| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674934
Identifier: 75674934
GI number: 75674934
Start: 824553
End: 826181
Strand: Direct
Name: 75674934
Synonym: Nwi_0737
Alternate gene names: NA
Gene position: 824553-826181 (Clockwise)
Preceding gene: 75674932
Following gene: 75674935
Centisome position: 24.24
GC content: 60.22
Gene sequence:
>1629_bases ATGAAAGCCACCACGTCCCAGAAGGCCGTCATCTATTGTCGCGTGTCCAGTAAGAAGCAAGTCCGTGAAGGTGACGGCCT GCGCAGCCAGGAAACCCGCTGCCGCGAATATGCGGCCTATAAAGGCTATGAGATCGTCGGTGTTTTCTGCGACAGCGTGA CCGGCAGCAAGAAGAAGCGCCTGGGGCTCTCCGCCGTGGTGAAACACCTCAAGGCGCACCGCAAGGATGGTTGCGTCGTC ATCATCGACCACATCGACCGCTTTGCCCGTGACGTGCGCTGGCATTGGGACTTGCGCGATCTGCTACGCGAGGCGGGCGG GAAGCTGGAAAGCCCTTCCATCGAGTTCGGCGAGGATGCGGATAGCATCCTGCGTGAGAACCTGCTGGCCTCGGTTTCGC AGCATCAGCGCCAGAAGAATGCAGAGCAGACCCGCAACCGCATGCGCGCACGGGCGATGAATGGCTATTGGGTGTTTCAG GCTCCGATGGGCTACCGCTACGAGCGCGTTGCCGGACACGGCAAGATGCTGGTGCCGCAAGAACCATTGGCGTCGATCAT CGGGGAGGCTCTCGAAGGCTACGCCTCGGGCCGCTTCGAGGGATTGACGGAAGTGAAGCGATTTCTGGAATCCCAGCCCG CGTTCCCGCGCAACAGTAATGACGAGGTTCACATCGAGCGAATCTCGGAGATTTTCTCGCGCCCGGTCTACGCAGGTCAT ATCACCATCGAGGACTGGGGCCTTCGGTTGGTTCCCGGCAAGCATAAGCAGCTGGTCAGTCTCGCCACATGGCAGGCTGT GCAGGATCGGCGTTCCGGCACGGCAAAGGCTCCGGCGCGGGCCGATATCAGCGAAGACTTCCCGCTGCGCGGCTTCGTCT CCTGCGGCTGCTGCGGCAAGCCGCTGACCGCTTGCTGGTCGAAGGGCCGCAGCGCCCGCTATCCCTACTATCTCTGCGAT ACGCGGGGCTGCCCGGAATCACGCAAGTCGATCCGCCGCGACGCGATCGAGGGCGAGTTCGAGACGCTGCTGACCTCGCT CAAACCGACTGAGGGATTGTTCAATGTCGCCTTCGCGATGTTCCGCGATCTCTGGGAAGCGAAGCTCGCGAGCCAGCATT CTCAGGGCGGTACGCTTAAGAAGGAAATCGCCCTGATCGAGCGCAAGGTCGATGCGTTGCTAGACCGGATCGTGGACGCG GACAGTGATTCCATCGTCAGAGCCTATGAGAAGCGCATCCGTGATCTCGAAACGCAGAAGGCTCTGATGCGGGATCGTAT CGCGAATTGCGGTAGGCCGCTCACCAGCTTTTCCGAAGCTTATCGAACCGCCTTCGACTTTCTCGCAAACCCTTGCAAAC TCTGGCACTCGGAGAAGATCGAGGATCGCCGCGCCGTGCTCAAGCTGGCCTTCGCCGAGCGTCTGATCTACGTGCGCGGG GAGGGTTATCGAACCGCCCAATTCTCCATGCCATTCAAACTCATAGGAGGTGCTGAAATGAATGAAAAAGAGATGGTGCC CCTGGCCGGAATCGAACCAGCACTCCTTGCGGAACTCGATTTTGAGTCGAGCGCGTCTACCAGTTCCGCCACAGGGGCAT TCGCGAGTCACATCCGAATGCGGCCATGA
Upstream 100 bases:
>100_bases GGTACCCTTGGAGGATCACAACAGCACAGAAGACAAAGCCCAGACGGATGCGTTCACGCAACGCGCAGACAGGGCAACGC GAAAGGAGAACGTCTGATTC
Downstream 100 bases:
>100_bases CCTTACGAAGCGGAGCGGACTATAGCGGCCGATCCTTGCCGGTCAACCCGGCCGCGCTAGGTGTGATGTTGCGTCAGGGG GGGCTTGGTCCGAAGGACCG
Product: resolvase
Products: NA
Alternate protein names: Site-Specific Recombinase; Resolvase Domain Protein; Resolvase; Recombinase; Resolvase Domain; Cassette Chromosome Recombinase B; Site-Specific DNA Recombinase; Resolvase Family Site-Specific Recombinase; Site-Specific Recombinase Resolvase Family; DNA Recombinase; Bacteriophage Resolvase/Recombinase; Site-Specific Recombinase For Integration And Excision; Site-Specific Recombinases; Site-Specific Recombinase Resolvase Domain Protein; Resolvase-Like Protein; Prophage Integrase; LOW QUALITY PROTEIN Resolvase Domain Protein; Site-Specific Integrase; DNA Integration/Recombination/Invertion Protein; Resolvase N Terminal Domain Family; Serine Type Site-Specific Recombinase
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKRLGLSAVVKHLKAHRKDGCVV IIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDADSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQ APMGYRYERVAGHGKMLVPQEPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGKPLTACWSKGRSARYPYYLCD TRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAMFRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDA DSDSIVRAYEKRIRDLETQKALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRMRP
Sequences:
>Translated_542_residues MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKRLGLSAVVKHLKAHRKDGCVV IIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDADSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQ APMGYRYERVAGHGKMLVPQEPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGKPLTACWSKGRSARYPYYLCD TRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAMFRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDA DSDSIVRAYEKRIRDLETQKALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRMRP >Mature_542_residues MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKRLGLSAVVKHLKAHRKDGCVV IIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDADSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQ APMGYRYERVAGHGKMLVPQEPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGKPLTACWSKGRSARYPYYLCD TRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAMFRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDA DSDSIVRAYEKRIRDLETQKALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRMRP
Specific function: Unknown
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61176; Mature: 61176
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00397 RECOMBINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKR CCCCCCCCEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHH LGLSAVVKHLKAHRKDGCVVIIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDA CCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCH DSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQAPMGYRYERVAGHGKMLVPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCEECCC EPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGK EEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLTACWSKGRSARYPYYLCDTRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAM HHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHH FRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDADSDSIVRAYEKRIRDLETQK HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRM CCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCC RP CC >Mature Secondary Structure MKATTSQKAVIYCRVSSKKQVREGDGLRSQETRCREYAAYKGYEIVGVFCDSVTGSKKKR CCCCCCCCEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHH LGLSAVVKHLKAHRKDGCVVIIDHIDRFARDVRWHWDLRDLLREAGGKLESPSIEFGEDA CCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCH DSILRENLLASVSQHQRQKNAEQTRNRMRARAMNGYWVFQAPMGYRYERVAGHGKMLVPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCEECCC EPLASIIGEALEGYASGRFEGLTEVKRFLESQPAFPRNSNDEVHIERISEIFSRPVYAGH CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE ITIEDWGLRLVPGKHKQLVSLATWQAVQDRRSGTAKAPARADISEDFPLRGFVSCGCCGK EEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLTACWSKGRSARYPYYLCDTRGCPESRKSIRRDAIEGEFETLLTSLKPTEGLFNVAFAM HHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHH FRDLWEAKLASQHSQGGTLKKEIALIERKVDALLDRIVDADSDSIVRAYEKRIRDLETQK HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ALMRDRIANCGRPLTSFSEAYRTAFDFLANPCKLWHSEKIEDRRAVLKLAFAERLIYVRG HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC EGYRTAQFSMPFKLIGGAEMNEKEMVPLAGIEPALLAELDFESSASTSSATGAFASHIRM CCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCC RP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA