| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75674884
Identifier: 75674884
GI number: 75674884
Start: 765730
End: 767709
Strand: Direct
Name: 75674884
Synonym: Nwi_0687
Alternate gene names: NA
Gene position: 765730-767709 (Clockwise)
Preceding gene: 75674883
Following gene: 75674885
Centisome position: 22.51
GC content: 63.13
Gene sequence:
>1980_bases ATGCGCCTCACAAGCCGGTTTGCTGCGGGACTAGTGGCTGCGTTCATTCTTGCGGCGATAGGCCCGCCGGCCGAAGCGGC GGCAAGGCCGTGCGAGCAGGCGGTCGGGTTCTCGGTCCTGCCCTCGCCGGTTGCGCCTTGGAAGGGGGCGCCGCTGCGCG TCATGATCACCACCGAAAAGCCGCTCCAGGGCGTGATCTCGCTGGTCGCGCCGGATGGCAGAGTCGTGGCCAGATCGTCC GACCGGCACGGCAGTGCGCCGTACTCCTGGTTCGCCGAGGCCGCTCAGCCTACGGCAGGCGTGTGGCGCGCCACCTTGAC GCTCGACAGCGCAATGGCGGATTGCAGCACAATTACGCGCGACATCTCCGTGAGCGCGCGCAAGCCAAACCCTCCACCCA TTCCATCGGGTGCGTTCTGGCAGGTGCGCAATAGCTGGGATCACACGACCGAGTCCCTGTTTTCCGCGTGGATTGAGAAG CTATTCGACGCGCCTCCCGATCAGGATCTTTCATGGAAAGCATGGCATGAAGTCCTGCACAACCGATCGCGCAATTTCCT GTTCAACTATTTAGGTCGCGGGGAAGATGACAAGCGGACGGGCCTTCGTCCCGACTGTGCTGATTTCGTGTATTTCCTGC GCGCCTATTTTGCCTACAAGATGGGATTACCCTTCGGCTATTCCAATTGCTCGCGTGGGGCCCGCGGCAAGGCGCCCAGG TGCTACCAGTGGTTCGACATGGAGCACCCCGAGAAGACGCGCCCGCAACCGCCTTCAGAACAGGAAACCGCGTCGGCTGC GGCCCCCGGCGCCATGCCGCCCGGACAAGCGCCTGCGCTTCTGCAGCCCTTTGCCTCGTTGCAGCCGGCCCCGGCCGAGA CACTCGTGGCTCCGCCGAAGGCGCGGCCGAAACGGCCGACGACGTTCAACGAATATCTGCGGGATGTCGGGGACGTCGTG CATACGGGCGCCGTTCGCGCCGCCGCGAGCGACGATAACACCGATTTCTACACTGTCGCGCTGACCCAGGAAGCGCTTCG TCCCGGCACGGTGTACGCCGATCCCTACGGCCATGTGCTGATGCTTGTGCATCGCGTGCCGGAAAAGAACGGCAAGCCGG GCGTCTTCCTCGCCGTCGATGCGGAGCCGGACGGCTCGATCACACGAAAGCGTTTCTGGCGCGGCAACTTCCTGTTCGCG CACGACCCCGCGCTGGGAAGCCCCGGCTTCAAGCGCTTTCGGCCGGTCGTGCGTGGGAAAGGCGGTGCGTTGCGGCGGCT GGTCAACGCCGAAATCACCAGCAATACCCAGTATGCTGATTTTTCGCTCGATCAATCGGAGATGAGCGCCGAGGATTTTT ACGATCGCATGGACGACGTGATGTCGCCGGAACCGCTCGATCCCGTGAAAGCGATGACAGACGCTATCGAAAGCCTGAAC GAGCAGGTGAAGACGCGGGTGACCGCGGTCGAGAACGGACGACAGTATCAGAACAAGCATGCTGGAGAGGTAGCTATGCC CAACGGCTCCGCGATCTTCGGCACGACCGGAGCCTGGGAGGATTACTCCACTCCGGCGCGCGATTTCCGTTTGCTGATCG CGATCGATGTCGTGCGGGGATTTCCCGATCGTGTCATCCGACGGGCGACGCGTTACGCGATGCCGGGCGGCAAGAGCATC GCGGAGGTGAAAAGCGAACTGCAAGGCGTGCTTGCCTCCGAGCTTGCTTCGCGAAAAATATCCTATATGCGCAGTGACGG CTCGCAATGGACGCTTTCGCTCAAGGAGGTCGTCGAGCGAGCGCCGCGCTTCGAGATGGCTTATAATCCGAACGACTGCG CCGAGGTGAGGTGGGGTGCGTCGGAAGGCTCTGAGGAGGCATCCACGTGCAAGCGGCACGCGCCGCAGGCGCAGCGCGAG AAGATGTCGTCGAAGTACCGGACCTGGTTTCACGAGCGGAACTGGCCGACCAACAGCTAG
Upstream 100 bases:
>100_bases CGCTGTTCTGTCGTGTTTTCCTTACGCGAAACGGTGCCGTCCTTAGGGCTCAAGCCCGAGGACATACTTCGCTCGAGAAC GCTATGGAAAGGTTACCGGG
Downstream 100 bases:
>100_bases AGGACGAGCAGATGGCAACCGCGAAGAACACGATCTGCCTGTGGTATGACAGGGATGCCGAGGCGGCGGCTCGCTTCTAC GCCGCGACCTTTCCTGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MRLTSRFAAGLVAAFILAAIGPPAEAAARPCEQAVGFSVLPSPVAPWKGAPLRVMITTEKPLQGVISLVAPDGRVVARSS DRHGSAPYSWFAEAAQPTAGVWRATLTLDSAMADCSTITRDISVSARKPNPPPIPSGAFWQVRNSWDHTTESLFSAWIEK LFDAPPDQDLSWKAWHEVLHNRSRNFLFNYLGRGEDDKRTGLRPDCADFVYFLRAYFAYKMGLPFGYSNCSRGARGKAPR CYQWFDMEHPEKTRPQPPSEQETASAAAPGAMPPGQAPALLQPFASLQPAPAETLVAPPKARPKRPTTFNEYLRDVGDVV HTGAVRAAASDDNTDFYTVALTQEALRPGTVYADPYGHVLMLVHRVPEKNGKPGVFLAVDAEPDGSITRKRFWRGNFLFA HDPALGSPGFKRFRPVVRGKGGALRRLVNAEITSNTQYADFSLDQSEMSAEDFYDRMDDVMSPEPLDPVKAMTDAIESLN EQVKTRVTAVENGRQYQNKHAGEVAMPNGSAIFGTTGAWEDYSTPARDFRLLIAIDVVRGFPDRVIRRATRYAMPGGKSI AEVKSELQGVLASELASRKISYMRSDGSQWTLSLKEVVERAPRFEMAYNPNDCAEVRWGASEGSEEASTCKRHAPQAQRE KMSSKYRTWFHERNWPTNS
Sequences:
>Translated_659_residues MRLTSRFAAGLVAAFILAAIGPPAEAAARPCEQAVGFSVLPSPVAPWKGAPLRVMITTEKPLQGVISLVAPDGRVVARSS DRHGSAPYSWFAEAAQPTAGVWRATLTLDSAMADCSTITRDISVSARKPNPPPIPSGAFWQVRNSWDHTTESLFSAWIEK LFDAPPDQDLSWKAWHEVLHNRSRNFLFNYLGRGEDDKRTGLRPDCADFVYFLRAYFAYKMGLPFGYSNCSRGARGKAPR CYQWFDMEHPEKTRPQPPSEQETASAAAPGAMPPGQAPALLQPFASLQPAPAETLVAPPKARPKRPTTFNEYLRDVGDVV HTGAVRAAASDDNTDFYTVALTQEALRPGTVYADPYGHVLMLVHRVPEKNGKPGVFLAVDAEPDGSITRKRFWRGNFLFA HDPALGSPGFKRFRPVVRGKGGALRRLVNAEITSNTQYADFSLDQSEMSAEDFYDRMDDVMSPEPLDPVKAMTDAIESLN EQVKTRVTAVENGRQYQNKHAGEVAMPNGSAIFGTTGAWEDYSTPARDFRLLIAIDVVRGFPDRVIRRATRYAMPGGKSI AEVKSELQGVLASELASRKISYMRSDGSQWTLSLKEVVERAPRFEMAYNPNDCAEVRWGASEGSEEASTCKRHAPQAQRE KMSSKYRTWFHERNWPTNS >Mature_659_residues MRLTSRFAAGLVAAFILAAIGPPAEAAARPCEQAVGFSVLPSPVAPWKGAPLRVMITTEKPLQGVISLVAPDGRVVARSS DRHGSAPYSWFAEAAQPTAGVWRATLTLDSAMADCSTITRDISVSARKPNPPPIPSGAFWQVRNSWDHTTESLFSAWIEK LFDAPPDQDLSWKAWHEVLHNRSRNFLFNYLGRGEDDKRTGLRPDCADFVYFLRAYFAYKMGLPFGYSNCSRGARGKAPR CYQWFDMEHPEKTRPQPPSEQETASAAAPGAMPPGQAPALLQPFASLQPAPAETLVAPPKARPKRPTTFNEYLRDVGDVV HTGAVRAAASDDNTDFYTVALTQEALRPGTVYADPYGHVLMLVHRVPEKNGKPGVFLAVDAEPDGSITRKRFWRGNFLFA HDPALGSPGFKRFRPVVRGKGGALRRLVNAEITSNTQYADFSLDQSEMSAEDFYDRMDDVMSPEPLDPVKAMTDAIESLN EQVKTRVTAVENGRQYQNKHAGEVAMPNGSAIFGTTGAWEDYSTPARDFRLLIAIDVVRGFPDRVIRRATRYAMPGGKSI AEVKSELQGVLASELASRKISYMRSDGSQWTLSLKEVVERAPRFEMAYNPNDCAEVRWGASEGSEEASTCKRHAPQAQRE KMSSKYRTWFHERNWPTNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72908; Mature: 72908
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTSRFAAGLVAAFILAAIGPPAEAAARPCEQAVGFSVLPSPVAPWKGAPLRVMITTEK CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC PLQGVISLVAPDGRVVARSSDRHGSAPYSWFAEAAQPTAGVWRATLTLDSAMADCSTITR HHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHHHH DISVSARKPNPPPIPSGAFWQVRNSWDHTTESLFSAWIEKLFDAPPDQDLSWKAWHEVLH HCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH NRSRNFLFNYLGRGEDDKRTGLRPDCADFVYFLRAYFAYKMGLPFGYSNCSRGARGKAPR CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC CYQWFDMEHPEKTRPQPPSEQETASAAAPGAMPPGQAPALLQPFASLQPAPAETLVAPPK CEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCC ARPKRPTTFNEYLRDVGDVVHTGAVRAAASDDNTDFYTVALTQEALRPGTVYADPYGHVL CCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEHHHCCCCCEEECCHHHHH MLVHRVPEKNGKPGVFLAVDAEPDGSITRKRFWRGNFLFAHDPALGSPGFKRFRPVVRGK HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCC GGALRRLVNAEITSNTQYADFSLDQSEMSAEDFYDRMDDVMSPEPLDPVKAMTDAIESLN CHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH EQVKTRVTAVENGRQYQNKHAGEVAMPNGSAIFGTTGAWEDYSTPARDFRLLIAIDVVRG HHHHHHHHHHHCCHHHHHCCCCCEECCCCCEEECCCCCCCCCCCCHHHHEEHEEHHHHHC FPDRVIRRATRYAMPGGKSIAEVKSELQGVLASELASRKISYMRSDGSQWTLSLKEVVER CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH APRFEMAYNPNDCAEVRWGASEGSEEASTCKRHAPQAQREKMSSKYRTWFHERNWPTNS CCCEEECCCCCCHHHEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRLTSRFAAGLVAAFILAAIGPPAEAAARPCEQAVGFSVLPSPVAPWKGAPLRVMITTEK CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC PLQGVISLVAPDGRVVARSSDRHGSAPYSWFAEAAQPTAGVWRATLTLDSAMADCSTITR HHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHHHH DISVSARKPNPPPIPSGAFWQVRNSWDHTTESLFSAWIEKLFDAPPDQDLSWKAWHEVLH HCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH NRSRNFLFNYLGRGEDDKRTGLRPDCADFVYFLRAYFAYKMGLPFGYSNCSRGARGKAPR CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC CYQWFDMEHPEKTRPQPPSEQETASAAAPGAMPPGQAPALLQPFASLQPAPAETLVAPPK CEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCC ARPKRPTTFNEYLRDVGDVVHTGAVRAAASDDNTDFYTVALTQEALRPGTVYADPYGHVL CCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEHHHCCCCCEEECCHHHHH MLVHRVPEKNGKPGVFLAVDAEPDGSITRKRFWRGNFLFAHDPALGSPGFKRFRPVVRGK HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCC GGALRRLVNAEITSNTQYADFSLDQSEMSAEDFYDRMDDVMSPEPLDPVKAMTDAIESLN CHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH EQVKTRVTAVENGRQYQNKHAGEVAMPNGSAIFGTTGAWEDYSTPARDFRLLIAIDVVRG HHHHHHHHHHHCCHHHHHCCCCCEECCCCCEEECCCCCCCCCCCCHHHHEEHEEHHHHHC FPDRVIRRATRYAMPGGKSIAEVKSELQGVLASELASRKISYMRSDGSQWTLSLKEVVER CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH APRFEMAYNPNDCAEVRWGASEGSEEASTCKRHAPQAQREKMSSKYRTWFHERNWPTNS CCCEEECCCCCCHHHEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA