| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318576
Identifier: 74318576
GI number: 74318576
Start: 2632477
End: 2633544
Strand: Direct
Name: 74318576
Synonym: Tbd_2558
Alternate gene names: NA
Gene position: 2632477-2633544 (Clockwise)
Preceding gene: 74318575
Following gene: 74318579
Centisome position: 90.47
GC content: 67.79
Gene sequence:
>1068_bases ATGAACGACGCGCTGTCCCCGGAAGACGAGCTCCGCCTGCACGTACTCTTCAACACCGAGCTGCGGGCGGTTCGCATCGA CGAGTCGAGCATGACCCTATGGGCGCTCACGCCCGAAGGTGAGGCGAGCGTGCCGCTCAAGCCGACCGAGCGCGCCGACC GTTATCTGAAAAAGGTGCGCGAGATGCTGTCCGGTTACGCGCTCGGTTCGCCGGGCGGCTACCCGGTGCATCTGACGCGC TGGACGCGCCAGTCGCAGGCCGGGCTGTCGGCCCAGCATCTGGCGCAATTGCTGCTGATCGCGGAGGAGGAAGCGGTCGT CGCTGTGGTGCACTCGCCCGCGCTGACCGACGAGCTCGCGCACTATGCCTGGTGGTGCATGCCGACGATCGAAAACGCCC GCCTCATGCTGATGCGCGACGTCGTCTGCAAAGGCCGCATGGGCCGCGTGCTGGCCGGCTTCCTGGTTGAGCACCTCGCC TTCCTGCACGAGGACGACGTCGGCATCCTCGACACGGTCGCCGTCATGCTGCATTCGGGGGTGCTCAACGAGGCCGAGCG GCTCGCGATCTGGAAGCGCGGCAGCAGCCGCAATTCCTACTACGTCGCCTTCCTCGAACTGCAGCCCGACGATCTGCCGA ATCCACGCGATGCGCGGAGCGACCATGCTGACGTTCCGGCCGTGCCCGACAACCCCTACAGCGCGATGCTGCAAAAGGCC TTGTCGGGCCAGGGCCAGACCTTTCTCGCGACGGTCTCGACCATCCTCGACCGCCCGGAGATCCAGGAAGTCGTCAACCA CACGCTCAACGCGCTCGCGCGCTGGTGCGCGCCCTTGCGCGACGCGGACGCCGCGGCGCGCGCGGCCGCACGCGCCGCCC TGATCGAAGCCGCGCCGCAGTTCTATGCCGATTGCACAGCGCTGGATACGCTCGCCGCGGCCGACAGCGAAAGCGTGCGG CCGATCTTCCTCAAGACGACCGCGATCGGCTCGCTGATGCGGCGCAAGATTCAGCCCGTCGTCACACCGCTGCTCGACGC GAGCGCGACCCTGCGGCGTCAGCCGTAA
Upstream 100 bases:
>100_bases TCGCGCCCTCGGCCTTCGAGGCCGGATTCGTTTCGGCCGCCCACAGCGACGCCGACATCGACGCGACCGTCGCCGCGGCG CGGGAAGTGTTCCGCACGCT
Downstream 100 bases:
>100_bases CTCGCGGCCTCAGGTCCCGAGCGCGGCGTCGACGCTGGCGAGGAATTTCTCGGCCTTCTCGAAGCCGATCACCTTGTAGT CCGACTGGACGCCGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNDALSPEDELRLHVLFNTELRAVRIDESSMTLWALTPEGEASVPLKPTERADRYLKKVREMLSGYALGSPGGYPVHLTR WTRQSQAGLSAQHLAQLLLIAEEEAVVAVVHSPALTDELAHYAWWCMPTIENARLMLMRDVVCKGRMGRVLAGFLVEHLA FLHEDDVGILDTVAVMLHSGVLNEAERLAIWKRGSSRNSYYVAFLELQPDDLPNPRDARSDHADVPAVPDNPYSAMLQKA LSGQGQTFLATVSTILDRPEIQEVVNHTLNALARWCAPLRDADAAARAAARAALIEAAPQFYADCTALDTLAAADSESVR PIFLKTTAIGSLMRRKIQPVVTPLLDASATLRRQP
Sequences:
>Translated_355_residues MNDALSPEDELRLHVLFNTELRAVRIDESSMTLWALTPEGEASVPLKPTERADRYLKKVREMLSGYALGSPGGYPVHLTR WTRQSQAGLSAQHLAQLLLIAEEEAVVAVVHSPALTDELAHYAWWCMPTIENARLMLMRDVVCKGRMGRVLAGFLVEHLA FLHEDDVGILDTVAVMLHSGVLNEAERLAIWKRGSSRNSYYVAFLELQPDDLPNPRDARSDHADVPAVPDNPYSAMLQKA LSGQGQTFLATVSTILDRPEIQEVVNHTLNALARWCAPLRDADAAARAAARAALIEAAPQFYADCTALDTLAAADSESVR PIFLKTTAIGSLMRRKIQPVVTPLLDASATLRRQP >Mature_355_residues MNDALSPEDELRLHVLFNTELRAVRIDESSMTLWALTPEGEASVPLKPTERADRYLKKVREMLSGYALGSPGGYPVHLTR WTRQSQAGLSAQHLAQLLLIAEEEAVVAVVHSPALTDELAHYAWWCMPTIENARLMLMRDVVCKGRMGRVLAGFLVEHLA FLHEDDVGILDTVAVMLHSGVLNEAERLAIWKRGSSRNSYYVAFLELQPDDLPNPRDARSDHADVPAVPDNPYSAMLQKA LSGQGQTFLATVSTILDRPEIQEVVNHTLNALARWCAPLRDADAAARAAARAALIEAAPQFYADCTALDTLAAADSESVR PIFLKTTAIGSLMRRKIQPVVTPLLDASATLRRQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39086; Mature: 39086
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDALSPEDELRLHVLFNTELRAVRIDESSMTLWALTPEGEASVPLKPTERADRYLKKVR CCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH EMLSGYALGSPGGYPVHLTRWTRQSQAGLSAQHLAQLLLIAEEEAVVAVVHSPALTDELA HHHCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHH HYAWWCMPTIENARLMLMRDVVCKGRMGRVLAGFLVEHLAFLHEDDVGILDTVAVMLHSG HHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLNEAERLAIWKRGSSRNSYYVAFLELQPDDLPNPRDARSDHADVPAVPDNPYSAMLQKA HHHHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LSGQGQTFLATVSTILDRPEIQEVVNHTLNALARWCAPLRDADAAARAAARAALIEAAPQ HCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FYADCTALDTLAAADSESVRPIFLKTTAIGSLMRRKIQPVVTPLLDASATLRRQP HHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC >Mature Secondary Structure MNDALSPEDELRLHVLFNTELRAVRIDESSMTLWALTPEGEASVPLKPTERADRYLKKVR CCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH EMLSGYALGSPGGYPVHLTRWTRQSQAGLSAQHLAQLLLIAEEEAVVAVVHSPALTDELA HHHCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHH HYAWWCMPTIENARLMLMRDVVCKGRMGRVLAGFLVEHLAFLHEDDVGILDTVAVMLHSG HHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLNEAERLAIWKRGSSRNSYYVAFLELQPDDLPNPRDARSDHADVPAVPDNPYSAMLQKA HHHHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LSGQGQTFLATVSTILDRPEIQEVVNHTLNALARWCAPLRDADAAARAAARAALIEAAPQ HCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FYADCTALDTLAAADSESVRPIFLKTTAIGSLMRRKIQPVVTPLLDASATLRRQP HHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA