Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yhjQ [H]

Identifier: 74318760

GI number: 74318760

Start: 2823623

End: 2823949

Strand: Direct

Name: yhjQ [H]

Synonym: Tbd_2742

Alternate gene names: 74318760

Gene position: 2823623-2823949 (Clockwise)

Preceding gene: 74318749

Following gene: 74318761

Centisome position: 97.04

GC content: 69.42

Gene sequence:

>327_bases
ATGCATACCGAGTTTGCAAGCTGTATCAAGGCCTGTGACGAATGCGCCGCCGCCTGCGACCACTGCGCGACGGCCTGCCT
CCAGGAAGCCGACCCCAAACCGATGGCGCGCTGCATCGCGCTCGACATCGACTGCGCCGCGATCTGCCGGCTCGCGTCGG
GCTACATGGCGCGCGGCAGCGAATTCGCCCGCCGCATGTGCGCGATCTGCGCCGAGGTCTGCGAGGCCTGCGGCGCCGAA
TGCGCGAAGCATCAGCACGACCATTGCCAGGAATGCGCGCAGGCCTGCCGGCGCTGCGCCGAGGAGTGCCGCCGGATGGC
CGCCTAG

Upstream 100 bases:

>100_bases
TCGCGGCGAAAGGCGGTCGGTTCGTTGATGCGGCGCGACGAGCCGGAACGCGATTTGCGGTGCGGAAACTCGGCGTCTCG
CCGAGCCTCAGGGGAATCCC

Downstream 100 bases:

>100_bases
GCTGTCGGAAGCGGGCCCCGCAGGTCGCTCGCTTGCCGCGAGCGCGGCCTCCCCCTACCATGGCGCCCTCAAGGGAGGTA
AACCATGAAAAAAATCGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGSEFARRMCAICAEVCEACGAE
CAKHQHDHCQECAQACRRCAEECRRMAA

Sequences:

>Translated_108_residues
MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGSEFARRMCAICAEVCEACGAE
CAKHQHDHCQECAQACRRCAEECRRMAA
>Mature_108_residues
MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGSEFARRMCAICAEVCEACGAE
CAKHQHDHCQECAQACRRCAEECRRMAA

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005560 [H]

Pfam domain/function: PF03860 DUF326 [H]

EC number: NA

Molecular weight: Translated: 11671; Mature: 11671

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00281 BOWMAN_BIRK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

17.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
22.2 %Cys+Met (Translated Protein)
17.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
22.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EFARRMCAICAEVCEACGAECAKHQHDHCQECAQACRRCAEECRRMAA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EFARRMCAICAEVCEACGAECAKHQHDHCQECAQACRRCAEECRRMAA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]