| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674864
Identifier: 75674864
GI number: 75674864
Start: 748223
End: 749494
Strand: Direct
Name: 75674864
Synonym: Nwi_0667
Alternate gene names: NA
Gene position: 748223-749494 (Clockwise)
Preceding gene: 75674863
Following gene: 75674865
Centisome position: 21.99
GC content: 59.36
Gene sequence:
>1272_bases ATGGCAATCAATCCCACCCGGAGGCAAGTCCTTCAAGGCGCAGCAGCCATTGCCGGCTCCGCCGTGTTCGCTCCCGCCAT CCATGCCGACCCAGCTCCTATCAGGCTGGGCACACTGGCCTCGCTGGAGGGGCCGCTCGCCATCAACGGGCAGGATGCCT ATCGCGTCGTTGAGCTCCTTCTCGAGGAAGCCGGTTACAAAGCGGGCGGCCGCAAGATCGAATGGATTCGAGAATCATCG AATGGCAAACCGGACGTCGCGCTCGCACGGACCCGCAAGCTAATCGAGCAGGACAAGGCGGATGTCGTGATCGGGCCACT GGCGGGAGCCGAGGGCATCGCGGTTCGAGATTATTCGCGCACCGTGCCGAACAAGACCTTCATTAACGGCTCGTCCGCAT CGCAGGACAATACGCTCCGAAATTCGTCGTCGAACTATTTCCGCTTCAGCACGGACGGGACGCAATGGACCGCGGGGCTC GGTGAGTACACGAAGAATGTCCTCAACATCGGCGAAGTCACGGTTGTCGCTTCCGACTACGCCTTTCCTTATTCGCAGGT GTTCGGGTTCAGTCTTGAGTTCACGCGGGCAGGGGGCAAACTCAACTATCTCTGGACGCCGTTCGGAACGTCCGACTACA CCTCGCTGATCGCGCAGATACCAAAGTCGTCCGGAGCGCTCTACGTCGTCTATGGCGGCTCGGACGGACTGGCTTTCCTT ACCCAGTATGCGCAGGCCGGCGGCTCGCTGCCGCTTCTGGGCGGAACCCTTCTTGCGGATCAGACGCTGTTCTCCGCCCG CGGTCCCCACCGCAAGGTGCTTGAAGGCACCATATCCGCCGGCCCGATCGGGGATCACTACGACAACCCGGTCTGGAAGG ATTTCCAGGCTCGCTATGTCCGACGCTGGAGCAAGGATGTCGGGCAGCAGACGCCCGGTACGCTTGCGTTTGCCTATTCC ACCAACTTGCAGGCGACGCTTCTCGCGCTCAATGCCGTGGATGGCGATCTCTCGGGAAATCAGGAGGCTTTCCGAGAGGC GCTGCGAAAGCTTGAGTTCAAGAACTATATCGATGCTCATGTGAAGCTCGATCACAACAGGCAGGCGATTTCCGACAATT TTCTCACCAAGGTCGAGGTACAGGACAAGCGGTTGCAGTCGGTGGTTATCAAGAAGGTTCCGAATGTGAACCAGACTCTT GGATTTCCCGAAGACAAGTATGTCGCGCTCGGCGCGCCGTCCCGCAACAACACCGGAAATGTGAAGATATGA
Upstream 100 bases:
>100_bases ATCAAGCGAGGGAATGCCTTGCTCGCGCGCGATCGAAGCCCGGTATCGCGCTCACAAACCTCTATCGCTCCTTAACAAAA TTCATTTGAGGACCACGACC
Downstream 100 bases:
>100_bases CAGCCGTCGACAGTAGCCGGAGACAACCGGAGTCTCGAGGAGTCCTGCGGATATGTGCCGCGACACGATCTCGTCCGCCG ACACTCGAATTGTCGGGGAT
Product: ABC-type branched-chain amino acid transport systems periplasmic component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MAINPTRRQVLQGAAAIAGSAVFAPAIHADPAPIRLGTLASLEGPLAINGQDAYRVVELLLEEAGYKAGGRKIEWIRESS NGKPDVALARTRKLIEQDKADVVIGPLAGAEGIAVRDYSRTVPNKTFINGSSASQDNTLRNSSSNYFRFSTDGTQWTAGL GEYTKNVLNIGEVTVVASDYAFPYSQVFGFSLEFTRAGGKLNYLWTPFGTSDYTSLIAQIPKSSGALYVVYGGSDGLAFL TQYAQAGGSLPLLGGTLLADQTLFSARGPHRKVLEGTISAGPIGDHYDNPVWKDFQARYVRRWSKDVGQQTPGTLAFAYS TNLQATLLALNAVDGDLSGNQEAFREALRKLEFKNYIDAHVKLDHNRQAISDNFLTKVEVQDKRLQSVVIKKVPNVNQTL GFPEDKYVALGAPSRNNTGNVKI
Sequences:
>Translated_423_residues MAINPTRRQVLQGAAAIAGSAVFAPAIHADPAPIRLGTLASLEGPLAINGQDAYRVVELLLEEAGYKAGGRKIEWIRESS NGKPDVALARTRKLIEQDKADVVIGPLAGAEGIAVRDYSRTVPNKTFINGSSASQDNTLRNSSSNYFRFSTDGTQWTAGL GEYTKNVLNIGEVTVVASDYAFPYSQVFGFSLEFTRAGGKLNYLWTPFGTSDYTSLIAQIPKSSGALYVVYGGSDGLAFL TQYAQAGGSLPLLGGTLLADQTLFSARGPHRKVLEGTISAGPIGDHYDNPVWKDFQARYVRRWSKDVGQQTPGTLAFAYS TNLQATLLALNAVDGDLSGNQEAFREALRKLEFKNYIDAHVKLDHNRQAISDNFLTKVEVQDKRLQSVVIKKVPNVNQTL GFPEDKYVALGAPSRNNTGNVKI >Mature_422_residues AINPTRRQVLQGAAAIAGSAVFAPAIHADPAPIRLGTLASLEGPLAINGQDAYRVVELLLEEAGYKAGGRKIEWIRESSN GKPDVALARTRKLIEQDKADVVIGPLAGAEGIAVRDYSRTVPNKTFINGSSASQDNTLRNSSSNYFRFSTDGTQWTAGLG EYTKNVLNIGEVTVVASDYAFPYSQVFGFSLEFTRAGGKLNYLWTPFGTSDYTSLIAQIPKSSGALYVVYGGSDGLAFLT QYAQAGGSLPLLGGTLLADQTLFSARGPHRKVLEGTISAGPIGDHYDNPVWKDFQARYVRRWSKDVGQQTPGTLAFAYST NLQATLLALNAVDGDLSGNQEAFREALRKLEFKNYIDAHVKLDHNRQAISDNFLTKVEVQDKRLQSVVIKKVPNVNQTLG FPEDKYVALGAPSRNNTGNVKI
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45783; Mature: 45652
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINPTRRQVLQGAAAIAGSAVFAPAIHADPAPIRLGTLASLEGPLAINGQDAYRVVELL CCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEEEHHCCCCCEEECCCHHHHHHHHH LEEAGYKAGGRKIEWIRESSNGKPDVALARTRKLIEQDKADVVIGPLAGAEGIAVRDYSR HHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCC TVPNKTFINGSSASQDNTLRNSSSNYFRFSTDGTQWTAGLGEYTKNVLNIGEVTVVASDY CCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHHCCCEEEEEECCC AFPYSQVFGFSLEFTRAGGKLNYLWTPFGTSDYTSLIAQIPKSSGALYVVYGGSDGLAFL CCCHHHHHCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHH TQYAQAGGSLPLLGGTLLADQTLFSARGPHRKVLEGTISAGPIGDHYDNPVWKDFQARYV HHHHHCCCCCCEECCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH RRWSKDVGQQTPGTLAFAYSTNLQATLLALNAVDGDLSGNQEAFREALRKLEFKNYIDAH HHHHHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCEEE VKLDHNRQAISDNFLTKVEVQDKRLQSVVIKKVPNVNQTLGFPEDKYVALGAPSRNNTGN EEECCCCHHHCCCCEEEEEEHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCCCCCC VKI EEC >Mature Secondary Structure AINPTRRQVLQGAAAIAGSAVFAPAIHADPAPIRLGTLASLEGPLAINGQDAYRVVELL CCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEEEHHCCCCCEEECCCHHHHHHHHH LEEAGYKAGGRKIEWIRESSNGKPDVALARTRKLIEQDKADVVIGPLAGAEGIAVRDYSR HHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCC TVPNKTFINGSSASQDNTLRNSSSNYFRFSTDGTQWTAGLGEYTKNVLNIGEVTVVASDY CCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHHCCCEEEEEECCC AFPYSQVFGFSLEFTRAGGKLNYLWTPFGTSDYTSLIAQIPKSSGALYVVYGGSDGLAFL CCCHHHHHCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHH TQYAQAGGSLPLLGGTLLADQTLFSARGPHRKVLEGTISAGPIGDHYDNPVWKDFQARYV HHHHHCCCCCCEECCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH RRWSKDVGQQTPGTLAFAYSTNLQATLLALNAVDGDLSGNQEAFREALRKLEFKNYIDAH HHHHHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCEEE VKLDHNRQAISDNFLTKVEVQDKRLQSVVIKKVPNVNQTLGFPEDKYVALGAPSRNNTGN EEECCCCHHHCCCCEEEEEEHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCCCCCC VKI EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA