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The map label for this gene is atpD [H]

Identifier: 75674631

GI number: 75674631

Start: 487981

End: 489411

Strand: Direct

Name: atpD [H]

Synonym: Nwi_0433

Alternate gene names: 75674631

Gene position: 487981-489411 (Clockwise)

Preceding gene: 75674630

Following gene: 75674632

Centisome position: 14.34

GC content: 63.66

Gene sequence:

>1431_bases
ATGGCTACAGCAGCCAATCAGGTCGGTCGTATTACCCAGGTCATCGGCGCCGTCGTCGACGTGCAGTTCGAAGGGCATCT
GCCGGCCATTCTGAACGCGATCGAGACCAAGAACGGCGAGAATCGGCTGGTTCTGGAAGTGGCGCAGCATCTTGGCGAAT
CCACCGTCCGGACCATCGCCATGGATACCACCGAAGGTCTGGTGCGCGGCCAGGACGTGACCGACACCGGTGCGCCGATC
CGGGTGCCGGTCGGTGCAGGCACGCTCGGCCGCATCATGAACGTGATCGGCGAGCCCGTGGACGAGCAGGGTCCGGTCAA
AGCCGACGATCTGCGCCCGATTCACGCGGAAGCGCCGTCCTATACCGACCAGTCGACCGAAGCGGAAATTCTCGTCACCG
GCATCAAGGTCGTGGATCTGCTGGCGCCTTACGCCAAGGGCGGCAAGATCGGGCTGTTCGGCGGCGCGGGCGTCGGCAAG
ACGGTGCTGATCCAGGAGCTGATCAACAACGTCGCCAAGGCGCATGGCGGTTATTCGGTGTTCGCCGGCGTCGGCGAACG
TACCCGCGAAGGCAATGACCTCTATCACGAATTCATCGAATCCGGCGTCAACAAGAAGGGCGGCGGCGAAGGCTCCAAAT
GCGCGCTGGTCTACGGCCAGATGAACGAGCCTCCCGGCGCGCGCGCCCGCGTGGCGCTGTCCGGCCTCACGGTCGCGGAA
CATTTTCGCGATCAGGGTCAGGACGTGCTGTTTTTCGTCGACAACATCTTCCGCTTCACGCAGGCGGGCTCGGAAGTGTC
GGCGCTGCTCGGCCGCATCCCCAGCGCCGTCGGATATCAGCCGACGCTCGCCACCGACATGGGCGCGCTGCAGGAACGCA
TTACCACCACCAACAAGGGCTCGATCACCTCGGTGCAGGCGATTTACGTTCCGGCGGACGATCTGACCGACCCGGCGCCG
GCAACCTCGTTTGCGCATCTCGACGCCACGACGGTGCTCAACCGCGCCATCTCGGAAAAGGGTATTTATCCGGCGGTGGA
CCCGCTCGACTCGACCTCGCGCATGCTGTCGCCGCTGATCGTCGGCGAGGAGCACTACCAGACCGCGCGCCTCGTGCAGC
AGGTTCTGCAACGCTACAAATCGCTTCAGGACATCATCGCCATTCTCGGCATGGACGAACTGTCTGAAGAGGACAAGCTC
ACCGTCGCGCGCGCCCGCAAGGTCGAGCGTTTCCTGTCGCAGCCGTTCCATGTCGCCGAAGTGTTCACCGGCTCGCCCGG
CAAGTTCGTCGATCTCGCCGACACCATCAAGGGGTTCCGCGACCTTTGCCAGGGCAAGTACGATCATCTGCCGGAAGCGG
CGTTCTACATGGTCGGCACCATCGAGGAAGCCGTCGAGAAGGGCAAGAAGCTCGCGGCTGAAGCGGCTTAA

Upstream 100 bases:

>100_bases
GACGCTCACACGATCTGCCCGTATTCCCGGGCCACGCGCAACAATGTGCCGGTGACGCTCAGCGTCCTCTGACACGCCTA
TTCGTTACAGGAGACTTTCT

Downstream 100 bases:

>100_bases
ATAATTGTCGTCATTGCCGGGCTTGACCTGGCAATCCATCGATAACATTTGCCGGATGACCCTGCGGCTTGAACCCGCGG
GAGGCAGCAGAGAGACGGGA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MATAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMDTTEGLVRGQDVTDTGAPI
RVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPSYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGK
TVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAE
HFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTNKGSITSVQAIYVPADDLTDPAP
ATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARLVQQVLQRYKSLQDIIAILGMDELSEEDKL
TVARARKVERFLSQPFHVAEVFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAVEKGKKLAAEAA

Sequences:

>Translated_476_residues
MATAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMDTTEGLVRGQDVTDTGAPI
RVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPSYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGK
TVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAE
HFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTNKGSITSVQAIYVPADDLTDPAP
ATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARLVQQVLQRYKSLQDIIAILGMDELSEEDKL
TVARARKVERFLSQPFHVAEVFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAVEKGKKLAAEAA
>Mature_475_residues
ATAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMDTTEGLVRGQDVTDTGAPIR
VPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPSYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT
VLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEH
FRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTNKGSITSVQAIYVPADDLTDPAPA
TSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARLVQQVLQRYKSLQDIIAILGMDELSEEDKLT
VARARKVERFLSQPFHVAEVFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAVEKGKKLAAEAA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=473, Percent_Identity=80.1268498942918, Blast_Score=752, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=302, Percent_Identity=27.8145695364238, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI19913426, Length=367, Percent_Identity=26.158038147139, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI19913428, Length=372, Percent_Identity=26.8817204301075, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI50345984, Length=297, Percent_Identity=26.2626262626263, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4757810, Length=297, Percent_Identity=26.2626262626263, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI1790170, Length=464, Percent_Identity=69.3965517241379, Blast_Score=655, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=405, Percent_Identity=28.641975308642, Blast_Score=131, Evalue=9e-32,
Organism=Escherichia coli, GI1790172, Length=325, Percent_Identity=26.1538461538462, Blast_Score=107, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI25144756, Length=474, Percent_Identity=75.3164556962025, Blast_Score=721, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17565854, Length=352, Percent_Identity=26.9886363636364, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17510931, Length=357, Percent_Identity=25.7703081232493, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17570191, Length=357, Percent_Identity=26.0504201680672, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71988080, Length=320, Percent_Identity=25.625, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71988063, Length=320, Percent_Identity=25.625, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71988074, Length=311, Percent_Identity=24.1157556270096, Blast_Score=79, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=470, Percent_Identity=75.1063829787234, Blast_Score=707, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=366, Percent_Identity=26.775956284153, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6319370, Length=359, Percent_Identity=25.9052924791086, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6320016, Length=253, Percent_Identity=25.296442687747, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24638766, Length=469, Percent_Identity=79.5309168443497, Blast_Score=742, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=467, Percent_Identity=70.0214132762313, Blast_Score=658, Evalue=0.0,
Organism=Drosophila melanogaster, GI24638768, Length=90, Percent_Identity=75.5555555555556, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI20129479, Length=322, Percent_Identity=27.3291925465839, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24583988, Length=330, Percent_Identity=26.6666666666667, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24583986, Length=330, Percent_Identity=26.6666666666667, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24583984, Length=330, Percent_Identity=26.6666666666667, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24583992, Length=302, Percent_Identity=27.8145695364238, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI281361666, Length=366, Percent_Identity=26.2295081967213, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646341, Length=366, Percent_Identity=26.2295081967213, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17136796, Length=366, Percent_Identity=26.2295081967213, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24658560, Length=320, Percent_Identity=24.6875, Blast_Score=90, Evalue=4e-18,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 50823; Mature: 50692

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIA
CCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHEE
MDTTEGLVRGQDVTDTGAPIRVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPS
ECCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
YTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSV
CCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEE
FAGVGERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAE
EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHH
HFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTNKG
HHHHCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCC
SITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLI
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VGEEHYQTARLVQQVLQRYKSLQDIIAILGMDELSEEDKLTVARARKVERFLSQPFHVAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEH
VFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAVEKGKKLAAEAA
HEECCCCCEEEHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIA
CCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHEE
MDTTEGLVRGQDVTDTGAPIRVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPS
ECCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
YTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSV
CCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEE
FAGVGERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAE
EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHH
HFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTNKG
HHHHCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCC
SITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLI
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VGEEHYQTARLVQQVLQRYKSLQDIIAILGMDELSEEDKLTVARARKVERFLSQPFHVAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEH
VFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAVEKGKKLAAEAA
HEECCCCCEEEHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA