| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yhjQ [H]
Identifier: 74318760
GI number: 74318760
Start: 2823623
End: 2823949
Strand: Direct
Name: yhjQ [H]
Synonym: Tbd_2742
Alternate gene names: 74318760
Gene position: 2823623-2823949 (Clockwise)
Preceding gene: 74318749
Following gene: 74318761
Centisome position: 97.04
GC content: 69.42
Gene sequence:
>327_bases ATGCATACCGAGTTTGCAAGCTGTATCAAGGCCTGTGACGAATGCGCCGCCGCCTGCGACCACTGCGCGACGGCCTGCCT CCAGGAAGCCGACCCCAAACCGATGGCGCGCTGCATCGCGCTCGACATCGACTGCGCCGCGATCTGCCGGCTCGCGTCGG GCTACATGGCGCGCGGCAGCGAATTCGCCCGCCGCATGTGCGCGATCTGCGCCGAGGTCTGCGAGGCCTGCGGCGCCGAA TGCGCGAAGCATCAGCACGACCATTGCCAGGAATGCGCGCAGGCCTGCCGGCGCTGCGCCGAGGAGTGCCGCCGGATGGC CGCCTAG
Upstream 100 bases:
>100_bases TCGCGGCGAAAGGCGGTCGGTTCGTTGATGCGGCGCGACGAGCCGGAACGCGATTTGCGGTGCGGAAACTCGGCGTCTCG CCGAGCCTCAGGGGAATCCC
Downstream 100 bases:
>100_bases GCTGTCGGAAGCGGGCCCCGCAGGTCGCTCGCTTGCCGCGAGCGCGGCCTCCCCCTACCATGGCGCCCTCAAGGGAGGTA AACCATGAAAAAAATCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGSEFARRMCAICAEVCEACGAE CAKHQHDHCQECAQACRRCAEECRRMAA
Sequences:
>Translated_108_residues MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGSEFARRMCAICAEVCEACGAE CAKHQHDHCQECAQACRRCAEECRRMAA >Mature_108_residues MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGSEFARRMCAICAEVCEACGAE CAKHQHDHCQECAQACRRCAEECRRMAA
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005560 [H]
Pfam domain/function: PF03860 DUF326 [H]
EC number: NA
Molecular weight: Translated: 11671; Mature: 11671
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00281 BOWMAN_BIRK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
17.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 22.2 %Cys+Met (Translated Protein) 17.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 22.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH EFARRMCAICAEVCEACGAECAKHQHDHCQECAQACRRCAEECRRMAA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHTEFASCIKACDECAAACDHCATACLQEADPKPMARCIALDIDCAAICRLASGYMARGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH EFARRMCAICAEVCEACGAECAKHQHDHCQECAQACRRCAEECRRMAA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]