| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674891
Identifier: 75674891
GI number: 75674891
Start: 773194
End: 774594
Strand: Direct
Name: 75674891
Synonym: Nwi_0694
Alternate gene names: NA
Gene position: 773194-774594 (Clockwise)
Preceding gene: 75674885
Following gene: 75674892
Centisome position: 22.73
GC content: 59.31
Gene sequence:
>1401_bases ATGCCCATGAAAACCGCAATCGGACTGACCACAGTGATCGCCGCCGCTTTGGCTTCTGCATTTGCCGCCACCTCCGATCC ATTGCCGCCCGAATCGACCTATCGCCCCTTGCCGACCCAGCCTTTCTCAAAGGTGAAGGAGGACGACGAGGCGCAGAAGC CGGCGGTGATGGAGCGGCAGCGAACGCTGATGGAGCAGCGATACGATCTGGCGAACCGGCCTGTCGCGGGCGTCATGATG TCAGGCGGCCGAAAGGCGGTTCAGCAGGGCGTGCGGGTCAAGCTTCCCCAAGGCGTTACATGGGACAGCCTTGCGGCAAA GGAACCGAACGAGATTCGAGACAAGGATCTGCTGCCGAAGGGATTTATGCCGCTGCCTCACGTAAAGCAGGCCACCGGGG GGCAGGTCTTCCCGGACGATCAGATTCGCAAGATTGCCCATGACGAACAGCGCGACCTTAAGCGCTTCGACATTGATTTC GACCTGCCCGGCCACCTGACGCCGGAGTTCCCGCCGCCGATCTTTCTCACGACGCATCCGGAACTCGGCGACGTATCGCG CGGCGATCTTTTGACGATCAGGAATTTCTACGAGTATCTGAACGGCATCATTACGCCGGTTCAGATGGAAGGTCTTCGCC TGCTGCTCACGCCTTTTCCGCAGGAAGAGTTCAACCAGACCGAAGATCGGAAAGTCGCGCAGCCGAGCCTTGGCGTCACC TGCCTGGATTGTCACGCGAACTTCCACACCAACGCTGCGTTTCACCTGACTCCGGATATCCGCCCGCAGGCGGAACGTTT CCGGCTCGATACCACCAGCCTGCGCGGCATGTACAACCAGCAGATCCACGGCTCGAAGCGATCGCTTCGTTCGATTGAGG ATTTCACCCAGTTTGAACAGCACACCGCATACTTCAACGGCGATCACGTCAGCGCGGCGCGAAAAGGCATGCATCTGCCG GATCGCGCCAATCAGGTCGCGATGATGGCGCAGATGCAGAACATCATCGATTTTCCGCCCGCCCCGAAGCTCGATCCCTC GGGGCGTCTTGATCCGAAGAAAGCCACCGAACAGGAGTTGCGGGGCGAGCAGGTGTTCCTGGGAAAAGGCCGCTGCGCTG AATGCCACATCCCGGCAATGTCCTTCACGGACAACAACATGCACGATCTGAAGCTCGAACGCTTCTACAAGGCCGGCCAG ACCATCAATGGCATGGTCGCCATCCCCGATGGCCCGATCAAGACCTTCACATTGCGCGGCATCAAGGATTCTCCGCCCTA TCTTCATGACGGCCGCCTTTTGACGCTTGCCGACACCGTGGAGTTTTTCAACCTCGTCCTGGGCACCAAACTGAACCAGC AGGACAAGGATGCGCTGGTGGCTTACCTCCTCACCCTTTGA
Upstream 100 bases:
>100_bases TTCCGCCTCCAGCCATCAACTCCGCAACCGGGCGGCGTTCCCGTTGCAACCAAGTACTGCATCGCGAGTTGTGAGGTTTC AAACTTCTCGGGAAACGGCC
Downstream 100 bases:
>100_bases GGGTCGTCAATCAGACGAAGGTTATGCGGAAAGTGTTGCTGGTGAGAGGCGCTGTGCTCACACCGCCGCGCCTGAGCGCA GAAGGCCGATGGCGGCGAGG
Product: cytochrome c Hsc
Products: NA
Alternate protein names: Cytochrome C Hsc; Cytochrome C; Cytochrome C Peroxidase-Like Protein; Cytochrome C Catalase CCC; Cytochrome
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MPMKTAIGLTTVIAAALASAFAATSDPLPPESTYRPLPTQPFSKVKEDDEAQKPAVMERQRTLMEQRYDLANRPVAGVMM SGGRKAVQQGVRVKLPQGVTWDSLAAKEPNEIRDKDLLPKGFMPLPHVKQATGGQVFPDDQIRKIAHDEQRDLKRFDIDF DLPGHLTPEFPPPIFLTTHPELGDVSRGDLLTIRNFYEYLNGIITPVQMEGLRLLLTPFPQEEFNQTEDRKVAQPSLGVT CLDCHANFHTNAAFHLTPDIRPQAERFRLDTTSLRGMYNQQIHGSKRSLRSIEDFTQFEQHTAYFNGDHVSAARKGMHLP DRANQVAMMAQMQNIIDFPPAPKLDPSGRLDPKKATEQELRGEQVFLGKGRCAECHIPAMSFTDNNMHDLKLERFYKAGQ TINGMVAIPDGPIKTFTLRGIKDSPPYLHDGRLLTLADTVEFFNLVLGTKLNQQDKDALVAYLLTL
Sequences:
>Translated_466_residues MPMKTAIGLTTVIAAALASAFAATSDPLPPESTYRPLPTQPFSKVKEDDEAQKPAVMERQRTLMEQRYDLANRPVAGVMM SGGRKAVQQGVRVKLPQGVTWDSLAAKEPNEIRDKDLLPKGFMPLPHVKQATGGQVFPDDQIRKIAHDEQRDLKRFDIDF DLPGHLTPEFPPPIFLTTHPELGDVSRGDLLTIRNFYEYLNGIITPVQMEGLRLLLTPFPQEEFNQTEDRKVAQPSLGVT CLDCHANFHTNAAFHLTPDIRPQAERFRLDTTSLRGMYNQQIHGSKRSLRSIEDFTQFEQHTAYFNGDHVSAARKGMHLP DRANQVAMMAQMQNIIDFPPAPKLDPSGRLDPKKATEQELRGEQVFLGKGRCAECHIPAMSFTDNNMHDLKLERFYKAGQ TINGMVAIPDGPIKTFTLRGIKDSPPYLHDGRLLTLADTVEFFNLVLGTKLNQQDKDALVAYLLTL >Mature_465_residues PMKTAIGLTTVIAAALASAFAATSDPLPPESTYRPLPTQPFSKVKEDDEAQKPAVMERQRTLMEQRYDLANRPVAGVMMS GGRKAVQQGVRVKLPQGVTWDSLAAKEPNEIRDKDLLPKGFMPLPHVKQATGGQVFPDDQIRKIAHDEQRDLKRFDIDFD LPGHLTPEFPPPIFLTTHPELGDVSRGDLLTIRNFYEYLNGIITPVQMEGLRLLLTPFPQEEFNQTEDRKVAQPSLGVTC LDCHANFHTNAAFHLTPDIRPQAERFRLDTTSLRGMYNQQIHGSKRSLRSIEDFTQFEQHTAYFNGDHVSAARKGMHLPD RANQVAMMAQMQNIIDFPPAPKLDPSGRLDPKKATEQELRGEQVFLGKGRCAECHIPAMSFTDNNMHDLKLERFYKAGQT INGMVAIPDGPIKTFTLRGIKDSPPYLHDGRLLTLADTVEFFNLVLGTKLNQQDKDALVAYLLTL
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52275; Mature: 52144
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKTAIGLTTVIAAALASAFAATSDPLPPESTYRPLPTQPFSKVKEDDEAQKPAVMERQ CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHHH RTLMEQRYDLANRPVAGVMMSGGRKAVQQGVRVKLPQGVTWDSLAAKEPNEIRDKDLLPK HHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEECCCCCCHHHHCCCCCHHHHHHCCCCC GFMPLPHVKQATGGQVFPDDQIRKIAHDEQRDLKRFDIDFDLPGHLTPEFPPPIFLTTHP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC ELGDVSRGDLLTIRNFYEYLNGIITPVQMEGLRLLLTPFPQEEFNQTEDRKVAQPSLGVT CCCCCCCCCEEHHHHHHHHHHHCCCCEECCCEEEEECCCCHHHHCCCHHHHHCCCCCCEE CLDCHANFHTNAAFHLTPDIRPQAERFRLDTTSLRGMYNQQIHGSKRSLRSIEDFTQFEQ EEEECCCCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HTAYFNGDHVSAARKGMHLPDRANQVAMMAQMQNIIDFPPAPKLDPSGRLDPKKATEQEL HHCEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH RGEQVFLGKGRCAECHIPAMSFTDNNMHDLKLERFYKAGQTINGMVAIPDGPIKTFTLRG CCCEEEECCCCCCEECCCCEECCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEC IKDSPPYLHDGRLLTLADTVEFFNLVLGTKLNQQDKDALVAYLLTL CCCCCCCEECCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure PMKTAIGLTTVIAAALASAFAATSDPLPPESTYRPLPTQPFSKVKEDDEAQKPAVMERQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHHH RTLMEQRYDLANRPVAGVMMSGGRKAVQQGVRVKLPQGVTWDSLAAKEPNEIRDKDLLPK HHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEECCCCCCHHHHCCCCCHHHHHHCCCCC GFMPLPHVKQATGGQVFPDDQIRKIAHDEQRDLKRFDIDFDLPGHLTPEFPPPIFLTTHP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC ELGDVSRGDLLTIRNFYEYLNGIITPVQMEGLRLLLTPFPQEEFNQTEDRKVAQPSLGVT CCCCCCCCCEEHHHHHHHHHHHCCCCEECCCEEEEECCCCHHHHCCCHHHHHCCCCCCEE CLDCHANFHTNAAFHLTPDIRPQAERFRLDTTSLRGMYNQQIHGSKRSLRSIEDFTQFEQ EEEECCCCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HTAYFNGDHVSAARKGMHLPDRANQVAMMAQMQNIIDFPPAPKLDPSGRLDPKKATEQEL HHCEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH RGEQVFLGKGRCAECHIPAMSFTDNNMHDLKLERFYKAGQTINGMVAIPDGPIKTFTLRG CCCEEEECCCCCCEECCCCEECCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEC IKDSPPYLHDGRLLTLADTVEFFNLVLGTKLNQQDKDALVAYLLTL CCCCCCCEECCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA