| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is ymfK [C]
Identifier: 75674664
GI number: 75674664
Start: 522734
End: 523366
Strand: Direct
Name: ymfK [C]
Synonym: Nwi_0466
Alternate gene names: 75674664
Gene position: 522734-523366 (Clockwise)
Preceding gene: 75674661
Following gene: 75674669
Centisome position: 15.37
GC content: 65.09
Gene sequence:
>633_bases ATGGTCATGCTGACACACGCCCAGATATGGACGGCGCTGGACCGTCTGGCGGAGCGCGCCGGCCTGTCGCCATCGGGCCT CGCGAGAAGGGCGGGGCTCGACCCGACCACCTTCAACAAATCGAAACGCATCACCAGCGACGGGCGCGAGCGATGGCCCT CGACGGAGTCGGTGGCCAAGGCGTTGGCCGCCACCGGCACCGCGATCGACACTTTCGTGCAATTCATCGAAGACACGGAG CGAGCCGCCAAGGCGGTGCCGCTGCTCGGTTTCGCCGAAGCCGGCGCCGGCGGCTATTTCGACGATGGCGGTTTTCCCGT GGGTAAGGGCTGGGACGAGGTGGGGCTGCCTTGCGTCAACGACGAGCACGCTTATGCGCTGGAAATATCCGGTGACTCGA TGAAGCCGGCCTATCGCGACGGCGATGTCATCGTGGTCTCACCGGGGACGCCGATCCGGCGTGGCGATCGCGTGGTGGTG AAGACCAGGGACGGCGAGGTGATGGTGAAGGAACTCAAACGCCGCACCGCCAGGACCATTGAACTGCAATCGCTCAATCC GAGCCACGCCAACCGCACGCTGCCCGCTTCCGAGGTGGAATGGATCGCGCGGATCGTATGGGCGAGCCAATAA
Upstream 100 bases:
>100_bases GCCGCATTTTATCCGCGACACAATTGCAGGCTTGCTCCCGTTGAGGTAATAATTCCTAACTGTTGAGCGAACTCACCGCC GCGGAATCAGGACGCGCCTC
Downstream 100 bases:
>100_bases TCCCTTTCGCCTCTCCCGCTTGCGGGAGAAGCGAGGCGCCGGAATCGTTCCGTACGATCATGGCCCGGTCTACGCCACCG CGCCGTCTTTCCTGTTCTGA
Product: peptidase S24
Products: NA
Alternate protein names: Peptidase; Transcriptional Regulator; Bacteriophage Repressor; Peptidase Family S; S24 Family Peptidase; Transcriptional Regulator Protein; Phage-Related Transcriptional Regulator Protein; LexA-Like Transcriptional Repressor; Peptidase Family; Transcription Regulator Protein; Phage-Related Transcriptional Regulator; Peptidase S
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAKALAATGTAIDTFVQFIEDTE RAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVNDEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVV KTRDGEVMVKELKRRTARTIELQSLNPSHANRTLPASEVEWIARIVWASQ
Sequences:
>Translated_210_residues MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAKALAATGTAIDTFVQFIEDTE RAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVNDEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVV KTRDGEVMVKELKRRTARTIELQSLNPSHANRTLPASEVEWIARIVWASQ >Mature_210_residues MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAKALAATGTAIDTFVQFIEDTE RAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVNDEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVV KTRDGEVMVKELKRRTARTIELQSLNPSHANRTLPASEVEWIARIVWASQ
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22806; Mature: 22806
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAK CEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH ALAATGTAIDTFVQFIEDTERAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVN HHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCEEC DEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVVKTRDGEVMVKELKRRTARTI CCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHEE ELQSLNPSHANRTLPASEVEWIARIVWASQ EEECCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAK CEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH ALAATGTAIDTFVQFIEDTERAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVN HHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCEEC DEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVVKTRDGEVMVKELKRRTARTI CCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHEE ELQSLNPSHANRTLPASEVEWIARIVWASQ EEECCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA