| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318631
Identifier: 74318631
GI number: 74318631
Start: 2686959
End: 2688044
Strand: Direct
Name: 74318631
Synonym: Tbd_2613
Alternate gene names: NA
Gene position: 2686959-2688044 (Clockwise)
Preceding gene: 74318630
Following gene: 74318632
Centisome position: 92.34
GC content: 63.08
Gene sequence:
>1086_bases ATGGAACTGATCAACTTCATAGAAATCACCCCGCTGACCGCAATCCTGCTGATCCTGGTCGGCTTCGTCGGCGGCATGGT GTCGGGCTTCATCGGCTCGGGCGGCGCCTTCGTGCTCACCCCGGCGATGATGACGCTCGGCGCACCCGGCATCGTCGCCG TCGCATCGAACATCTGTCACAAGTTTCCGAAAGCGCTCGTCGGCGCGGTCAAGCGCAACAAGTACGGCCAGGTCGACATC AAACTCGGCCTAATCCTGGGTCTCTTCGCCGAAGCCGGCGTGCTGTTCGGCAAAGGCGTGATGACCGACATCAAGAACAC CTTCGGCGCCGTCGGCACCGACCTCTATGTGTCGGGGATGTTCGTCGTCACGCTGGCGATCGTCGGCGGCTTCGTGTTCA AGGACTACCGCAAACTCAAGGCCCTCGACGACGCGGGGCAAGGCGAGGAAGCGGCGCCGCTCACCCGTCTGGCGCGCTGG GTGCAGTCGGTGCGGATTCCCGGCACGATGATCTATTCCCGCGGCGCGCAAGCCGAGATTTCGATCCTGTTCCTGATTCC GATCGGTTTCGCGACTGGCTTCCTCGCCTCGGCGATCGCGGTCGGCGGCTTCATCGGCGTGCCCGCGATGATCTACATCC TCGGCGTTCCGGCGATCATGGCCTCGGCGACCGAACTCGTGATCGCCTTCATCATGGGCCTCGGTGGCACGATCTTCTAC GGCCTCGAAGGCGTCGTCGACATCCGCCTTGCAATGCTGATCCTGCTCGGCTCGCTGTTCGGTGTCCAGCTAGGCGCGAT CGGCACCACCTATGTGAAGGACTACCAGGTCAAGTTCACGATGGCGGTCATCATGCTGACCGTGCTGTTCTCGCGCTTCT TCTACATCCCCGGTTACCTCAGCGACCTCGGCATGATCGAACCGCTGCCCGCAGCGATAACCAAGGCACTCAAGATCGCG GGCGACGGCATCCTCGCCGTGGCGCTGCTCGTCGGCGCCTATACGGTTCTGTCCGCGCTGTTTAAGGGCATGAAGGCGCA CAAGGCGCAGCAGGCCGTGCTGGCCCGCGCCGAAGCTGCTGACTGA
Upstream 100 bases:
>100_bases GCGTTCGCCCTGTCCTACACCCACGGTCTTTTCACCGGCCTGTTCTGGGACGTTGTCGGCCTGAAGGCAAAAAAATAAGC ACCTACCCTGGAAACACGTC
Downstream 100 bases:
>100_bases GCAAGGGGAGAACCATCGTGACCAATACCAATACGCTGACCCAAACCGGCACCCTGCGCCGCATCGTCGTCGCCACCGAC GGAACCGAAGCGTCGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MELINFIEITPLTAILLILVGFVGGMVSGFIGSGGAFVLTPAMMTLGAPGIVAVASNICHKFPKALVGAVKRNKYGQVDI KLGLILGLFAEAGVLFGKGVMTDIKNTFGAVGTDLYVSGMFVVTLAIVGGFVFKDYRKLKALDDAGQGEEAAPLTRLARW VQSVRIPGTMIYSRGAQAEISILFLIPIGFATGFLASAIAVGGFIGVPAMIYILGVPAIMASATELVIAFIMGLGGTIFY GLEGVVDIRLAMLILLGSLFGVQLGAIGTTYVKDYQVKFTMAVIMLTVLFSRFFYIPGYLSDLGMIEPLPAAITKALKIA GDGILAVALLVGAYTVLSALFKGMKAHKAQQAVLARAEAAD
Sequences:
>Translated_361_residues MELINFIEITPLTAILLILVGFVGGMVSGFIGSGGAFVLTPAMMTLGAPGIVAVASNICHKFPKALVGAVKRNKYGQVDI KLGLILGLFAEAGVLFGKGVMTDIKNTFGAVGTDLYVSGMFVVTLAIVGGFVFKDYRKLKALDDAGQGEEAAPLTRLARW VQSVRIPGTMIYSRGAQAEISILFLIPIGFATGFLASAIAVGGFIGVPAMIYILGVPAIMASATELVIAFIMGLGGTIFY GLEGVVDIRLAMLILLGSLFGVQLGAIGTTYVKDYQVKFTMAVIMLTVLFSRFFYIPGYLSDLGMIEPLPAAITKALKIA GDGILAVALLVGAYTVLSALFKGMKAHKAQQAVLARAEAAD >Mature_361_residues MELINFIEITPLTAILLILVGFVGGMVSGFIGSGGAFVLTPAMMTLGAPGIVAVASNICHKFPKALVGAVKRNKYGQVDI KLGLILGLFAEAGVLFGKGVMTDIKNTFGAVGTDLYVSGMFVVTLAIVGGFVFKDYRKLKALDDAGQGEEAAPLTRLARW VQSVRIPGTMIYSRGAQAEISILFLIPIGFATGFLASAIAVGGFIGVPAMIYILGVPAIMASATELVIAFIMGLGGTIFY GLEGVVDIRLAMLILLGSLFGVQLGAIGTTYVKDYQVKFTMAVIMLTVLFSRFFYIPGYLSDLGMIEPLPAAITKALKIA GDGILAVALLVGAYTVLSALFKGMKAHKAQQAVLARAEAAD
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37776; Mature: 37776
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELINFIEITPLTAILLILVGFVGGMVSGFIGSGGAFVLTPAMMTLGAPGIVAVASNICH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH KFPKALVGAVKRNKYGQVDIKLGLILGLFAEAGVLFGKGVMTDIKNTFGAVGTDLYVSGM HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH FVVTLAIVGGFVFKDYRKLKALDDAGQGEEAAPLTRLARWVQSVRIPGTMIYSRGAQAEI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCEE SILFLIPIGFATGFLASAIAVGGFIGVPAMIYILGVPAIMASATELVIAFIMGLGGTIFY EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GLEGVVDIRLAMLILLGSLFGVQLGAIGTTYVKDYQVKFTMAVIMLTVLFSRFFYIPGYL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SDLGMIEPLPAAITKALKIAGDGILAVALLVGAYTVLSALFKGMKAHKAQQAVLARAEAA HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC D C >Mature Secondary Structure MELINFIEITPLTAILLILVGFVGGMVSGFIGSGGAFVLTPAMMTLGAPGIVAVASNICH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH KFPKALVGAVKRNKYGQVDIKLGLILGLFAEAGVLFGKGVMTDIKNTFGAVGTDLYVSGM HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH FVVTLAIVGGFVFKDYRKLKALDDAGQGEEAAPLTRLARWVQSVRIPGTMIYSRGAQAEI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCEE SILFLIPIGFATGFLASAIAVGGFIGVPAMIYILGVPAIMASATELVIAFIMGLGGTIFY EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GLEGVVDIRLAMLILLGSLFGVQLGAIGTTYVKDYQVKFTMAVIMLTVLFSRFFYIPGYL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SDLGMIEPLPAAITKALKIAGDGILAVALLVGAYTVLSALFKGMKAHKAQQAVLARAEAA HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA