| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674508
Identifier: 75674508
GI number: 75674508
Start: 349385
End: 350017
Strand: Direct
Name: 75674508
Synonym: Nwi_0310
Alternate gene names: NA
Gene position: 349385-350017 (Clockwise)
Preceding gene: 75674507
Following gene: 75674511
Centisome position: 10.27
GC content: 60.03
Gene sequence:
>633_bases GTGGGCGGACATTCCAGCGCGCTACGGCCCGCACACCACTTGCGTGAACCGCTTCAACCGGTGGCGCAAGGCAGGCGTGT GGGATCGCATTCTGTCGGCTGTTTCAAAGGCTTACGATGGCGACATCCAAATGATCGATTCGTCGTCGATCCGCGTGCAT CAACATGCGGCCAACGGTCAAAAAAACAGACGCGATCCCGTTGCATGGGTCGCTCGCGCGGCGGGCTGACCACCAAAATC CACGCGCTGGTGGATGCCTGCGGCCTGCCGATCGTCCTCAAGATCACCGAAGGCCAGGCCCATGACGGGCGTAGCGCGCA GGACATGATCGACACCGTCGAACGCGGCGACGTGCTGCTGGCCGACCGGGCCTACGACTCCAACGCCCTGCGTCAAACGC TGGCCGCGCGCGGCGCGAGAGCCAATGTGAAGCCGATGCCAAATCGCGTTGCGGCCTTGCAATTCAACAGACGGCTCTAT CGCAAGCGCAATCTGGTCGAACGCTTCTTCAACAAAATCAAGCACTATCGCGCCGTCGCCACCAGATATGACAAACGTGA CGACAACTTCCTCACCTCCATCAAGCTCGCCTCAATCCGCATCTGGTTGCGATTTAATGAGTCGATGACCTAG
Upstream 100 bases:
>100_bases TGATCCAGCCGCTGTTGCCGAACAAGTCGCGCGGCGTTGCACGGGTGGATGATCGGCGGGTGCTGAACGGGATTTTCTGG CGGCTGCGCACCGGTGCGCC
Downstream 100 bases:
>100_bases AATCCTTGCTTTACGCGCGACCGGCTTCCATCATTACGTTAAGCCCGAGGATATACTTCGCCGAAGAACGCTCCCGCAGG AGGGATTGAGGCGGCCGCCA
Product: transposase, IS4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGGHSSALRPAHHLREPLQPVAQGRRVGSHSVGCFKGLRWRHPNDRFVVDPRASTCGQRSKKQTRSRCMGRSRGGLTTKI HALVDACGLPIVLKITEGQAHDGRSAQDMIDTVERGDVLLADRAYDSNALRQTLAARGARANVKPMPNRVAALQFNRRLY RKRNLVERFFNKIKHYRAVATRYDKRDDNFLTSIKLASIRIWLRFNESMT
Sequences:
>Translated_210_residues MGGHSSALRPAHHLREPLQPVAQGRRVGSHSVGCFKGLRWRHPNDRFVVDPRASTCGQRSKKQTRSRCMGRSRGGLTTKI HALVDACGLPIVLKITEGQAHDGRSAQDMIDTVERGDVLLADRAYDSNALRQTLAARGARANVKPMPNRVAALQFNRRLY RKRNLVERFFNKIKHYRAVATRYDKRDDNFLTSIKLASIRIWLRFNESMT >Mature_209_residues GGHSSALRPAHHLREPLQPVAQGRRVGSHSVGCFKGLRWRHPNDRFVVDPRASTCGQRSKKQTRSRCMGRSRGGLTTKIH ALVDACGLPIVLKITEGQAHDGRSAQDMIDTVERGDVLLADRAYDSNALRQTLAARGARANVKPMPNRVAALQFNRRLYR KRNLVERFFNKIKHYRAVATRYDKRDDNFLTSIKLASIRIWLRFNESMT
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 23842; Mature: 23711
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGHSSALRPAHHLREPLQPVAQGRRVGSHSVGCFKGLRWRHPNDRFVVDPRASTCGQRS CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEECCCCHHHHHHH KKQTRSRCMGRSRGGLTTKIHALVDACGLPIVLKITEGQAHDGRSAQDMIDTVERGDVLL HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEE ADRAYDSNALRQTLAARGARANVKPMPNRVAALQFNRRLYRKRNLVERFFNKIKHYRAVA EECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRYDKRDDNFLTSIKLASIRIWLRFNESMT HHHCCCCCCHHHHEEEEEEEEEEEECCCCC >Mature Secondary Structure GGHSSALRPAHHLREPLQPVAQGRRVGSHSVGCFKGLRWRHPNDRFVVDPRASTCGQRS CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEECCCCHHHHHHH KKQTRSRCMGRSRGGLTTKIHALVDACGLPIVLKITEGQAHDGRSAQDMIDTVERGDVLL HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEE ADRAYDSNALRQTLAARGARANVKPMPNRVAALQFNRRLYRKRNLVERFFNKIKHYRAVA EECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRYDKRDDNFLTSIKLASIRIWLRFNESMT HHHCCCCCCHHHHEEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8126444 [H]