| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318772
Identifier: 74318772
GI number: 74318772
Start: 2833930
End: 2834739
Strand: Direct
Name: 74318772
Synonym: Tbd_2754
Alternate gene names: NA
Gene position: 2833930-2834739 (Clockwise)
Preceding gene: 74318771
Following gene: 74318773
Centisome position: 97.39
GC content: 73.09
Gene sequence:
>810_bases ATGGCGGCGAGACTCAGCGTCTGGATCGAGGGCGTCGGCCTGCTCGGCCCCGGATTCGAGGACTGGGCCGGCGCACTGCC GGTTCTCGACGGGTCCTCGCCGTATGTCGCGCGCCCATTGAGCGCGCCTGTGCCGGCGTCCCTGCCGCCCGCCGAGCGCC GGCGTGTCGGCTTGAGCGTCAAGGTCGCGCTTGGCGTCGCCCACGCCGCGCTCGCCGCGGCCGACACGCCCGCCGCAGCA GTCGCAAGCGTATTCACCTCGTCGGGGGCCGACGGCGACAACTGCGACGCGATCTGCCAAGTCCTTGCCTCCGACGACCG GCACATTTCGCCGACCCGTTTCCACAATTCGGTCCACAACGCAGCGGCGGGCTACTGGGGCATCGCCTCGGGCGCGATGA CACCGGCGTCGGTGCTCTGTGCCTACGACGCGAGCTTCGGCGCGGGCCTCATCGAGGCGCTCACGCTCGTCGCGAACGAC GGCGCCGGCGTGCTGCTCGTCGCCTACGACGCGCCCTATCCCGAGCCGCTCAACGCCGCACGGCCGCTCCCTGCTGCCTT CGGCGTCGCACTCGCGCTCGCGCCGCAGCCCAGCGAACGTTCGCTCGCGCGGATCGAACTCGAACTGACCGACGCGCCCG CCGACATGCTGGCCGATCCCGCGCTCGAGGCGCTGCGCCGCGCGATCCCGGCCGCGCGCAGCCTGCCGCTGCTGCAAGCG CTCGCGGCGCGCCGGCGTGCCCGCGTCGTGCTCGACTATCTCGCGCCCCTAAGCCTCGCGCTTTCGCTCGAACCGGGGCC GCGCGCTTGA
Upstream 100 bases:
>100_bases CTGCGCACCAACACCGACGTCGCCCCGCGCCGCGTGCTGAGCAATTCCTTCGGCTTCGGCGGCACCAATTGCAGCCTCGT TCTGGGGCGGGCAGGCTGAG
Downstream 100 bases:
>100_bases GCACGGCAGACGACACGGTCCTCGACCGCGGCTGGTTGCTGGCGCATATCCCGCACCAGGGCAGCATGTGTCTGCTCGAG CGCATCGACGCCTGGGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MAARLSVWIEGVGLLGPGFEDWAGALPVLDGSSPYVARPLSAPVPASLPPAERRRVGLSVKVALGVAHAALAAADTPAAA VASVFTSSGADGDNCDAICQVLASDDRHISPTRFHNSVHNAAAGYWGIASGAMTPASVLCAYDASFGAGLIEALTLVAND GAGVLLVAYDAPYPEPLNAARPLPAAFGVALALAPQPSERSLARIELELTDAPADMLADPALEALRRAIPAARSLPLLQA LAARRRARVVLDYLAPLSLALSLEPGPRA
Sequences:
>Translated_269_residues MAARLSVWIEGVGLLGPGFEDWAGALPVLDGSSPYVARPLSAPVPASLPPAERRRVGLSVKVALGVAHAALAAADTPAAA VASVFTSSGADGDNCDAICQVLASDDRHISPTRFHNSVHNAAAGYWGIASGAMTPASVLCAYDASFGAGLIEALTLVAND GAGVLLVAYDAPYPEPLNAARPLPAAFGVALALAPQPSERSLARIELELTDAPADMLADPALEALRRAIPAARSLPLLQA LAARRRARVVLDYLAPLSLALSLEPGPRA >Mature_268_residues AARLSVWIEGVGLLGPGFEDWAGALPVLDGSSPYVARPLSAPVPASLPPAERRRVGLSVKVALGVAHAALAAADTPAAAV ASVFTSSGADGDNCDAICQVLASDDRHISPTRFHNSVHNAAAGYWGIASGAMTPASVLCAYDASFGAGLIEALTLVANDG AGVLLVAYDAPYPEPLNAARPLPAAFGVALALAPQPSERSLARIELELTDAPADMLADPALEALRRAIPAARSLPLLQAL AARRRARVVLDYLAPLSLALSLEPGPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27471; Mature: 27339
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARLSVWIEGVGLLGPGFEDWAGALPVLDGSSPYVARPLSAPVPASLPPAERRRVGLSV CCCEEEEEEEEECCCCCCHHHHCCCCCEECCCCCCEECCCCCCCCCCCCCHHHHHCCCEE KVALGVAHAALAAADTPAAAVASVFTSSGADGDNCDAICQVLASDDRHISPTRFHNSVHN EEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH AAAGYWGIASGAMTPASVLCAYDASFGAGLIEALTLVANDGAGVLLVAYDAPYPEPLNAA HHCCCCCCCCCCCCHHHHEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC RPLPAAFGVALALAPQPSERSLARIELELTDAPADMLADPALEALRRAIPAARSLPLLQA CCCCHHHHHEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCHHHHH LAARRRARVVLDYLAPLSLALSLEPGPRA HHHHHHHHHHHHHHHHHHEEEECCCCCCC >Mature Secondary Structure AARLSVWIEGVGLLGPGFEDWAGALPVLDGSSPYVARPLSAPVPASLPPAERRRVGLSV CCEEEEEEEEECCCCCCHHHHCCCCCEECCCCCCEECCCCCCCCCCCCCHHHHHCCCEE KVALGVAHAALAAADTPAAAVASVFTSSGADGDNCDAICQVLASDDRHISPTRFHNSVHN EEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH AAAGYWGIASGAMTPASVLCAYDASFGAGLIEALTLVANDGAGVLLVAYDAPYPEPLNAA HHCCCCCCCCCCCCHHHHEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC RPLPAAFGVALALAPQPSERSLARIELELTDAPADMLADPALEALRRAIPAARSLPLLQA CCCCHHHHHEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCHHHHH LAARRRARVVLDYLAPLSLALSLEPGPRA HHHHHHHHHHHHHHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA