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The map label for this gene is cbpA [H]

Identifier: 75674822

GI number: 75674822

Start: 703592

End: 704542

Strand: Direct

Name: cbpA [H]

Synonym: Nwi_0624

Alternate gene names: 75674822

Gene position: 703592-704542 (Clockwise)

Preceding gene: 75674821

Following gene: 75674826

Centisome position: 20.68

GC content: 66.25

Gene sequence:

>951_bases
ATGCGCGACCCCTATGAGGTCCTGGGGGTGCAGCGGGGTGCCAGCGCCGCCGCCATCAAAAGTGCCTTTCGCAAGCTCGC
GAAGAAGCACCATCCCGATGCCAACAAGAACGATCCGAAGGCCGCCGAGCGGTTCGCGGAGTTGAATTCCGCCAACGAGA
TCCTGGGCGACGAGGTCAGACGCAAGCAGTTCGACCGCGGCGAGATCGACGCGGACGGCAAGCCGCGGTTCCAGGGTTTC
CCGGGCGGCGGCGGTCCGCGCGGCCAGCGGCCCGGCGGCGGCTTCGAGCAACACGGCTTCCGCGGCGGCGGCCCCGGTTT
TGACGGCGGGTTTGAGGATATCCTCAACAGCATGTTCGGCGGCGCGCGGGGTGGACGCCGGCCCGGTGCGCAGCCGTTCG
ACTTCGAGTCCAGCACGTTCGGTACGCCTGATCTCGATCTCAACGTCGCCATGACGGTAACGCTCGAGGAGTCGCTCAAG
GGTGGAGAAAAACGCATCCGCCTGCCCAGCGGCAAGGAACTCAATGTCAGGATTCCGCCCGGCGTCACGTCGGGCCAGCA
GATCCGGCTGAGAGGACAGGGCGAAACCGTGCCGGGGCATCGTCCCGGCGATCTCCTGATTACGGTGACGGTTGCGCCGC
ATCCGTTCTTCAAGGTCGACGGCAGCGATCTGCGCGCCGAACTGCCGATCACGCTCTATGAGTCGGTGCTGGGCGGCAAG
ATACGGGTGCCGACGCTCGGCGGTGCGGTGGAACTGTCGATCCCGAAGAACACGTCGGGCGGCCGCACCTTCCGCCTCAA
GGGCAAGGGTATCCCGAAGGGCGGGGTCACCGGCGATCTGTTCGTGACGACGCGGATCGTGCTGCCCGATGGCAATGATG
CCGAGCTTGAAGCGCTGATGGAGAAGTGGCGTGACGCGCGCTCCTACAACCCCCGTGGCGATCTGGGTTAG

Upstream 100 bases:

>100_bases
TAGGCTGACGACCTCGTTGCAAAAATGCCACGGATACCCCAAATGATGAGCGCGTGGGTCCGGGGGCCCATTGTCCAGAT
TCCTGAAGGAGACGTTAAGG

Downstream 100 bases:

>100_bases
CGCGCTCGCGCCGGCGAACCTTGATCGCGCGACGGGATGGCCGGGATGCCCATCCCGTTGTCGCGCAACCGGGCTTGAGG
ATGCACGGCGAACTTGGGGG

Product: heat shock protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRDPYEVLGVQRGASAAAIKSAFRKLAKKHHPDANKNDPKAAERFAELNSANEILGDEVRRKQFDRGEIDADGKPRFQGF
PGGGGPRGQRPGGGFEQHGFRGGGPGFDGGFEDILNSMFGGARGGRRPGAQPFDFESSTFGTPDLDLNVAMTVTLEESLK
GGEKRIRLPSGKELNVRIPPGVTSGQQIRLRGQGETVPGHRPGDLLITVTVAPHPFFKVDGSDLRAELPITLYESVLGGK
IRVPTLGGAVELSIPKNTSGGRTFRLKGKGIPKGGVTGDLFVTTRIVLPDGNDAELEALMEKWRDARSYNPRGDLG

Sequences:

>Translated_316_residues
MRDPYEVLGVQRGASAAAIKSAFRKLAKKHHPDANKNDPKAAERFAELNSANEILGDEVRRKQFDRGEIDADGKPRFQGF
PGGGGPRGQRPGGGFEQHGFRGGGPGFDGGFEDILNSMFGGARGGRRPGAQPFDFESSTFGTPDLDLNVAMTVTLEESLK
GGEKRIRLPSGKELNVRIPPGVTSGQQIRLRGQGETVPGHRPGDLLITVTVAPHPFFKVDGSDLRAELPITLYESVLGGK
IRVPTLGGAVELSIPKNTSGGRTFRLKGKGIPKGGVTGDLFVTTRIVLPDGNDAELEALMEKWRDARSYNPRGDLG
>Mature_316_residues
MRDPYEVLGVQRGASAAAIKSAFRKLAKKHHPDANKNDPKAAERFAELNSANEILGDEVRRKQFDRGEIDADGKPRFQGF
PGGGGPRGQRPGGGFEQHGFRGGGPGFDGGFEDILNSMFGGARGGRRPGAQPFDFESSTFGTPDLDLNVAMTVTLEESLK
GGEKRIRLPSGKELNVRIPPGVTSGQQIRLRGQGETVPGHRPGDLLITVTVAPHPFFKVDGSDLRAELPITLYESVLGGK
IRVPTLGGAVELSIPKNTSGGRTFRLKGKGIPKGGVTGDLFVTTRIVLPDGNDAELEALMEKWRDARSYNPRGDLG

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=344, Percent_Identity=28.4883720930233, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI56549115, Length=348, Percent_Identity=27.2988505747126, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI201862518, Length=336, Percent_Identity=28.2738095238095, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI201862587, Length=336, Percent_Identity=28.2738095238095, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI5453690, Length=337, Percent_Identity=27.893175074184, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI205360840, Length=170, Percent_Identity=35.8823529411765, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI205360838, Length=170, Percent_Identity=35.8823529411765, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI39204547, Length=324, Percent_Identity=27.4691358024691, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI29126218, Length=62, Percent_Identity=51.6129032258064, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI7706495, Length=64, Percent_Identity=53.125, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI56687498, Length=64, Percent_Identity=51.5625, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI45504382, Length=62, Percent_Identity=45.1612903225806, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI9558755, Length=210, Percent_Identity=30.4761904761905, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787235, Length=336, Percent_Identity=35.4166666666667, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1786197, Length=143, Percent_Identity=39.1608391608392, Blast_Score=105, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17534355, Length=342, Percent_Identity=29.5321637426901, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17553098, Length=349, Percent_Identity=26.3610315186246, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17553096, Length=349, Percent_Identity=26.3610315186246, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI212645553, Length=65, Percent_Identity=50.7692307692308, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115532378, Length=64, Percent_Identity=50, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17554644, Length=63, Percent_Identity=50.7936507936508, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115532476, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324321, Length=352, Percent_Identity=26.1363636363636, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323813, Length=142, Percent_Identity=42.2535211267606, Blast_Score=77, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322194, Length=62, Percent_Identity=45.1612903225806, Blast_Score=63, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24658562, Length=331, Percent_Identity=29.9093655589124, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24658555, Length=331, Percent_Identity=29.9093655589124, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI85726398, Length=351, Percent_Identity=29.9145299145299, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI19920464, Length=338, Percent_Identity=26.3313609467456, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI18858081, Length=350, Percent_Identity=26.2857142857143, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI45549272, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45552813, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552811, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355911, Length=102, Percent_Identity=41.1764705882353, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 33833; Mature: 33833

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPYEVLGVQRGASAAAIKSAFRKLAKKHHPDANKNDPKAAERFAELNSANEILGDEVR
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RKQFDRGEIDADGKPRFQGFPGGGGPRGQRPGGGFEQHGFRGGGPGFDGGFEDILNSMFG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHC
GARGGRRPGAQPFDFESSTFGTPDLDLNVAMTVTLEESLKGGEKRIRLPSGKELNVRIPP
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCEEEECCCCCEEEEECCC
GVTSGQQIRLRGQGETVPGHRPGDLLITVTVAPHPFFKVDGSDLRAELPITLYESVLGGK
CCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEECCHHHHHHHHCCE
IRVPTLGGAVELSIPKNTSGGRTFRLKGKGIPKGGVTGDLFVTTRIVLPDGNDAELEALM
EEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHH
EKWRDARSYNPRGDLG
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRDPYEVLGVQRGASAAAIKSAFRKLAKKHHPDANKNDPKAAERFAELNSANEILGDEVR
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RKQFDRGEIDADGKPRFQGFPGGGGPRGQRPGGGFEQHGFRGGGPGFDGGFEDILNSMFG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHC
GARGGRRPGAQPFDFESSTFGTPDLDLNVAMTVTLEESLKGGEKRIRLPSGKELNVRIPP
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCEEEECCCCCEEEEECCC
GVTSGQQIRLRGQGETVPGHRPGDLLITVTVAPHPFFKVDGSDLRAELPITLYESVLGGK
CCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEECCHHHHHHHHCCE
IRVPTLGGAVELSIPKNTSGGRTFRLKGKGIPKGGVTGDLFVTTRIVLPDGNDAELEALM
EEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHH
EKWRDARSYNPRGDLG
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA