| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74318775
Identifier: 74318775
GI number: 74318775
Start: 2835943
End: 2837271
Strand: Direct
Name: 74318775
Synonym: Tbd_2757
Alternate gene names: NA
Gene position: 2835943-2837271 (Clockwise)
Preceding gene: 74318774
Following gene: 74318785
Centisome position: 97.46
GC content: 67.12
Gene sequence:
>1329_bases GTGCATCAGAGCGAAGCGCTGCTGTTCTTCACCCTGCTTCAACTGACCGTAATCGTGCTCGCCGCGCGCGCCGGCGGCGC GCTCGCACGGCGCGTCGGCCAATCGCCGGCGGTCGGCGAAATCATCGTCGGCATCCTGCTCGGACCCTCGCTGTTCGGCT GGCTCGCGCCGGATCTCTTCCGCACCGTCTTTCAGGCGTCGTCGCCTGAGCCGATGCAGGTCGTGTCGCAGATCGGTCTG GTGCTGCTGATGTTCCAGATCGGCCTCGAATTCGATTTCGCGCATCTCGCCGCGCGCAACAACCGGCGCGCCGTGCGCTA CGTCGCGACGGCGAGCATGATCGCGCCCTTCGCGCTCGGCTTCGGTTTCGGCTACCTCAGCGCGCCGCTGCTGTCGCCGG GCGCCGACGTCCTCGGCTCGGCGCTGTTCGTCGGCACGGCATTTTCGATCACGGCGCTGCCGATCCTTGGCCGCATCATG ATCGAGCTCGAGATCACGCGGCACCCGCTCGCGGTGATCGCGATCAGCGCGGCGGCGATCAACGACGTCGTCGGCTGGCT GCTGCTCGCCTTGGTCACCGCACTGACGCTCGCGCAGTTCAGCGCGGCGGGCTTCGCCCTCAAGCTGCTGCTCGTCGTCG GCTTCTTCGCCTGCTGGTGGTTCGTCGTCCGCCCGCTCATGAAACGCGTGATCCACGCGAGCCAGCGGGCGTCGGCAACG GTCAGCAAGGATAAAGGGCGCGACGGACTCAGCCACAATCTGCTGGGGGTCCTGTTCGCGGCGATCTTCCTGTCGGCGAT CGCGACCTACCAGCTCGGCATTTTCGCGATCTTCGGCGGTTTCATGATGGGCGTCGTGCTCCACGACGAGCATGAACTCA TCGCGGCGTGGCGCGAGCGCGTCGGCCATTTCGTGACGGTGTTCTTCCTGCCGGTGTTCTTCACCTACACCGGGCTGCGC ACCGACATCGTCGGCCTCGATTCGGCCGAAGCCTGGGGCTGGTGCGCGCTGCTGATCGCGCTCGCCAGCCTCGGCAAGTT CGGCGCGAGCTATCTCGCCGCGCGCTGGGCGGGCCTGTCGCGCGACGAGAGCAAGGTGATCGGCATCATGATGAACACGC GGGCGCTGATGGAGCTCATCGTCATCAACGTCGGCTACGACCTCGGCGTGATTTCGCAGCAGCTCTTCACGATGCTCGTG CTGATGGCGATCTTCAGCACCGTCATCACGATGCCCGGCCTGCGGCGCTGGTTGCCGCGCATTGGCGTCGGCCTGCCCGC CGGCGCGTCGCCGCTGCCGCAGGCGGCCGCCCAGTCTTCGACGTCCTGA
Upstream 100 bases:
>100_bases CCGTCGCATTCCTCGCCTCGGACCAGGCGAGCTACATCAGCGGGCAGGTGCTGTCGGTCAACGGAGGCATGATCTGAACG ACGCCACCCGCGCGCTCGCC
Downstream 100 bases:
>100_bases GCGCCGGCGGCCGGTTCAACCCGGCTTCACCGCCTGATATTCGGCGAGTATGGAAAGCGCGCGCGTCTCGACGTGCCGGC GCACGGCGAGGAAACCCGCG
Product: sodium/hydrogen exchanger family protein
Products: NA
Alternate protein names: MjNapA [H]
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MHQSEALLFFTLLQLTVIVLAARAGGALARRVGQSPAVGEIIVGILLGPSLFGWLAPDLFRTVFQASSPEPMQVVSQIGL VLLMFQIGLEFDFAHLAARNNRRAVRYVATASMIAPFALGFGFGYLSAPLLSPGADVLGSALFVGTAFSITALPILGRIM IELEITRHPLAVIAISAAAINDVVGWLLLALVTALTLAQFSAAGFALKLLLVVGFFACWWFVVRPLMKRVIHASQRASAT VSKDKGRDGLSHNLLGVLFAAIFLSAIATYQLGIFAIFGGFMMGVVLHDEHELIAAWRERVGHFVTVFFLPVFFTYTGLR TDIVGLDSAEAWGWCALLIALASLGKFGASYLAARWAGLSRDESKVIGIMMNTRALMELIVINVGYDLGVISQQLFTMLV LMAIFSTVITMPGLRRWLPRIGVGLPAGASPLPQAAAQSSTS
Sequences:
>Translated_442_residues MHQSEALLFFTLLQLTVIVLAARAGGALARRVGQSPAVGEIIVGILLGPSLFGWLAPDLFRTVFQASSPEPMQVVSQIGL VLLMFQIGLEFDFAHLAARNNRRAVRYVATASMIAPFALGFGFGYLSAPLLSPGADVLGSALFVGTAFSITALPILGRIM IELEITRHPLAVIAISAAAINDVVGWLLLALVTALTLAQFSAAGFALKLLLVVGFFACWWFVVRPLMKRVIHASQRASAT VSKDKGRDGLSHNLLGVLFAAIFLSAIATYQLGIFAIFGGFMMGVVLHDEHELIAAWRERVGHFVTVFFLPVFFTYTGLR TDIVGLDSAEAWGWCALLIALASLGKFGASYLAARWAGLSRDESKVIGIMMNTRALMELIVINVGYDLGVISQQLFTMLV LMAIFSTVITMPGLRRWLPRIGVGLPAGASPLPQAAAQSSTS >Mature_442_residues MHQSEALLFFTLLQLTVIVLAARAGGALARRVGQSPAVGEIIVGILLGPSLFGWLAPDLFRTVFQASSPEPMQVVSQIGL VLLMFQIGLEFDFAHLAARNNRRAVRYVATASMIAPFALGFGFGYLSAPLLSPGADVLGSALFVGTAFSITALPILGRIM IELEITRHPLAVIAISAAAINDVVGWLLLALVTALTLAQFSAAGFALKLLLVVGFFACWWFVVRPLMKRVIHASQRASAT VSKDKGRDGLSHNLLGVLFAAIFLSAIATYQLGIFAIFGGFMMGVVLHDEHELIAAWRERVGHFVTVFFLPVFFTYTGLR TDIVGLDSAEAWGWCALLIALASLGKFGASYLAARWAGLSRDESKVIGIMMNTRALMELIVINVGYDLGVISQQLFTMLV LMAIFSTVITMPGLRRWLPRIGVGLPAGASPLPQAAAQSSTS
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=424, Percent_Identity=29.2452830188679, Blast_Score=181, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 47407; Mature: 47407
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQSEALLFFTLLQLTVIVLAARAGGALARRVGQSPAVGEIIVGILLGPSLFGWLAPDLF CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTVFQASSPEPMQVVSQIGLVLLMFQIGLEFDFAHLAARNNRRAVRYVATASMIAPFALG HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FGFGYLSAPLLSPGADVLGSALFVGTAFSITALPILGRIMIELEITRHPLAVIAISAAAI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH NDVVGWLLLALVTALTLAQFSAAGFALKLLLVVGFFACWWFVVRPLMKRVIHASQRASAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VSKDKGRDGLSHNLLGVLFAAIFLSAIATYQLGIFAIFGGFMMGVVLHDEHELIAAWRER CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VGHFVTVFFLPVFFTYTGLRTDIVGLDSAEAWGWCALLIALASLGKFGASYLAARWAGLS HHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RDESKVIGIMMNTRALMELIVINVGYDLGVISQQLFTMLVLMAIFSTVITMPGLRRWLPR CCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IGVGLPAGASPLPQAAAQSSTS HCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MHQSEALLFFTLLQLTVIVLAARAGGALARRVGQSPAVGEIIVGILLGPSLFGWLAPDLF CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTVFQASSPEPMQVVSQIGLVLLMFQIGLEFDFAHLAARNNRRAVRYVATASMIAPFALG HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FGFGYLSAPLLSPGADVLGSALFVGTAFSITALPILGRIMIELEITRHPLAVIAISAAAI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH NDVVGWLLLALVTALTLAQFSAAGFALKLLLVVGFFACWWFVVRPLMKRVIHASQRASAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VSKDKGRDGLSHNLLGVLFAAIFLSAIATYQLGIFAIFGGFMMGVVLHDEHELIAAWRER CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VGHFVTVFFLPVFFTYTGLRTDIVGLDSAEAWGWCALLIALASLGKFGASYLAARWAGLS HHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RDESKVIGIMMNTRALMELIVINVGYDLGVISQQLFTMLVLMAIFSTVITMPGLRRWLPR CCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IGVGLPAGASPLPQAAAQSSTS HCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]