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The map label for this gene is ompA [H]

Identifier: 75674700

GI number: 75674700

Start: 559187

End: 560578

Strand: Direct

Name: ompA [H]

Synonym: Nwi_0502

Alternate gene names: 75674700

Gene position: 559187-560578 (Clockwise)

Preceding gene: 75674698

Following gene: 75674701

Centisome position: 16.44

GC content: 63.36

Gene sequence:

>1392_bases
ATGCGCGGTTTTTTCAGATGGAGCAGCAAGTGGTGGCCGGGTGTCATCCCGCTCACGGTACTGTGGGTGCTGGCAGCCTG
GACGACGACGGCTCCGCTGGAAGCCGATCTGAGCGAGCAGACCGCGGTCGCGCTCAAGGACAGCGTTCTCGATAAGACCG
CCATCAGCGCGGCCGGACGCGACATCACGTTCTCCGCCGATGCGTTCTCAGAGCAGGAACGCAGCAATGCGGTGGCCTCG
GTGGAGACCGTTCCGGGCGTGCGACGGGTCAACGATCGCACCGCGCTCGTCGCCGAAGCCAAACCGTTCGTGTGGACCAT
CGAACGTGGGGTCGGAAGGGTGACGCTCGGCGGAAGCGCGCCGTTGCCCGTGGTCAGGAACAAGCTGCTGGATGCGGCGC
GTGCGAGGTTTGCCGGCGTCGACATCGCCGATCGCATGGATTTGAAGCGCGGCGCGCCGCCGCGGTTCGAAGCCGCGGCG
ATATTGCTGATCGGCGAGACGAGCAAGCTGAAGAACGGCAAGGCAACGATTTCGGACCTGACGGTCAATCTGTCGGGCAT
GGCGCGTGAACTGGGTGGACGCGAGGCGATCGCCGCGGCGCTGAAGAACCTGCCCGAGGGATACTCGGTCGCCGACGATA
TCCAGGCCCCGCCATACGTCTTCGAGGCCAACAAGGATCCGGTCTCCGGGGTGCTGACATTGACCGGATATGTGCCCGAT
AACGCGGTTCATGCGGCGATCGTCGCATCGGCGGGCCGCAAGTTCGGCGAGAAGATCGTTGATAAGCTCAAGGCGAGTCT
CGGTGCGCCGGCAGGCTTCGACGCCGTCGTCACGCGGGCGCTGCGTTCGTTGTCGCGCCTGTCGACAGGAAGACTGGTCG
TCTCCGATCGGAATGTCGAACTCTCCGGCGACGCGCTATACGACCTGGCCGGAAAACAGATCCGTGCTGACCTGCCCAAG
GATCTTCCGCGCGGCTGGGAGACGAAAACGGACGTTTCAATCAAGCCGTCGGCGTCCCCGGTCGATCCGACGGTTTGCCA
GCAACTGTTCGGCGAGCTTCTTGAAAAGCGCACCATCCAGTTCGAAGCCGGTCAGGCGACTTTGCACCTCGATTCGATCG
GCCTGCTGGATCAATTGACGGAAACCGCGCTCCGTTGCCAGACGGCCACCATCGAGATCGTGGGTCACACCGATAGCGAC
GGCGACGCTTCGTTCAACCAGACACTGTCCGAGCGACGCGCGCAGGCGGTGGTGGATTTTCTCGTGAAAGCCGGATTGCC
CGCCAATCGGTTCACGCCGATGGGGCGGGGCAGCGCTCAGCCGATCGCCACCAACGACACCGACGAGGGCAAAGCGAAAA
ACCGACGCATTGATTTCATTGTGAGGCAGTAG

Upstream 100 bases:

>100_bases
CCGACCGAATCGCGTCCGGCTTTACCCGGCGCGCGCTTCCAAATGGACCGCATGACGCGGTCCATCGCAAGCCGGCGGAT
TTTGCGCGACAGGATATCGA

Downstream 100 bases:

>100_bases
GGATATGGTCTACCTGGCAGGGTTTCACTGGGTCTGGCTCGTTCTATCGTTGCTGCTTGGCCTTGCCATGGGCTGGATCG
CGGTGGTTCATCGCGGGCGG

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MRGFFRWSSKWWPGVIPLTVLWVLAAWTTTAPLEADLSEQTAVALKDSVLDKTAISAAGRDITFSADAFSEQERSNAVAS
VETVPGVRRVNDRTALVAEAKPFVWTIERGVGRVTLGGSAPLPVVRNKLLDAARARFAGVDIADRMDLKRGAPPRFEAAA
ILLIGETSKLKNGKATISDLTVNLSGMARELGGREAIAAALKNLPEGYSVADDIQAPPYVFEANKDPVSGVLTLTGYVPD
NAVHAAIVASAGRKFGEKIVDKLKASLGAPAGFDAVVTRALRSLSRLSTGRLVVSDRNVELSGDALYDLAGKQIRADLPK
DLPRGWETKTDVSIKPSASPVDPTVCQQLFGELLEKRTIQFEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGHTDSD
GDASFNQTLSERRAQAVVDFLVKAGLPANRFTPMGRGSAQPIATNDTDEGKAKNRRIDFIVRQ

Sequences:

>Translated_463_residues
MRGFFRWSSKWWPGVIPLTVLWVLAAWTTTAPLEADLSEQTAVALKDSVLDKTAISAAGRDITFSADAFSEQERSNAVAS
VETVPGVRRVNDRTALVAEAKPFVWTIERGVGRVTLGGSAPLPVVRNKLLDAARARFAGVDIADRMDLKRGAPPRFEAAA
ILLIGETSKLKNGKATISDLTVNLSGMARELGGREAIAAALKNLPEGYSVADDIQAPPYVFEANKDPVSGVLTLTGYVPD
NAVHAAIVASAGRKFGEKIVDKLKASLGAPAGFDAVVTRALRSLSRLSTGRLVVSDRNVELSGDALYDLAGKQIRADLPK
DLPRGWETKTDVSIKPSASPVDPTVCQQLFGELLEKRTIQFEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGHTDSD
GDASFNQTLSERRAQAVVDFLVKAGLPANRFTPMGRGSAQPIATNDTDEGKAKNRRIDFIVRQ
>Mature_463_residues
MRGFFRWSSKWWPGVIPLTVLWVLAAWTTTAPLEADLSEQTAVALKDSVLDKTAISAAGRDITFSADAFSEQERSNAVAS
VETVPGVRRVNDRTALVAEAKPFVWTIERGVGRVTLGGSAPLPVVRNKLLDAARARFAGVDIADRMDLKRGAPPRFEAAA
ILLIGETSKLKNGKATISDLTVNLSGMARELGGREAIAAALKNLPEGYSVADDIQAPPYVFEANKDPVSGVLTLTGYVPD
NAVHAAIVASAGRKFGEKIVDKLKASLGAPAGFDAVVTRALRSLSRLSTGRLVVSDRNVELSGDALYDLAGKQIRADLPK
DLPRGWETKTDVSIKPSASPVDPTVCQQLFGELLEKRTIQFEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGHTDSD
GDASFNQTLSERRAQAVVDFLVKAGLPANRFTPMGRGSAQPIATNDTDEGKAKNRRIDFIVRQ

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=107, Percent_Identity=35.5140186915888, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI48994946, Length=103, Percent_Identity=33.9805825242718, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 49637; Mature: 49637

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFFRWSSKWWPGVIPLTVLWVLAAWTTTAPLEADLSEQTAVALKDSVLDKTAISAAGR
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DITFSADAFSEQERSNAVASVETVPGVRRVNDRTALVAEAKPFVWTIERGVGRVTLGGSA
CEEEECHHHHHHHHHCCCEEHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCC
PLPVVRNKLLDAARARFAGVDIADRMDLKRGAPPRFEAAAILLIGETSKLKNGKATISDL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEE
TVNLSGMARELGGREAIAAALKNLPEGYSVADDIQAPPYVFEANKDPVSGVLTLTGYVPD
EEEHHHHHHHHCCHHHHHHHHHHCCCCCCCHHCCCCCCEEEECCCCCCCEEEEEEEECCC
NAVHAAIVASAGRKFGEKIVDKLKASLGAPAGFDAVVTRALRSLSRLSTGRLVVSDRNVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCEE
LSGDALYDLAGKQIRADLPKDLPRGWETKTDVSIKPSASPVDPTVCQQLFGELLEKRTIQ
ECCCHHHHHCCCHHHHCCCHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEEE
FEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGHTDSDGDASFNQTLSERRAQAVVDF
EECCCEEEEECCHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
LVKAGLPANRFTPMGRGSAQPIATNDTDEGKAKNRRIDFIVRQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRGFFRWSSKWWPGVIPLTVLWVLAAWTTTAPLEADLSEQTAVALKDSVLDKTAISAAGR
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DITFSADAFSEQERSNAVASVETVPGVRRVNDRTALVAEAKPFVWTIERGVGRVTLGGSA
CEEEECHHHHHHHHHCCCEEHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCC
PLPVVRNKLLDAARARFAGVDIADRMDLKRGAPPRFEAAAILLIGETSKLKNGKATISDL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEE
TVNLSGMARELGGREAIAAALKNLPEGYSVADDIQAPPYVFEANKDPVSGVLTLTGYVPD
EEEHHHHHHHHCCHHHHHHHHHHCCCCCCCHHCCCCCCEEEECCCCCCCEEEEEEEECCC
NAVHAAIVASAGRKFGEKIVDKLKASLGAPAGFDAVVTRALRSLSRLSTGRLVVSDRNVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCEE
LSGDALYDLAGKQIRADLPKDLPRGWETKTDVSIKPSASPVDPTVCQQLFGELLEKRTIQ
ECCCHHHHHCCCHHHHCCCHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEEE
FEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGHTDSDGDASFNQTLSERRAQAVVDF
EECCCEEEEECCHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
LVKAGLPANRFTPMGRGSAQPIATNDTDEGKAKNRRIDFIVRQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]