| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674717
Identifier: 75674717
GI number: 75674717
Start: 576272
End: 576919
Strand: Direct
Name: 75674717
Synonym: Nwi_0519
Alternate gene names: NA
Gene position: 576272-576919 (Clockwise)
Preceding gene: 75674715
Following gene: 75674718
Centisome position: 16.94
GC content: 64.81
Gene sequence:
>648_bases ATGTCTGGCACATCGTCTCCCGGTCCCGCTCCCGACGCGCTCGAACTCGCGGCGCTGCTCTGCTCGCGCGTCTGTCACGA TCTCATTAGTCCCGTGGGCGCAATCGTCAACGGACTTGAAGTGCTGGACGACGATCCAAAGCCGGACGATCGCGAATTCG CCCTCGATCTGATTCGCAAGAGCGCCAGAACCGCGTCGGCGCGGCTGCAGTTTTGCCGTCTCGCCTTCGGGGCGGCGGGC TCGGTCAGCGCGCAGATCGATCTGGGCGATGCGCAGAACATCGCGAAGGGTCATTTCGAGGACGGCAAGATCACGCTCGC CTGGAATCTGCCGCGCCTGCTGCTGCCGAAGAACAGGGTGAAACTTCTGCTCAACCTGCTGGTGATCGCGCAGCAGACGA TTCCGCGCGGAGGGGTGCTGACGATCGACCCGCTCGGTGAGGGCGAGGCCATGGGCTTTCAGATCACCGCCGCCGGGCTG AACGCCCGCGTGTCGCAGCCCGTCGCCGAGCTTCTGGCATCCGGTTCGACCGGCGCGGTCTATGCCCACGCGGTTCAACC CTATTACACACGTCTACTGGCCGAGGCCTGCGGCATCAGCATCTCCCTGGTCGCCGAGGGTGACAAGGTGGTGGCAACCG CCCGTTAA
Upstream 100 bases:
>100_bases GCAGCGCGGGCTCAGGCCGTGTATCAAACCCTGAAGGTCCTTTGATTCGCCGTGTCCGCGCGCAGCGGAGTTGCCGAAAC AGATCCCAGGAACAGGTTTT
Downstream 100 bases:
>100_bases GGTCTCGACCGACCGGCCAGGTTAACGAATGGTTTCTTGAGCATTTCGCCCCTGATCGGATCAGAAGCGAGGCTTGAGAT TGTTATTCGGCGCGTCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDDPKPDDREFALDLIRKSARTASARLQFCRLAFGAAG SVSAQIDLGDAQNIAKGHFEDGKITLAWNLPRLLLPKNRVKLLLNLLVIAQQTIPRGGVLTIDPLGEGEAMGFQITAAGL NARVSQPVAELLASGSTGAVYAHAVQPYYTRLLAEACGISISLVAEGDKVVATAR
Sequences:
>Translated_215_residues MSGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDDPKPDDREFALDLIRKSARTASARLQFCRLAFGAAG SVSAQIDLGDAQNIAKGHFEDGKITLAWNLPRLLLPKNRVKLLLNLLVIAQQTIPRGGVLTIDPLGEGEAMGFQITAAGL NARVSQPVAELLASGSTGAVYAHAVQPYYTRLLAEACGISISLVAEGDKVVATAR >Mature_214_residues SGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDDPKPDDREFALDLIRKSARTASARLQFCRLAFGAAGS VSAQIDLGDAQNIAKGHFEDGKITLAWNLPRLLLPKNRVKLLLNLLVIAQQTIPRGGVLTIDPLGEGEAMGFQITAAGLN ARVSQPVAELLASGSTGAVYAHAVQPYYTRLLAEACGISISLVAEGDKVVATAR
Specific function: Unknown
COG id: COG5385
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22477; Mature: 22346
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDDPKPDDREFALDLIRK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SARTASARLQFCRLAFGAAGSVSAQIDLGDAQNIAKGHFEDGKITLAWNLPRLLLPKNRV HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCCCEEEEEECCCHHHCCHHHH KLLLNLLVIAQQTIPRGGVLTIDPLGEGEAMGFQITAAGLNARVSQPVAELLASGSTGAV HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEE YAHAVQPYYTRLLAEACGISISLVAEGDKVVATAR EEEHHHHHHHHHHHHHHCCEEEEEECCCEEEEECC >Mature Secondary Structure SGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDDPKPDDREFALDLIRK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SARTASARLQFCRLAFGAAGSVSAQIDLGDAQNIAKGHFEDGKITLAWNLPRLLLPKNRV HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCCCEEEEEECCCHHHCCHHHH KLLLNLLVIAQQTIPRGGVLTIDPLGEGEAMGFQITAAGLNARVSQPVAELLASGSTGAV HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEE YAHAVQPYYTRLLAEACGISISLVAEGDKVVATAR EEEHHHHHHHHHHHHHHCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA