| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is braD [H]
Identifier: 75674862
GI number: 75674862
Start: 746258
End: 747151
Strand: Direct
Name: braD [H]
Synonym: Nwi_0665
Alternate gene names: 75674862
Gene position: 746258-747151 (Clockwise)
Preceding gene: 75674860
Following gene: 75674863
Centisome position: 21.94
GC content: 58.39
Gene sequence:
>894_bases TTGAGTCTCGAATTATTTCTGACGGTGGCACTCAACGGTCTTACCGTCTCCGCACTCTACTTCATCGTGGCGATCGGATT CTCGCTCATCTTCGGTCTGATGCGCTCCGTGAACATGGCGCACGGAACGCTGTTTCTTGTCGGCGCGTATGCCGGCGTCG CCGTTTTCTATCCGCTTTACGACGACGGCAACGCTTATGCCTGGATCATCGCGTTGGCCGCAGGAATTTCCGCATCGGCG ATTCTTGGTGTCGTTTTGCAGATTGTCTTTCTTGGCTGGATGCAGGGTCAGGAGCTGCGCCAGACGCTGGTGACGATCGG AATCTCCATAATCGTCGCGGATCAACTCCTGGCGATTTTTGGCGGACTGAGTCAGCAGTTCTATGCGCCCGACATTCTGT TTGGGTCGGTGCCGGTGCCATTCGTTCAAGGCGGTCAGTACTCGACCTTCCGTCTGTTTCAGGTGGTGGTGGCGATCGGT GTCGGCTTCGGTCTTTGGCTGATCCTGCAACGGACAAAGCTCGGCATCGTGGTGCGCGCCGGTGTCGATGACCGGGCGAT GCTGGCGGCGCAAGGCGTCAACGTGCCGCTCATCTCAGTTGTCATTTTTGCGATCGGCGCCGCTCTTGCCGGCCTGGCCG GGGTCATAGGTGGCACCGCGCAGCCCTTCGGCCAGGAGAAGGATATCGAGTTCCTGCTGACATCACTTGTCGTGGTTATC GTGGGCGGCATGGGATCGTTACCCGGGACGGCGCTCGGCGCACTTCTGGTCGGAATGGCCGAGCAGTTCGGACAATCGTT GTTCCCGGCTTACTCGGTGATGCTCACATTGCTCATCATGGTAGCGGTCCTCGCGTTCCGGCCTCACGGTCTTCTGGGAA GAAAACTATCATGA
Upstream 100 bases:
>100_bases GCAATGCGCAAAATACGTAAAATAAATCTGCTTCTCATTTGCTATAGAATCTTCACGCGTTGAAAGAGCGCGATGTATCC GGAATGGTGGAGCGCGTGAC
Downstream 100 bases:
>100_bases GTGACGCGGCTTCCACATCTACTACGGAGGTCGTCGGACGCTCCTTTGCTTTGTCGTCCCTGATCACTTCCGCTGTTCTG ATAGCGCTTGTTACGCTTCC
Product: branched chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSLELFLTVALNGLTVSALYFIVAIGFSLIFGLMRSVNMAHGTLFLVGAYAGVAVFYPLYDDGNAYAWIIALAAGISASA ILGVVLQIVFLGWMQGQELRQTLVTIGISIIVADQLLAIFGGLSQQFYAPDILFGSVPVPFVQGGQYSTFRLFQVVVAIG VGFGLWLILQRTKLGIVVRAGVDDRAMLAAQGVNVPLISVVIFAIGAALAGLAGVIGGTAQPFGQEKDIEFLLTSLVVVI VGGMGSLPGTALGALLVGMAEQFGQSLFPAYSVMLTLLIMVAVLAFRPHGLLGRKLS
Sequences:
>Translated_297_residues MSLELFLTVALNGLTVSALYFIVAIGFSLIFGLMRSVNMAHGTLFLVGAYAGVAVFYPLYDDGNAYAWIIALAAGISASA ILGVVLQIVFLGWMQGQELRQTLVTIGISIIVADQLLAIFGGLSQQFYAPDILFGSVPVPFVQGGQYSTFRLFQVVVAIG VGFGLWLILQRTKLGIVVRAGVDDRAMLAAQGVNVPLISVVIFAIGAALAGLAGVIGGTAQPFGQEKDIEFLLTSLVVVI VGGMGSLPGTALGALLVGMAEQFGQSLFPAYSVMLTLLIMVAVLAFRPHGLLGRKLS >Mature_296_residues SLELFLTVALNGLTVSALYFIVAIGFSLIFGLMRSVNMAHGTLFLVGAYAGVAVFYPLYDDGNAYAWIIALAAGISASAI LGVVLQIVFLGWMQGQELRQTLVTIGISIIVADQLLAIFGGLSQQFYAPDILFGSVPVPFVQGGQYSTFRLFQVVVAIGV GFGLWLILQRTKLGIVVRAGVDDRAMLAAQGVNVPLISVVIFAIGAALAGLAGVIGGTAQPFGQEKDIEFLLTSLVVVIV GGMGSLPGTALGALLVGMAEQFGQSLFPAYSVMLTLLIMVAVLAFRPHGLLGRKLS
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=303, Percent_Identity=24.4224422442244, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 31115; Mature: 30983
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLELFLTVALNGLTVSALYFIVAIGFSLIFGLMRSVNMAHGTLFLVGAYAGVAVFYPLY CCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHEEEEEE DDGNAYAWIIALAAGISASAILGVVLQIVFLGWMQGQELRQTLVTIGISIIVADQLLAIF ECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GGLSQQFYAPDILFGSVPVPFVQGGQYSTFRLFQVVVAIGVGFGLWLILQRTKLGIVVRA CCCCHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC GVDDRAMLAAQGVNVPLISVVIFAIGAALAGLAGVIGGTAQPFGQEKDIEFLLTSLVVVI CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH VGGMGSLPGTALGALLVGMAEQFGQSLFPAYSVMLTLLIMVAVLAFRPHGLLGRKLS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SLELFLTVALNGLTVSALYFIVAIGFSLIFGLMRSVNMAHGTLFLVGAYAGVAVFYPLY CEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHEEEEEE DDGNAYAWIIALAAGISASAILGVVLQIVFLGWMQGQELRQTLVTIGISIIVADQLLAIF ECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GGLSQQFYAPDILFGSVPVPFVQGGQYSTFRLFQVVVAIGVGFGLWLILQRTKLGIVVRA CCCCHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC GVDDRAMLAAQGVNVPLISVVIFAIGAALAGLAGVIGGTAQPFGQEKDIEFLLTSLVVVI CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH VGGMGSLPGTALGALLVGMAEQFGQSLFPAYSVMLTLLIMVAVLAFRPHGLLGRKLS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]