Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is ymfK [C]

Identifier: 75674664

GI number: 75674664

Start: 522734

End: 523366

Strand: Direct

Name: ymfK [C]

Synonym: Nwi_0466

Alternate gene names: 75674664

Gene position: 522734-523366 (Clockwise)

Preceding gene: 75674661

Following gene: 75674669

Centisome position: 15.37

GC content: 65.09

Gene sequence:

>633_bases
ATGGTCATGCTGACACACGCCCAGATATGGACGGCGCTGGACCGTCTGGCGGAGCGCGCCGGCCTGTCGCCATCGGGCCT
CGCGAGAAGGGCGGGGCTCGACCCGACCACCTTCAACAAATCGAAACGCATCACCAGCGACGGGCGCGAGCGATGGCCCT
CGACGGAGTCGGTGGCCAAGGCGTTGGCCGCCACCGGCACCGCGATCGACACTTTCGTGCAATTCATCGAAGACACGGAG
CGAGCCGCCAAGGCGGTGCCGCTGCTCGGTTTCGCCGAAGCCGGCGCCGGCGGCTATTTCGACGATGGCGGTTTTCCCGT
GGGTAAGGGCTGGGACGAGGTGGGGCTGCCTTGCGTCAACGACGAGCACGCTTATGCGCTGGAAATATCCGGTGACTCGA
TGAAGCCGGCCTATCGCGACGGCGATGTCATCGTGGTCTCACCGGGGACGCCGATCCGGCGTGGCGATCGCGTGGTGGTG
AAGACCAGGGACGGCGAGGTGATGGTGAAGGAACTCAAACGCCGCACCGCCAGGACCATTGAACTGCAATCGCTCAATCC
GAGCCACGCCAACCGCACGCTGCCCGCTTCCGAGGTGGAATGGATCGCGCGGATCGTATGGGCGAGCCAATAA

Upstream 100 bases:

>100_bases
GCCGCATTTTATCCGCGACACAATTGCAGGCTTGCTCCCGTTGAGGTAATAATTCCTAACTGTTGAGCGAACTCACCGCC
GCGGAATCAGGACGCGCCTC

Downstream 100 bases:

>100_bases
TCCCTTTCGCCTCTCCCGCTTGCGGGAGAAGCGAGGCGCCGGAATCGTTCCGTACGATCATGGCCCGGTCTACGCCACCG
CGCCGTCTTTCCTGTTCTGA

Product: peptidase S24

Products: NA

Alternate protein names: Peptidase; Transcriptional Regulator; Bacteriophage Repressor; Peptidase Family S; S24 Family Peptidase; Transcriptional Regulator Protein; Phage-Related Transcriptional Regulator Protein; LexA-Like Transcriptional Repressor; Peptidase Family; Transcription Regulator Protein; Phage-Related Transcriptional Regulator; Peptidase S

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAKALAATGTAIDTFVQFIEDTE
RAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVNDEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVV
KTRDGEVMVKELKRRTARTIELQSLNPSHANRTLPASEVEWIARIVWASQ

Sequences:

>Translated_210_residues
MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAKALAATGTAIDTFVQFIEDTE
RAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVNDEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVV
KTRDGEVMVKELKRRTARTIELQSLNPSHANRTLPASEVEWIARIVWASQ
>Mature_210_residues
MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAKALAATGTAIDTFVQFIEDTE
RAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVNDEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVV
KTRDGEVMVKELKRRTARTIELQSLNPSHANRTLPASEVEWIARIVWASQ

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22806; Mature: 22806

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAK
CEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH
ALAATGTAIDTFVQFIEDTERAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVN
HHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCEEC
DEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVVKTRDGEVMVKELKRRTARTI
CCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHEE
ELQSLNPSHANRTLPASEVEWIARIVWASQ
EEECCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVMLTHAQIWTALDRLAERAGLSPSGLARRAGLDPTTFNKSKRITSDGRERWPSTESVAK
CEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH
ALAATGTAIDTFVQFIEDTERAAKAVPLLGFAEAGAGGYFDDGGFPVGKGWDEVGLPCVN
HHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCEEC
DEHAYALEISGDSMKPAYRDGDVIVVSPGTPIRRGDRVVVKTRDGEVMVKELKRRTARTI
CCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHEE
ELQSLNPSHANRTLPASEVEWIARIVWASQ
EEECCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA