| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318699
Identifier: 74318699
GI number: 74318699
Start: 2756352
End: 2758256
Strand: Direct
Name: 74318699
Synonym: Tbd_2681
Alternate gene names: NA
Gene position: 2756352-2758256 (Clockwise)
Preceding gene: 74318698
Following gene: 74318700
Centisome position: 94.73
GC content: 64.46
Gene sequence:
>1905_bases ATGACAGCTGTCGAGCTGCTCGAAAGCCTCAATCTACTCGACGAGCACGAGCGCATCGAGGCCAAGCGGGCCTCCGAGGC AGGCAAGTCGGTGCTGGAAACCGTCTGCGCCTTCGCCAACGAGCCGGGACTGGGTGGCGGCTGGATCGCGCTAGGAATCG TGCGCGAAGAGATGGCGCTTTTCCCGGCCTATGAGGTCGAGGGGATCACCCACCCCGACAAACTCTCGGCGGACATCGCC AACCAATGTCGCGATATGTTCAACATCCCGTTACGAGTGGATATCGCGACCGAAAACGTACACGGCAAGAACGTCGTCGT GGTCTTTGTCCCCGAGGCACAGCCGCAGGACAAGCCGATCTTCTTCAAGGCGCAGGGACTGCCGCGTGGCGCATTCCGGC GCATCGGTAGCACCGATCAGCGCTGCACCGACGACGACATGGCCGTGTTCTACCAGGGGCGTCAGCAGGAAAGCTTCGAC GCCGGCATCGTTGCCGATGCCACGCAGGATGATCTTTCGCCCGAGGCCATTGCCGATTACCGAAAATCTCGTGGCGATGC CAACCCGGATGCCGAAGAGTTGCGCTGGTCCGACGAGGAACTACTGCAGGCGCTCGGCAGCATGCGCCGCGACCAAAAGG GCGAATGGAAACCGACCGTTGCCGGCCTGATCCTGTTCGGCAAGCCCTCGGCCCTCCGCCGCTGCTTCCCCATGACCCGC GTCGATTACATCCGCGTGCCGGGCCGTGAATGGGTACCCGACCCCGACCGGCGTTTCGATACCGTCGAGTTGCGCGACCC GCTGTTCCGCCTGATCCGCCGTGCCCAGGCCGCCGTGCTTGACGACTTGCCCAAGAGCTTCGGTCTGACCGAAGGCGAAC TCCAGCGGCAGGACAAACCGGTGATTCCCCTGCGCGTCATCCGCGAAGCCCTGGTCAATGCCCTTATGCACCGCAGCTAC CGCAGCCACAGCCCGGTGCAGATCATCCGCTACGCCAACCGGCTGGAAATCCGCAACCCCGGCTTCTCCCTCAAATCGCC CGAGCATCTGGGCGAGCCGGGCTCCCAGCCGCGCAATCCCAAGATTGCCGCCGTGCTGCACGAGACCCGCTTCGCCGAAA CCAAGGGCAGCGGCATCCGGGTGATGCGCGAGAGCATGGAACAAGCGGGCCTTACTCCGCCGCTGTTCGAGTCCGACCGG GGGGCTGACCAGTTTGTCGCCCGTTACTTCTTCCATCACTTCCTCGGCGAGGATGACATCGCCTGGCTCGCCCAATTCCG CGACCTGCATCTCTCCGACGAGGAGGCCAAGGCGCTGATCGTCGTCCGCGAGGCGGGTGCCATCGACAACGCCACCTACC GGGAACTGAACAAGGTGGATGCCCTTGCGGCCAGCGGGGCCTTGCGCAGGCTGCGCGACGCCGGCCTGCTGGCCCAAAAG GGTCGAGGTTCCGCCACTTATTACGTGCCGACCGACCGCCTTGGGGCCGACGGAGATGGCTTACCGACCAAGTCGGATGC GTTGTCTACCAACCCCGAGGGCTTACCTACCAACCCGGAAGCACTATCTGACAACCCCGAGGACTTGCCGACCAACCCCA CCCCCGAGGAGGAAACCGCACGCCGGGCGCTCTTGGCCGAGTTGCCGGGCGACTTGGCGGCGCGCGTCGGCGCCCTGGGG CGCCGCAGCACCCCCGAGGAAGCTCAGGTCGTAGTCGTCGAGGTCAGCCGCCTGCGAGCGTGGCGGGCGGAAGAACTGGC CTTGCTACTGCATCGGAATTCTCGTCATGTGCGCAATACCTATCTGCGGCCCTTGATGCGGGACGGGCGATTGGTGATGA CCAATCCGGATGAGCCCAACGATCCGCAGCAGGCATATCGGGCAGCGGAGGTTCCCAGTGAATAG
Upstream 100 bases:
>100_bases TCACCCTGCCGCGTCCGCTGGCCGAGATCGATGCCGACCTGAAGCGCGCCGAAGAAGAAATCGTGAGGCTGCTGCGCGAA GTGACAGCGGAGTCGCGGGC
Downstream 100 bases:
>100_bases TCAATCGCTGAGTGCTCCCATAAGCTGGCGCCGGATGAAGCTGAAGTACCTGGTTGCATTGAAAAGTGGAGAGGCCATTC CGGGAGAGTCAATCAAAGAG
Product: transcriptional regulator
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase; Divergent AAA Domain Protein; AAA-4 Family Protein; ATP-Dependent DNA Helicase RecG-Related Protein; Divergent AAA Domain Family Protein; ATP-Dependent DNA Helicase RecG; Divergent AAA Domain-Containing Protein; Transcriptional Regulator With HTH Domain; Divergent AAA ATP; ATPase; Transcription Regulator HTH/DeoR Family; Divergent AAA Domain Family
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MTAVELLESLNLLDEHERIEAKRASEAGKSVLETVCAFANEPGLGGGWIALGIVREEMALFPAYEVEGITHPDKLSADIA NQCRDMFNIPLRVDIATENVHGKNVVVVFVPEAQPQDKPIFFKAQGLPRGAFRRIGSTDQRCTDDDMAVFYQGRQQESFD AGIVADATQDDLSPEAIADYRKSRGDANPDAEELRWSDEELLQALGSMRRDQKGEWKPTVAGLILFGKPSALRRCFPMTR VDYIRVPGREWVPDPDRRFDTVELRDPLFRLIRRAQAAVLDDLPKSFGLTEGELQRQDKPVIPLRVIREALVNALMHRSY RSHSPVQIIRYANRLEIRNPGFSLKSPEHLGEPGSQPRNPKIAAVLHETRFAETKGSGIRVMRESMEQAGLTPPLFESDR GADQFVARYFFHHFLGEDDIAWLAQFRDLHLSDEEAKALIVVREAGAIDNATYRELNKVDALAASGALRRLRDAGLLAQK GRGSATYYVPTDRLGADGDGLPTKSDALSTNPEGLPTNPEALSDNPEDLPTNPTPEEETARRALLAELPGDLAARVGALG RRSTPEEAQVVVVEVSRLRAWRAEELALLLHRNSRHVRNTYLRPLMRDGRLVMTNPDEPNDPQQAYRAAEVPSE
Sequences:
>Translated_634_residues MTAVELLESLNLLDEHERIEAKRASEAGKSVLETVCAFANEPGLGGGWIALGIVREEMALFPAYEVEGITHPDKLSADIA NQCRDMFNIPLRVDIATENVHGKNVVVVFVPEAQPQDKPIFFKAQGLPRGAFRRIGSTDQRCTDDDMAVFYQGRQQESFD AGIVADATQDDLSPEAIADYRKSRGDANPDAEELRWSDEELLQALGSMRRDQKGEWKPTVAGLILFGKPSALRRCFPMTR VDYIRVPGREWVPDPDRRFDTVELRDPLFRLIRRAQAAVLDDLPKSFGLTEGELQRQDKPVIPLRVIREALVNALMHRSY RSHSPVQIIRYANRLEIRNPGFSLKSPEHLGEPGSQPRNPKIAAVLHETRFAETKGSGIRVMRESMEQAGLTPPLFESDR GADQFVARYFFHHFLGEDDIAWLAQFRDLHLSDEEAKALIVVREAGAIDNATYRELNKVDALAASGALRRLRDAGLLAQK GRGSATYYVPTDRLGADGDGLPTKSDALSTNPEGLPTNPEALSDNPEDLPTNPTPEEETARRALLAELPGDLAARVGALG RRSTPEEAQVVVVEVSRLRAWRAEELALLLHRNSRHVRNTYLRPLMRDGRLVMTNPDEPNDPQQAYRAAEVPSE >Mature_633_residues TAVELLESLNLLDEHERIEAKRASEAGKSVLETVCAFANEPGLGGGWIALGIVREEMALFPAYEVEGITHPDKLSADIAN QCRDMFNIPLRVDIATENVHGKNVVVVFVPEAQPQDKPIFFKAQGLPRGAFRRIGSTDQRCTDDDMAVFYQGRQQESFDA GIVADATQDDLSPEAIADYRKSRGDANPDAEELRWSDEELLQALGSMRRDQKGEWKPTVAGLILFGKPSALRRCFPMTRV DYIRVPGREWVPDPDRRFDTVELRDPLFRLIRRAQAAVLDDLPKSFGLTEGELQRQDKPVIPLRVIREALVNALMHRSYR SHSPVQIIRYANRLEIRNPGFSLKSPEHLGEPGSQPRNPKIAAVLHETRFAETKGSGIRVMRESMEQAGLTPPLFESDRG ADQFVARYFFHHFLGEDDIAWLAQFRDLHLSDEEAKALIVVREAGAIDNATYRELNKVDALAASGALRRLRDAGLLAQKG RGSATYYVPTDRLGADGDGLPTKSDALSTNPEGLPTNPEALSDNPEDLPTNPTPEEETARRALLAELPGDLAARVGALGR RSTPEEAQVVVVEVSRLRAWRAEELALLLHRNSRHVRNTYLRPLMRDGRLVMTNPDEPNDPQQAYRAAEVPSE
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70699; Mature: 70567
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVELLESLNLLDEHERIEAKRASEAGKSVLETVCAFANEPGLGGGWIALGIVREEMAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FPAYEVEGITHPDKLSADIANQCRDMFNIPLRVDIATENVHGKNVVVVFVPEAQPQDKPI CCCHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCE FFKAQGLPRGAFRRIGSTDQRCTDDDMAVFYQGRQQESFDAGIVADATQDDLSPEAIADY EEEECCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHH RKSRGDANPDAEELRWSDEELLQALGSMRRDQKGEWKPTVAGLILFGKPSALRRCFPMTR HHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHCCCCC VDYIRVPGREWVPDPDRRFDTVELRDPLFRLIRRAQAAVLDDLPKSFGLTEGELQRQDKP CCEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC VIPLRVIREALVNALMHRSYRSHSPVQIIRYANRLEIRNPGFSLKSPEHLGEPGSQPRNP CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCHHCCCCCCCCCCC KIAAVLHETRFAETKGSGIRVMRESMEQAGLTPPLFESDRGADQFVARYFFHHFLGEDDI CEEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH AWLAQFRDLHLSDEEAKALIVVREAGAIDNATYRELNKVDALAASGALRRLRDAGLLAQK HHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC GRGSATYYVPTDRLGADGDGLPTKSDALSTNPEGLPTNPEALSDNPEDLPTNPTPEEETA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHH RRALLAELPGDLAARVGALGRRSTPEEAQVVVVEVSRLRAWRAEELALLLHRNSRHVRNT HHHHHHHCCHHHHHHHHHCCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHH YLRPLMRDGRLVMTNPDEPNDPQQAYRAAEVPSE HHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure TAVELLESLNLLDEHERIEAKRASEAGKSVLETVCAFANEPGLGGGWIALGIVREEMAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FPAYEVEGITHPDKLSADIANQCRDMFNIPLRVDIATENVHGKNVVVVFVPEAQPQDKPI CCCHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCE FFKAQGLPRGAFRRIGSTDQRCTDDDMAVFYQGRQQESFDAGIVADATQDDLSPEAIADY EEEECCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHH RKSRGDANPDAEELRWSDEELLQALGSMRRDQKGEWKPTVAGLILFGKPSALRRCFPMTR HHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHCCCCC VDYIRVPGREWVPDPDRRFDTVELRDPLFRLIRRAQAAVLDDLPKSFGLTEGELQRQDKP CCEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC VIPLRVIREALVNALMHRSYRSHSPVQIIRYANRLEIRNPGFSLKSPEHLGEPGSQPRNP CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCHHCCCCCCCCCCC KIAAVLHETRFAETKGSGIRVMRESMEQAGLTPPLFESDRGADQFVARYFFHHFLGEDDI CEEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH AWLAQFRDLHLSDEEAKALIVVREAGAIDNATYRELNKVDALAASGALRRLRDAGLLAQK HHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC GRGSATYYVPTDRLGADGDGLPTKSDALSTNPEGLPTNPEALSDNPEDLPTNPTPEEETA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHH RRALLAELPGDLAARVGALGRRSTPEEAQVVVVEVSRLRAWRAEELALLLHRNSRHVRNT HHHHHHHCCHHHHHHHHHCCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHH YLRPLMRDGRLVMTNPDEPNDPQQAYRAAEVPSE HHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA