| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674681
Identifier: 75674681
GI number: 75674681
Start: 539306
End: 539947
Strand: Direct
Name: 75674681
Synonym: Nwi_0483
Alternate gene names: NA
Gene position: 539306-539947 (Clockwise)
Preceding gene: 75674680
Following gene: 75674684
Centisome position: 15.85
GC content: 59.5
Gene sequence:
>642_bases GTGGGAGTTCGTTCACGCTGTGAAGCTCAGTTACAAAAAAAGACGCTGATTGCTGCAGAGCAGGATCGTCCCGATGTCGC CCGTCGGCGAGCGCAATGGACCAAGTATCGAGATCGGATTGATCCCACTCGGCTGGTGTTCATCGATGAGACCTGGACCA AAACCAATATGGCGCCGCTGCGGGGCTGGGCGCCGCGCGGTCAACGCATCAGAGCCAAGGTGCCGCATGGCCGCTGGCAG ACCATGACCTTTATGGCCGCTCTGCGCCACGATCGCATCACCGCGCCGTGGTTCATCGAGGGGCCGATCAACGGCGAAGC CTTCCTTCTCTACATCGAGAAGGTTCTGGTCCCGACCCTGCGGCACGGCGACATCGTCATTATGGACAACCTCGGCTCGC ACAAGGCCAGCGCCGTGCGTCGCGTCATCCGTGCCGCCGGTGCCCGGCTCTTCTACCTGCCGAAATACTCGCCTGATCTG AACCCGATCGAGCAGTTCTTTGCCAAGTTCAAACACTGGCTACGCAAAGCCGCGCAGCGGACCACCGAGGCCGTCTACAA TGCTATCGCTCCGATCCTCGAAACCGTTGCACCGGCTGAATGCGCCAACTACTTCGTCAATGCAGGATACAACCAAATCT AA
Upstream 100 bases:
>100_bases ACCGCGAATGGCTGCTGCAACGGTGCCGAAAGGACTTTACCGTGCGCGGGCTGGTGGCCGAACTTGCCGAGCGTGGCCTT AAGGTCGATTACCGCACGAT
Downstream 100 bases:
>100_bases ACTCATCATGCTCTAGCTCCCCTTCGCCCGCGCGATGCCTTCCAGGATCAGTCTGCGGGCGTCGTCGGCGCTGCCCCACT GTAACACCTTGACCCACTTG
Product: ISRm2011-2 transposase protein
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; LOW QUALITY PROTEIN Transposase; Transposase IS; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MGVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPLRGWAPRGQRIRAKVPHGRWQ TMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTLRHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDL NPIEQFFAKFKHWLRKAAQRTTEAVYNAIAPILETVAPAECANYFVNAGYNQI
Sequences:
>Translated_213_residues MGVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPLRGWAPRGQRIRAKVPHGRWQ TMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTLRHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDL NPIEQFFAKFKHWLRKAAQRTTEAVYNAIAPILETVAPAECANYFVNAGYNQI >Mature_212_residues GVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPLRGWAPRGQRIRAKVPHGRWQT MTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTLRHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDLN PIEQFFAKFKHWLRKAAQRTTEAVYNAIAPILETVAPAECANYFVNAGYNQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24545; Mature: 24414
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPL CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC RGWAPRGQRIRAKVPHGRWQTMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHC RHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDLNPIEQFFAKFKHWLRKAAQR CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH TTEAVYNAIAPILETVAPAECANYFVNAGYNQI HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC >Mature Secondary Structure GVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPL CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC RGWAPRGQRIRAKVPHGRWQTMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHC RHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDLNPIEQFFAKFKHWLRKAAQR CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH TTEAVYNAIAPILETVAPAECANYFVNAGYNQI HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA