATGTCCGTATGTGGAACTGCCGGACGACTGGGATACGTATCTTGAAACCCTCAGCGCCAATAC GCGGCAGAAGCTGCGCCGCCTGCTGCGCGTGGTCGATGCCAATAGCGATTACCGCATCACTCACGCGACCGCCGATACGG TGGCGACGGATCTGGATACGCTTCTGCGTTTCTGGGAGATCAAATGGCGGCCCAGAAAGGGAAAGCTTACAGACAGCCTC GTTCGCGCGCATCGCGCCATGCTTTCTCGCAGCTTCGATCGCGGCTTGCTTTTTCTGCCGACGCTCTGGGCGGGCGACCG TCCCCTTGCCGCTCTGGCCATCCTGGTGGATGAACGGAAGAAGTCATTCCTGTTTTATATCACGGGACGGGACGAGGAAT TCGCGGGTCCTCAGCCCGGGCTTATCCTGCACGGCCACAGTATTCGCTACGCCATCTCATGCGGGATGAAGCGTTATGAT TTTCTGCGAGGAAACGAGCGTTACAAGTACTCATTCGGCGTCAATGAGCGTCGGCTTCATTGCTACGTTGTCGCGACGCG AAGCGGTCGCAATCTGGGTGGACGACTTGACGTACGGGCGATCGCAGACGCCTTGAAGGAAGCGACGGATCTGCATCAGG AAGGGAAGATCGATCAGGCGGCGCGGGCCTATCGTCAGATACTCGAAACGGATCCGCGAAATGAAGGGGCGCTCCATCGC TACGGTCAGCTTCTTGCCAGAAGAGGCGATCACGTTGCTGCAAAACGCATGTTCAAGCTGCTCACCCGAATGAGAACCGA CACCTACAAGCCATGGCTTCTGCTCGGGCAATCCTGCGAAGCCATGGGCCAGTTTCTCGAAGCGGCGAACGCTTATCGCG AGGTGATCCGGTTGCAGCCGGCCGTGCCGGACATTTTCAGCAAGCTCGTCAACGTTCTTTTCAAGGCCGGCCGCATTGAG GATGCGAGGCAGGCACTCATGACCAGCTATGGAGTCGGATCGACGGGTGCGGAAGGTGGTGCATCGTTCAGCATTCACTG A
Upstream 100 bases:
>100_bases GCCGATCGATGACAGCATGTCACGGGCGTTTCGCGAGCGATAGGAGCACGGCGGGGGGACGCAAAAGAGCAGACAACATG AGCGCGCAAAGAGGGCTCCA
Downstream 100 bases:
>100_bases ACGGAATGCCTGAACGGATGACGCCGATCCTGTTATGGGTGGGCTGATGTTGTGTTTTGATGGATGCTCGCGCGAACCGG TCTGCTCTGCGCGGCTTCGA
Product: TPR and WD-40 repeat-containing protein
Products: NA
Alternate protein names: Adenylate Cyclase Protein; TPR Repeat-Containing Protein; TPR And WD-40 Repeat-Containing Protein
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MHIDLIEDMDTFSRLRENWDEVYDSDPYATLFLSWTWLLSWLEKLSTPWIVLAAKRSGSDAHYVAFFPLRIDTRIDGEGR LSNDLRMAGSHAADYCGLISIPDFESDAITAFAQQIKRLNWTDFVLGNFSGSDARFTKLVSCFSQSKFTISQMDRVNKTD QVDNALCPYVELPDDWDTYLETLSANTRQKLRRLLRVVDANSDYRITHATADTVATDLDTLLRFWEIKWRPRKGKLTDSL VRAHRAMLSRSFDRGLLFLPTLWAGDRPLAALAILVDERKKSFLFYITGRDEEFAGPQPGLILHGHSIRYAISCGMKRYD FLRGNERYKYSFGVNERRLHCYVVATRSGRNLGGRLDVRAIADALKEATDLHQEGKIDQAARAYRQILETDPRNEGALHR YGQLLARRGDHVAAKRMFKLLTRMRTDTYKPWLLLGQSCEAMGQFLEAANAYREVIRLQPAVPDIFSKLVNVLFKAGRIE DARQALMTSYGVGSTGAEGGASFSIH
Sequences:
>Translated_506_residues MHIDLIEDMDTFSRLRENWDEVYDSDPYATLFLSWTWLLSWLEKLSTPWIVLAAKRSGSDAHYVAFFPLRIDTRIDGEGR LSNDLRMAGSHAADYCGLISIPDFESDAITAFAQQIKRLNWTDFVLGNFSGSDARFTKLVSCFSQSKFTISQMDRVNKTD QVDNALCPYVELPDDWDTYLETLSANTRQKLRRLLRVVDANSDYRITHATADTVATDLDTLLRFWEIKWRPRKGKLTDSL VRAHRAMLSRSFDRGLLFLPTLWAGDRPLAALAILVDERKKSFLFYITGRDEEFAGPQPGLILHGHSIRYAISCGMKRYD FLRGNERYKYSFGVNERRLHCYVVATRSGRNLGGRLDVRAIADALKEATDLHQEGKIDQAARAYRQILETDPRNEGALHR YGQLLARRGDHVAAKRMFKLLTRMRTDTYKPWLLLGQSCEAMGQFLEAANAYREVIRLQPAVPDIFSKLVNVLFKAGRIE DARQALMTSYGVGSTGAEGGASFSIH >Mature_506_residues MHIDLIEDMDTFSRLRENWDEVYDSDPYATLFLSWTWLLSWLEKLSTPWIVLAAKRSGSDAHYVAFFPLRIDTRIDGEGR LSNDLRMAGSHAADYCGLISIPDFESDAITAFAQQIKRLNWTDFVLGNFSGSDARFTKLVSCFSQSKFTISQMDRVNKTD QVDNALCPYVELPDDWDTYLETLSANTRQKLRRLLRVVDANSDYRITHATADTVATDLDTLLRFWEIKWRPRKGKLTDSL VRAHRAMLSRSFDRGLLFLPTLWAGDRPLAALAILVDERKKSFLFYITGRDEEFAGPQPGLILHGHSIRYAISCGMKRYD FLRGNERYKYSFGVNERRLHCYVVATRSGRNLGGRLDVRAIADALKEATDLHQEGKIDQAARAYRQILETDPRNEGALHR YGQLLARRGDHVAAKRMFKLLTRMRTDTYKPWLLLGQSCEAMGQFLEAANAYREVIRLQPAVPDIFSKLVNVLFKAGRIE DARQALMTSYGVGSTGAEGGASFSIH
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57681; Mature: 57681
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIDLIEDMDTFSRLRENWDEVYDSDPYATLFLSWTWLLSWLEKLSTPWIVLAAKRSGSD CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC AHYVAFFPLRIDTRIDGEGRLSNDLRMAGSHAADYCGLISIPDFESDAITAFAQQIKRLN CEEEEEEEEEEEEEECCCCCCCCHHHHCCCCHHHCCCEEECCCCCHHHHHHHHHHHHHCC WTDFVLGNFSGSDARFTKLVSCFSQSKFTISQMDRVNKTDQVDNALCPYVELPDDWDTYL CCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHH ETLSANTRQKLRRLLRVVDANSDYRITHATADTVATDLDTLLRFWEIKWRPRKGKLTDSL HHHCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCEECCCCCCHHHHH VRAHRAMLSRSFDRGLLFLPTLWAGDRPLAALAILVDERKKSFLFYITGRDEEFAGPQPG HHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC LILHGHSIRYAISCGMKRYDFLRGNERYKYSFGVNERRLHCYVVATRSGRNLGGRLDVRA EEEECCCEEEEECCCCHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHH IADALKEATDLHQEGKIDQAARAYRQILETDPRNEGALHRYGQLLARRGDHVAAKRMFKL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH LTRMRTDTYKPWLLLGQSCEAMGQFLEAANAYREVIRLQPAVPDIFSKLVNVLFKAGRIE HHHHHCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH DARQALMTSYGVGSTGAEGGASFSIH HHHHHHHHHCCCCCCCCCCCCEECCC >Mature Secondary Structure MHIDLIEDMDTFSRLRENWDEVYDSDPYATLFLSWTWLLSWLEKLSTPWIVLAAKRSGSD CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC AHYVAFFPLRIDTRIDGEGRLSNDLRMAGSHAADYCGLISIPDFESDAITAFAQQIKRLN CEEEEEEEEEEEEEECCCCCCCCHHHHCCCCHHHCCCEEECCCCCHHHHHHHHHHHHHCC WTDFVLGNFSGSDARFTKLVSCFSQSKFTISQMDRVNKTDQVDNALCPYVELPDDWDTYL CCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHH ETLSANTRQKLRRLLRVVDANSDYRITHATADTVATDLDTLLRFWEIKWRPRKGKLTDSL HHHCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCEECCCCCCHHHHH VRAHRAMLSRSFDRGLLFLPTLWAGDRPLAALAILVDERKKSFLFYITGRDEEFAGPQPG HHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC LILHGHSIRYAISCGMKRYDFLRGNERYKYSFGVNERRLHCYVVATRSGRNLGGRLDVRA EEEECCCEEEEECCCCHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHH IADALKEATDLHQEGKIDQAARAYRQILETDPRNEGALHRYGQLLARRGDHVAAKRMFKL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH LTRMRTDTYKPWLLLGQSCEAMGQFLEAANAYREVIRLQPAVPDIFSKLVNVLFKAGRIE HHHHHCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH DARQALMTSYGVGSTGAEGGASFSIH HHHHHHHHHCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA