Click here to switch to the map view.

The map label for this gene is yejB [H]

Identifier: 75674488

GI number: 75674488

Start: 329155

End: 330264

Strand: Direct

Name: yejB [H]

Synonym: Nwi_0290

Alternate gene names: 75674488

Gene position: 329155-330264 (Clockwise)

Preceding gene: 75674487

Following gene: 75674489

Centisome position: 9.68

GC content: 58.92

Gene sequence:

>1110_bases
ATGAGCGCCTACATTGTCCGCCGCATTCTGCTGATGCTTCCCACATTGCTGGGCATTCTGTTCGTGTCGTTCGTCGTGGT
GCAATTCGCGCCCGGTGGTCCGGTCGAGCGGGTGATCGCGCAGTTGAGCGGCTCGGATACCGGCGGAATGTCGCGCATTT
CCGGCTCGTCCGGTGGCGACTTCGGCGCCCGCGGCCAGGTCGGCGCGTCGTCCGACGCCGTCAACTCAAAATATCGCGGC
GCGCAGGGGCTTGATCCGGCCTTCATCAAGAGCCTTGAGCAGCAGTTCGGCTTCGACAAGCCGGCGCATGAACGCTTTCT
GCTGATGGTGTGGAATTTCGCCCGCTTCGATTTCGGCAAGAGCTATTTCCGCGACACCACCGTGATCGAGCTGATCAAGG
AGAAGCTGCCGGTTTCGATGTCGCTAGGCATCTGGATGACGCTGCTGACCTATCTGATCTCGATTCCGCTTGGCATTCGC
AAGGCCGTCAAGGACGGATCGCAGTTCGACACCTGGACGTCGGCAGTCATCATCGTCGGTTTCGCGATTCCGGGATTTCT
GTTCGCGATCCTTCTCATCGTCCTGTTCGCGGGGGGATCGTTCTTCAGCATTTTCCCGTTGCGGGGCTTGACGTCGGACG
GCTGGAACGAGTTTCCGTGGTACTGGAAAATTCTCGATTATTTCTGGCACCTCACGCTGCCTTTGATCTCGATGGCGCTC
GGCGCCTTCGCCACCATGACCCTGCTGACCAAGAACTCGTTCCTTGACGAGATCCGCAAGCAGTATGTGATGACCGCGCG
CGCCAAGGGTTGCAGCGAGCGGCAGGTGCTCTACAATCACGTCTTCCGCAACGCCATGCTGATCGTCATCGCCGGATTTC
CCGGCGCGTTCGTTCATGCCTTCTTCTCCGGATCGCTGTTGATCGAAACCATCTTCTCGCTCGACGGGCTTGGCCTGCTC
GGGTTTGAGAGCGTGCTCAATCGCGACTACCCGGTTGTGTTCGGCACACTCTATATCTTCTCGCTGGTCGGGCTCGTGGT
GAACCTGATCTCTGATCTGACCTACATGTGGATCGATCCGCGAATCGATTTCGAGGCGCGGGAGGTCTGA

Upstream 100 bases:

>100_bases
CCCATCCGCCGAGCCTGCCGAAATACCTCGGCGTCATGGCGCCTGATATCTGGTGGTCGACACAGGCCCGGCCGGCATCA
TCCGGGCAGGCGGGATAAGC

Downstream 100 bases:

>100_bases
TGGCCATGACTTCGACCACGCCCGTCGAAGCTGGGGCAACATCGCCGCTTGGCGAGGCTGTGCCGCCGGCGCGCCATTCC
CTTGGCATGTCGCCGCTCAA

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSAYIVRRILLMLPTLLGILFVSFVVVQFAPGGPVERVIAQLSGSDTGGMSRISGSSGGDFGARGQVGASSDAVNSKYRG
AQGLDPAFIKSLEQQFGFDKPAHERFLLMVWNFARFDFGKSYFRDTTVIELIKEKLPVSMSLGIWMTLLTYLISIPLGIR
KAVKDGSQFDTWTSAVIIVGFAIPGFLFAILLIVLFAGGSFFSIFPLRGLTSDGWNEFPWYWKILDYFWHLTLPLISMAL
GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSERQVLYNHVFRNAMLIVIAGFPGAFVHAFFSGSLLIETIFSLDGLGLL
GFESVLNRDYPVVFGTLYIFSLVGLVVNLISDLTYMWIDPRIDFEAREV

Sequences:

>Translated_369_residues
MSAYIVRRILLMLPTLLGILFVSFVVVQFAPGGPVERVIAQLSGSDTGGMSRISGSSGGDFGARGQVGASSDAVNSKYRG
AQGLDPAFIKSLEQQFGFDKPAHERFLLMVWNFARFDFGKSYFRDTTVIELIKEKLPVSMSLGIWMTLLTYLISIPLGIR
KAVKDGSQFDTWTSAVIIVGFAIPGFLFAILLIVLFAGGSFFSIFPLRGLTSDGWNEFPWYWKILDYFWHLTLPLISMAL
GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSERQVLYNHVFRNAMLIVIAGFPGAFVHAFFSGSLLIETIFSLDGLGLL
GFESVLNRDYPVVFGTLYIFSLVGLVVNLISDLTYMWIDPRIDFEAREV
>Mature_368_residues
SAYIVRRILLMLPTLLGILFVSFVVVQFAPGGPVERVIAQLSGSDTGGMSRISGSSGGDFGARGQVGASSDAVNSKYRGA
QGLDPAFIKSLEQQFGFDKPAHERFLLMVWNFARFDFGKSYFRDTTVIELIKEKLPVSMSLGIWMTLLTYLISIPLGIRK
AVKDGSQFDTWTSAVIIVGFAIPGFLFAILLIVLFAGGSFFSIFPLRGLTSDGWNEFPWYWKILDYFWHLTLPLISMALG
AFATMTLLTKNSFLDEIRKQYVMTARAKGCSERQVLYNHVFRNAMLIVIAGFPGAFVHAFFSGSLLIETIFSLDGLGLLG
FESVLNRDYPVVFGTLYIFSLVGLVVNLISDLTYMWIDPRIDFEAREV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=367, Percent_Identity=58.58310626703, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1789965, Length=381, Percent_Identity=27.8215223097113, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1787497, Length=365, Percent_Identity=26.3013698630137, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787053, Length=367, Percent_Identity=27.2479564032698, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1789888, Length=362, Percent_Identity=25.6906077348066, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787761, Length=291, Percent_Identity=29.2096219931272, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787550, Length=253, Percent_Identity=25.6916996047431, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41051; Mature: 40919

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYIVRRILLMLPTLLGILFVSFVVVQFAPGGPVERVIAQLSGSDTGGMSRISGSSGGD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGARGQVGASSDAVNSKYRGAQGLDPAFIKSLEQQFGFDKPAHERFLLMVWNFARFDFGK
CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCH
SYFRDTTVIELIKEKLPVSMSLGIWMTLLTYLISIPLGIRKAVKDGSQFDTWTSAVIIVG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH
FAIPGFLFAILLIVLFAGGSFFSIFPLRGLTSDGWNEFPWYWKILDYFWHLTLPLISMAL
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSERQVLYNHVFRNAMLIVIAGFPGAFVHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCCHHHHHH
FFSGSLLIETIFSLDGLGLLGFESVLNRDYPVVFGTLYIFSLVGLVVNLISDLTYMWIDP
HHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
RIDFEAREV
CCCCCCCCC
>Mature Secondary Structure 
SAYIVRRILLMLPTLLGILFVSFVVVQFAPGGPVERVIAQLSGSDTGGMSRISGSSGGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGARGQVGASSDAVNSKYRGAQGLDPAFIKSLEQQFGFDKPAHERFLLMVWNFARFDFGK
CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCH
SYFRDTTVIELIKEKLPVSMSLGIWMTLLTYLISIPLGIRKAVKDGSQFDTWTSAVIIVG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH
FAIPGFLFAILLIVLFAGGSFFSIFPLRGLTSDGWNEFPWYWKILDYFWHLTLPLISMAL
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GAFATMTLLTKNSFLDEIRKQYVMTARAKGCSERQVLYNHVFRNAMLIVIAGFPGAFVHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCCHHHHHH
FFSGSLLIETIFSLDGLGLLGFESVLNRDYPVVFGTLYIFSLVGLVVNLISDLTYMWIDP
HHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
RIDFEAREV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]