Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75674934

Identifier: 75674934

GI number: 75674934

Start: 824553

End: 826181

Strand: Direct

Name: 75674934

Synonym: Nwi_0737

Alternate gene names: NA

Gene position: 824553-826181 (Clockwise)

Preceding gene: 75674932

Following gene: 75674935

Centisome position: 24.24

GC content: 60.22

Gene sequence:

>1629_bases
ATGAAAGCCACCACGTCCCAGAAGGCCGTCATCTATTGTCGCGTGTCCAGTAAGAAGCAAGTCCGTGAAGGTGACGGCCT
GCGCAGCCAGGAAACCCGCTGCCGCGAATATGCGGCCTATAAAGGCTATGAGATCGTCGGTGTTTTCTGCGACAGCGTGA
CCGGCAGCAAGAAGAAGCGCCTGGGGCTCTCCGCCGTGGTGAAACACCTCAAGGCGCACCGCAAGGATGGTTGCGTCGTC
ATCATCGACCACATCGACCGCTTTGCCCGTGACGTGCGCTGGCATTGGGACTTGCGCGATCTGCTACGCGAGGCGGGCGG
GAAGCTGGAAAGCCCTTCCATCGAGTTCGGCGAGGATGCGGATAGCATCCTGCGTGAGAACCTGCTGGCCTCGGTTTCGC
AGCATCAGCGCCAGAAGAATGCAGAGCAGACCCGCAACCGCATGCGCGCACGGGCGATGAATGGCTATTGGGTGTTTCAG
GCTCCGATGGGCTACCGCTACGAGCGCGTTGCCGGACACGGCAAGATGCTGGTGCCGCAAGAACCATTGGCGTCGATCAT
CGGGGAGGCTCTCGAAGGCTACGCCTCGGGCCGCTTCGAGGGATTGACGGAAGTGAAGCGATTTCTGGAATCCCAGCCCG
CGTTCCCGCGCAACAGTAATGACGAGGTTCACATCGAGCGAATCTCGGAGATTTTCTCGCGCCCGGTCTACGCAGGTCAT
ATCACCATCGAGGACTGGGGCCTTCGGTTGGTTCCCGGCAAGCATAAGCAGCTGGTCAGTCTCGCCACATGGCAGGCTGT
GCAGGATCGGCGTTCCGGCACGGCAAAGGCTCCGGCGCGGGCCGATATCAGCGAAGACTTCCCGCTGCGCGGCTTCGTCT
CCTGCGGCTGCTGCGGCAAGCCGCTGACCGCTTGCTGGTCGAAGGGCCGCAGCGCCCGCTATCCCTACTATCTCTGCGAT
ACGCGGGGCTGCCCGGAATCACGCAAGTCGATCCGCCGCGACGCGATCGAGGGCGAGTTCGAGACGCTGCTGACCTCGCT
CAAACCGACTGAGGGATTGTTCAATGTCGCCTTCGCGATGTTCCGCGATCTCTGGGAAGCGAAGCTCGCGAGCCAGCATT
CTCAGGGCGGTACGCTTAAGAAGGAAATCGCCCTGATCGAGCGCAAGGTCGATGCGTTGCTAGACCGGATCGTGGACGCG
GACAGTGATTCCATCGTCAGAGCCTATGAGAAGCGCATCCGTGATCTCGAAACGCAGAAGGCTCTGATGCGGGATCGTAT
CGCGAATTGCGGTAGGCCGCTCACCAGCTTTTCCGAAGCTTATCGAACCGCCTTCGACTTTCTCGCAAACCCTTGCAAAC
TCTGGCACTCGGAGAAGATCGAGGATCGCCGCGCCGTGCTCAAGCTGGCCTTCGCCGAGCGTCTGATCTACGTGCGCGGG
GAGGGTTATCGAACCGCCCAATTCTCCATGCCATTCAAACTCATAGGAGGTGCTGAAATGAATGAAAAAGAGATGGTGCC
CCTGGCCGGAATCGAACCAGCACTCCTTGCGGAACTCGATTTTGAGTCGAGCGCGTCTACCAGTTCCGCCACAGGGGCAT
TCGCGAGTCACATCCGAATGCGGCCATGA

Upstream 100 bases:

>100_bases
GGTACCCTTGGAGGATCACAACAGCACAGAAGACAAAGCCCAGACGGATGCGTTCACGCAACGCGCAGACAGGGCAACGC
GAAAGGAGAACGTCTGATTC

Downstream 100 bases:

>100_bases
CCTTACGAAGCGGAGCGGACTATAGCGGCCGATCCTTGCCGGTCAACCCGGCCGCGCTAGGTGTGATGTTGCGTCAGGGG
GGGCTTGGTCCGAAGGACCG

Product: resolvase

Products: NA

Alternate protein names: Site-Specific Recombinase; Resolvase Domain Protein; Resolvase; Recombinase; Resolvase Domain; Cassette Chromosome Recombinase B; Site-Specific DNA Recombinase; Resolvase Family Site-Specific Recombinase; Site-Specific Recombinase Resolvase Family; DNA Recombinase; Bacteriophage Resolvase/Recombinase; Site-Specific Recombinase For Integration And Excision; Site-Specific Recombinases; Site-Specific Recombinase Resolvase Domain Protein; Resolvase-Like Protein; Prophage Integrase; LOW QUALITY PROTEIN Resolvase Domain Protein; Site-Specific Integrase; DNA Integration/Recombination/Invertion Protein; Resolvase N Terminal Domain Family; Serine Type Site-Specific Recombinase

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKRLGLSAVVKHLKAHRKDGCVV
IIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDADSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQ
APMGYRYERVAGHGKMLVPQEPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH
ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGKPLTACWSKGRSARYPYYLCD
TRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAMFRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDA
DSDSIVRAYEKRIRDLETQKALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG
EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRMRP

Sequences:

>Translated_542_residues
MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKRLGLSAVVKHLKAHRKDGCVV
IIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDADSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQ
APMGYRYERVAGHGKMLVPQEPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH
ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGKPLTACWSKGRSARYPYYLCD
TRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAMFRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDA
DSDSIVRAYEKRIRDLETQKALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG
EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRMRP
>Mature_542_residues
MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKRLGLSAVVKHLKAHRKDGCVV
IIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDADSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQ
APMGYRYERVAGHGKMLVPQEPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH
ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGKPLTACWSKGRSARYPYYLCD
TRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAMFRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDA
DSDSIVRAYEKRIRDLETQKALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG
EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRMRP

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61176; Mature: 61176

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKR
CCCCCCCCEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHH
LGLSAVVKHLKAHRKDGCVVIIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDA
CCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCH
DSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQAPMGYRYERVAGHGKMLVPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCEECCC
EPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGK
EEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLTACWSKGRSARYPYYLCDTRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAM
HHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHH
FRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDADSDSIVRAYEKRIRDLETQK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRM
CCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCC
RP
CC
>Mature Secondary Structure
MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKR
CCCCCCCCEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHH
LGLSAVVKHLKAHRKDGCVVIIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDA
CCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCH
DSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQAPMGYRYERVAGHGKMLVPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCEECCC
EPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGK
EEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLTACWSKGRSARYPYYLCDTRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAM
HHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHH
FRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDADSDSIVRAYEKRIRDLETQK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRM
CCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCC
RP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA