| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is ntaB [H]
Identifier: 75675131
GI number: 75675131
Start: 1028083
End: 1028625
Strand: Direct
Name: ntaB [H]
Synonym: Nwi_0938
Alternate gene names: 75675131
Gene position: 1028083-1028625 (Clockwise)
Preceding gene: 75675130
Following gene: 75675132
Centisome position: 30.22
GC content: 61.69
Gene sequence:
>543_bases ATGACTGACGGTTCTGAACTTCCCGACACGCCGGATCCGGCTCGTGAACTGGCGAGCGGGGAGTCGACTCTCGATCCGCG CGACTTCCGCAATGCGCTCGGAACCTATGCGACGGGCGTCACCATCATCACGGCTGTCGACGAGGAAGGAACGCCGCACG GGTTAACGTGCAACTCGTTCGCGTCGGTCTCGCTGAATCCGCCGCTGGTGCTGTGGAGCCTCGTGATCTATTCGCGGAAC ATGAGCGTCTTTCAAAACGCCAGCCATTTCGCCGTCAATGTGCTCGGGGCTTCACAACAAGGGCTCGCGACCAAATTCGC GCAGCCGTCGAGCCGGAAGTTCGAGGGGGTCGGCTGGAAACCGGGTCTCGGCGGCGCTCCGCTTCTGGCGGGCAGCGTTG CGAGCTTTGAATGTCGAGCCGTCGATCGTTATTACGGCGGAGATCACGTCATCTTCCTCGGCGCCGTGGAAGCCTATAGC TACAACCGGGACGAGGCGCTGTTGTTTTCCCGCGGCAAGTATGGCCGCTTCGTCGGCGAATGA
Upstream 100 bases:
>100_bases TCAACTCCCATATCGCATTCAGCTTCGATGCTGCGGGCACGGATTACGGCCGGGTCGCCCTCGGGCTGCCGTCGCAGAAT CTGACGTTGTGAGGCGTCTG
Downstream 100 bases:
>100_bases CGGCCTGCTGGCCCTGATGCGCAAGCAGCCTGAATTCCGGCGATGTCTCGCAAGCCGGCATGTCGGATGCCCTTGCCGCG GCGCTTCCAGCCCGACTTTC
Product: flavin reductase-like, FMN-binding
Products: NAD(+); reduced flavin [C]
Alternate protein names: NTA monooxygenase component B; NTA-MO B [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTDGSELPDTPDPARELASGESTLDPRDFRNALGTYATGVTIITAVDEEGTPHGLTCNSFASVSLNPPLVLWSLVIYSRN MSVFQNASHFAVNVLGASQQGLATKFAQPSSRKFEGVGWKPGLGGAPLLAGSVASFECRAVDRYYGGDHVIFLGAVEAYS YNRDEALLFSRGKYGRFVGE
Sequences:
>Translated_180_residues MTDGSELPDTPDPARELASGESTLDPRDFRNALGTYATGVTIITAVDEEGTPHGLTCNSFASVSLNPPLVLWSLVIYSRN MSVFQNASHFAVNVLGASQQGLATKFAQPSSRKFEGVGWKPGLGGAPLLAGSVASFECRAVDRYYGGDHVIFLGAVEAYS YNRDEALLFSRGKYGRFVGE >Mature_179_residues TDGSELPDTPDPARELASGESTLDPRDFRNALGTYATGVTIITAVDEEGTPHGLTCNSFASVSLNPPLVLWSLVIYSRNM SVFQNASHFAVNVLGASQQGLATKFAQPSSRKFEGVGWKPGLGGAPLLAGSVASFECRAVDRYYGGDHVIFLGAVEAYSY NRDEALLFSRGKYGRFVGE
Specific function: Hydroxylation of nitrilotriacetate [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081819, Length=140, Percent_Identity=32.1428571428571, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011991 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 19245; Mature: 19113
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGSELPDTPDPARELASGESTLDPRDFRNALGTYATGVTIITAVDEEGTPHGLTCNSF CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEECCCE ASVSLNPPLVLWSLVIYSRNMSVFQNASHFAVNVLGASQQGLATKFAQPSSRKFEGVGWK EEECCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCC PGLGGAPLLAGSVASFECRAVDRYYGGDHVIFLGAVEAYSYNRDEALLFSRGKYGRFVGE CCCCCCCEEECCCCCEEEEEEHHEECCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure TDGSELPDTPDPARELASGESTLDPRDFRNALGTYATGVTIITAVDEEGTPHGLTCNSF CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEECCCE ASVSLNPPLVLWSLVIYSRNMSVFQNASHFAVNVLGASQQGLATKFAQPSSRKFEGVGWK EEECCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCC PGLGGAPLLAGSVASFECRAVDRYYGGDHVIFLGAVEAYSYNRDEALLFSRGKYGRFVGE CCCCCCCEEECCCCCEEEEEEHHEECCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892809; 9023192; 1735711 [H]