| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674925
Identifier: 75674925
GI number: 75674925
Start: 814287
End: 815561
Strand: Direct
Name: 75674925
Synonym: Nwi_0728
Alternate gene names: NA
Gene position: 814287-815561 (Clockwise)
Preceding gene: 75674924
Following gene: 75674926
Centisome position: 23.93
GC content: 62.75
Gene sequence:
>1275_bases ATGATCCTGAAAGCCTCGCAGCGCGGCAGCGGCCAGAACCTCGCCGCCCATCTGATGCGCACCGATGATAACGAGCATGT GCTCGTCCATGATCTGCGCGGCTTTGCCTCGGACGATCTGCATGGTGCGTTCAAGGAAGCGGAAGCCGTCAGCCATGGCA CGAAATGCCGCCAGTATCTGTTCTCGCTCAGCCTGAATCCGCCGGAAGCGGAAAACGTCCCCATCACCGTCTTCGAGGAC GCCATCGAGCGGATCGAAGGAAAGCTCAAGCTTGAAGGCCAGCCGCGCGCCATCGTCTTCCATGAGAAGGAAGGCAGGCG TCACGCCCATTGCGTGTGGTCGCGCATCGACGCCGAAACGATGACGGCGCGCCAGATGTCGTTCTTCAAGCAAAAGCTGA TGGGCGTCTCGCGAGACCTCTATCTGGAAAACGGATGGAAAATGCCGCGTGGGCTGGAAAACGCGGCGGAACGCAATCCC ACGAACTTCAGCCTTGCAGAATGGCAGCAGGCCAAACGGCAGGATATCGATCCGCGCTGGCTCAAGACGACGCTGCAACA TTGCTGGGCGCGCTCCGATAACGAACGGTCATTCGTGCGCAGCCTCGAAGAGCATGGCTTCTTTCTCGCGCGCGGCGACC GGCGGAGCTTCGTCGTCCTCGACCATAATGGCGAGGTCTGGTCGCTGGCACGCTGCCTCGACCTGAAGAGCAAAGAGGTT GCGGCACGCCTCGGCGATGCCGCCGCCTTGCCGAGCGTCGAGGTCGCAAAGGCATCGGTCGGCGCGCGCATGACCCCCGC CCTCCGCCGCCACGTCGAAGAATCCAGGGCGCGGTTTCAGAAGCGATCCGCCACGCTCGGCCAGCGCAGGATGGAGATGA CGCACCGCCAGCGGGCCGAGCGCGCGCAGCTCAAGGCAACGCAGGAAACCGAATGGCAACGGGAAACCCGTGCGCGAGCG GAGCGCCTTCCCAAAGGGCTGCGCGGCCTCTGGCATCGGATAACGGGAAAATACCAGCAAGTCCGGTCTGAGAATGAGCG GGAGGCGCAACGCACGCAGGAGCGACATACGGGTGAGCGTCAGACCCTGATCGACCGCCAGCGCGATGAGCGCTCTCTAT TGCAAAAACAGTTCAGGGAATTGCGGTCACAGCAGGCCGCGCTTCTTCTCGAATTACGCAAAGACATCGGGCGCTACCTG CGCATGGCGCGCGCCCGTGCGGACAGTGCCGCGCTTTCCAGACGCAGAGGCTCCAGCCTCAGACTCCAACGGTAA
Upstream 100 bases:
>100_bases CGCCGGAAACCGAAGCCGATCTGCGGGCCGCGCTCGCCGATGTCCGGGAATTGCGCCGCCTGCTGCTGACCGCCCTGGGA TTCAGGCCGGAGGGGCGGTC
Downstream 100 bases:
>100_bases AAAGGAGATCGCCCATGTCTTCGAAGAACAACGACGAGATGACCGGAATCGTCATGGTGTTCGCGCTGATCGGCGGGATG GTTTATGCCGCCATCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Relaxase/Mobilization Nuclease Domain Protein; Relaxase/Mobilization Nuclease Domain-Containing Protein; Ti-Type Conjugative Transfer Relaxase TraA; MobA/MobL Protein
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MILKASQRGSGQNLAAHLMRTDDNEHVLVHDLRGFASDDLHGAFKEAEAVSHGTKCRQYLFSLSLNPPEAENVPITVFED AIERIEGKLKLEGQPRAIVFHEKEGRRHAHCVWSRIDAETMTARQMSFFKQKLMGVSRDLYLENGWKMPRGLENAAERNP TNFSLAEWQQAKRQDIDPRWLKTTLQHCWARSDNERSFVRSLEEHGFFLARGDRRSFVVLDHNGEVWSLARCLDLKSKEV AARLGDAAALPSVEVAKASVGARMTPALRRHVEESRARFQKRSATLGQRRMEMTHRQRAERAQLKATQETEWQRETRARA ERLPKGLRGLWHRITGKYQQVRSENEREAQRTQERHTGERQTLIDRQRDERSLLQKQFRELRSQQAALLLELRKDIGRYL RMARARADSAALSRRRGSSLRLQR
Sequences:
>Translated_424_residues MILKASQRGSGQNLAAHLMRTDDNEHVLVHDLRGFASDDLHGAFKEAEAVSHGTKCRQYLFSLSLNPPEAENVPITVFED AIERIEGKLKLEGQPRAIVFHEKEGRRHAHCVWSRIDAETMTARQMSFFKQKLMGVSRDLYLENGWKMPRGLENAAERNP TNFSLAEWQQAKRQDIDPRWLKTTLQHCWARSDNERSFVRSLEEHGFFLARGDRRSFVVLDHNGEVWSLARCLDLKSKEV AARLGDAAALPSVEVAKASVGARMTPALRRHVEESRARFQKRSATLGQRRMEMTHRQRAERAQLKATQETEWQRETRARA ERLPKGLRGLWHRITGKYQQVRSENEREAQRTQERHTGERQTLIDRQRDERSLLQKQFRELRSQQAALLLELRKDIGRYL RMARARADSAALSRRRGSSLRLQR >Mature_424_residues MILKASQRGSGQNLAAHLMRTDDNEHVLVHDLRGFASDDLHGAFKEAEAVSHGTKCRQYLFSLSLNPPEAENVPITVFED AIERIEGKLKLEGQPRAIVFHEKEGRRHAHCVWSRIDAETMTARQMSFFKQKLMGVSRDLYLENGWKMPRGLENAAERNP TNFSLAEWQQAKRQDIDPRWLKTTLQHCWARSDNERSFVRSLEEHGFFLARGDRRSFVVLDHNGEVWSLARCLDLKSKEV AARLGDAAALPSVEVAKASVGARMTPALRRHVEESRARFQKRSATLGQRRMEMTHRQRAERAQLKATQETEWQRETRARA ERLPKGLRGLWHRITGKYQQVRSENEREAQRTQERHTGERQTLIDRQRDERSLLQKQFRELRSQQAALLLELRKDIGRYL RMARARADSAALSRRRGSSLRLQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49223; Mature: 49223
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKASQRGSGQNLAAHLMRTDDNEHVLVHDLRGFASDDLHGAFKEAEAVSHGTKCRQYL CCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FSLSLNPPEAENVPITVFEDAIERIEGKLKLEGQPRAIVFHEKEGRRHAHCVWSRIDAET HHHCCCCCCCCCCCEEHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHH MTARQMSFFKQKLMGVSRDLYLENGWKMPRGLENAAERNPTNFSLAEWQQAKRQDIDPRW HHHHHHHHHHHHHHCCCHHHEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHH LKTTLQHCWARSDNERSFVRSLEEHGFFLARGDRRSFVVLDHNGEVWSLARCLDLKSKEV HHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHH AARLGDAAALPSVEVAKASVGARMTPALRRHVEESRARFQKRSATLGQRRMEMTHRQRAE HHHHCCHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQLKATQETEWQRETRARAERLPKGLRGLWHRITGKYQQVRSENEREAQRTQERHTGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH QTLIDRQRDERSLLQKQFRELRSQQAALLLELRKDIGRYLRMARARADSAALSRRRGSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLQR CCCC >Mature Secondary Structure MILKASQRGSGQNLAAHLMRTDDNEHVLVHDLRGFASDDLHGAFKEAEAVSHGTKCRQYL CCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FSLSLNPPEAENVPITVFEDAIERIEGKLKLEGQPRAIVFHEKEGRRHAHCVWSRIDAET HHHCCCCCCCCCCCEEHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHH MTARQMSFFKQKLMGVSRDLYLENGWKMPRGLENAAERNPTNFSLAEWQQAKRQDIDPRW HHHHHHHHHHHHHHCCCHHHEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHH LKTTLQHCWARSDNERSFVRSLEEHGFFLARGDRRSFVVLDHNGEVWSLARCLDLKSKEV HHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHH AARLGDAAALPSVEVAKASVGARMTPALRRHVEESRARFQKRSATLGQRRMEMTHRQRAE HHHHCCHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQLKATQETEWQRETRARAERLPKGLRGLWHRITGKYQQVRSENEREAQRTQERHTGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH QTLIDRQRDERSLLQKQFRELRSQQAALLLELRKDIGRYLRMARARADSAALSRRRGSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLQR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA