Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318564

Identifier: 74318564

GI number: 74318564

Start: 2615821

End: 2617653

Strand: Direct

Name: 74318564

Synonym: Tbd_2546

Alternate gene names: NA

Gene position: 2615821-2617653 (Clockwise)

Preceding gene: 74318561

Following gene: 74318565

Centisome position: 89.9

GC content: 66.83

Gene sequence:

>1833_bases
ATGGCGACCCGCGACACTCTCGCTTCCAAGGAAGGGCAATGCAGCAGCGGCGCCGAATACGCGGCCCTTGCGCTCGAAGC
GCTGCAGGAGCCGACCGACGCGGCCTATGCGAAGGAGCTGATGGACCGCGTCGCGGACGACTGCCAATTCACCAAAGACC
TGGCTGCCTGCGCGATCGTCTACCAGGCGCTGGGCGAGCAGGCCCGGGCCGAGGAACTGCTGCAGACCGCGGAAGACTAC
TGCATGAGCGGGGACGAGCAGGTCGCGCTGGCGGAAGCCAAGTTCAAGATCTCGGGCGACAAGGCCGCCGCGATCGGCGC
CTATGAAAAAGCGCTCAAGGAAACCGGCAATCTCGACCCGCTGATCGATCTTGCGAGGAACGTCATGGGCGTGATCGCCG
ACCCGGCCTTCGCCAAGAAGGTCCTCGAGAAGGCCGAGGCGAAGATTTCGCGCGCGGTCGAGTACAGCAAGCTCGCTGCC
GCCTCGGCGGAACACCTGCTGGACAAGGAGTACGCCGCGGCGATCTTCAGCAAGGCCGCCGAGAAGCTTTCCGCAGTGCC
AGATCTGCTGGCGCTCGCCGCCGAGGTGACCAAGACTCTCGGTGACCCCGAAAAAGCGCGTGCGCTCTACCAGCGCGCGC
TCGAGGGTGCGACCGACTTCAACGCCGCGAAGACGCTGATCGAGTCGGCGAAACAGGCGGGGGACGCCGCATTCACCCAG
GCCGCGCTCAAGAAGGCGGGCGATCTCGCCAGCGCGACCGGCGACTACATCGAACTCGCCGCCGGGCTTGCCGGCGTCGG
CGACAAGTCCGGCGCCGCCGCCCTGCTCGACAAGGCCGAAGACGCGGTGGCGGGGCTCGACGAGATGCAGAAGCTCGTCA
GCGCGGTCGAGGCCCATCTCGCCGACGACGCCGAGCGCCTCGCGCGGGTCAAGGCCAAGCTCGAGAAGCGCCAAGCCAAT
CACGCGCGCTACATGGAATTCCAGCAACTCGAAAAAGATGCGGTCAACGTCAAGCAGTTCCTCGCCCTCGCCGAACGCGT
CCGGCTGGAACTGGAAGACCCCTTCTATTCGGCCAAGCTGATCGAGTCGGCGGAAACCCTTCTCGACGGCACCGGCTATC
AGTTCTCACGTTACAAGCCGATTCTTCTGGCGGTCGACAAGAACCTCGACGACACGGCCTGGCTCGAACGCCTGCTCGAC
CGCGCCGCCGAAAATGCGGCCGACTTCGTCGCCTTCCGGGATCTGGTCGTGACCGCCGCGCATCTTCAGCATCGCGAACT
CGGCGTGTCGAAGGCGCGCGCCTACCTCGCCGCGCGTGAGGCCGAACTCGCCGCCGATTCCGAGACCTCGGTTTACGACA
TCGCCAAACTCGCCGAGGCGAGCTACGCGGCGACCCGGGACAGCGCCGAGGCCGGCCGCCTACTCGAACTCGCGCGCGCG
CAGGCGAAGGACCATTTCGCGCTGACCCACATCGGCCGCCTGTACGGTTCGATGGGCGACGAGGCCAAGGCCGACGAACT
CTATGCGGCCGCGGCGGCGGCGTGCCCGAGCGGCGACGCCTGCATCCAGTTCATCGACCGGCTCAAGGGCTTCGCGCTGC
CCACCGAGGCATTGAAAAAATGGTACGTGCAATGCGGCGCCCACCTTTCCGCGCCGGCCGACAAGCTGCGCTGGGCCGAG
GGCATCGCCGACGCCCTCAACGACAAGCGCTGGGCGACCGAGGTTTACGGCGAACTGGCGGGCCAGTTCAGCGGAGCGGA
CGCCGCGCGCTTCGAATTCAGCCGCCGCACGCACGCCGATCTGGGTTATTTCGGCGCCACGCGCCGCCATTGA

Upstream 100 bases:

>100_bases
CCCGGCTAATAGCGCCATCGACATTACTTATTGGCTGCGATCGGTACGCCGACGGAAAATCGCGGAACCTCTTTTCATAT
CTTTTTTTCGGAGACACCCC

Downstream 100 bases:

>100_bases
GGACGCGTGATGCCCCTGAATACGGCCCGGTTATTCGGGCCGTATTTGTTTGTACACTGCGGAGTGAAGCTGTTGCAGGA
GCCCCTCCATGGTCGAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MATRDTLASKEGQCSSGAEYAALALEALQEPTDAAYAKELMDRVADDCQFTKDLAACAIVYQALGEQARAEELLQTAEDY
CMSGDEQVALAEAKFKISGDKAAAIGAYEKALKETGNLDPLIDLARNVMGVIADPAFAKKVLEKAEAKISRAVEYSKLAA
ASAEHLLDKEYAAAIFSKAAEKLSAVPDLLALAAEVTKTLGDPEKARALYQRALEGATDFNAAKTLIESAKQAGDAAFTQ
AALKKAGDLASATGDYIELAAGLAGVGDKSGAAALLDKAEDAVAGLDEMQKLVSAVEAHLADDAERLARVKAKLEKRQAN
HARYMEFQQLEKDAVNVKQFLALAERVRLELEDPFYSAKLIESAETLLDGTGYQFSRYKPILLAVDKNLDDTAWLERLLD
RAAENAADFVAFRDLVVTAAHLQHRELGVSKARAYLAAREAELAADSETSVYDIAKLAEASYAATRDSAEAGRLLELARA
QAKDHFALTHIGRLYGSMGDEAKADELYAAAAAACPSGDACIQFIDRLKGFALPTEALKKWYVQCGAHLSAPADKLRWAE
GIADALNDKRWATEVYGELAGQFSGADAARFEFSRRTHADLGYFGATRRH

Sequences:

>Translated_610_residues
MATRDTLASKEGQCSSGAEYAALALEALQEPTDAAYAKELMDRVADDCQFTKDLAACAIVYQALGEQARAEELLQTAEDY
CMSGDEQVALAEAKFKISGDKAAAIGAYEKALKETGNLDPLIDLARNVMGVIADPAFAKKVLEKAEAKISRAVEYSKLAA
ASAEHLLDKEYAAAIFSKAAEKLSAVPDLLALAAEVTKTLGDPEKARALYQRALEGATDFNAAKTLIESAKQAGDAAFTQ
AALKKAGDLASATGDYIELAAGLAGVGDKSGAAALLDKAEDAVAGLDEMQKLVSAVEAHLADDAERLARVKAKLEKRQAN
HARYMEFQQLEKDAVNVKQFLALAERVRLELEDPFYSAKLIESAETLLDGTGYQFSRYKPILLAVDKNLDDTAWLERLLD
RAAENAADFVAFRDLVVTAAHLQHRELGVSKARAYLAAREAELAADSETSVYDIAKLAEASYAATRDSAEAGRLLELARA
QAKDHFALTHIGRLYGSMGDEAKADELYAAAAAACPSGDACIQFIDRLKGFALPTEALKKWYVQCGAHLSAPADKLRWAE
GIADALNDKRWATEVYGELAGQFSGADAARFEFSRRTHADLGYFGATRRH
>Mature_609_residues
ATRDTLASKEGQCSSGAEYAALALEALQEPTDAAYAKELMDRVADDCQFTKDLAACAIVYQALGEQARAEELLQTAEDYC
MSGDEQVALAEAKFKISGDKAAAIGAYEKALKETGNLDPLIDLARNVMGVIADPAFAKKVLEKAEAKISRAVEYSKLAAA
SAEHLLDKEYAAAIFSKAAEKLSAVPDLLALAAEVTKTLGDPEKARALYQRALEGATDFNAAKTLIESAKQAGDAAFTQA
ALKKAGDLASATGDYIELAAGLAGVGDKSGAAALLDKAEDAVAGLDEMQKLVSAVEAHLADDAERLARVKAKLEKRQANH
ARYMEFQQLEKDAVNVKQFLALAERVRLELEDPFYSAKLIESAETLLDGTGYQFSRYKPILLAVDKNLDDTAWLERLLDR
AAENAADFVAFRDLVVTAAHLQHRELGVSKARAYLAAREAELAADSETSVYDIAKLAEASYAATRDSAEAGRLLELARAQ
AKDHFALTHIGRLYGSMGDEAKADELYAAAAAACPSGDACIQFIDRLKGFALPTEALKKWYVQCGAHLSAPADKLRWAEG
IADALNDKRWATEVYGELAGQFSGADAARFEFSRRTHADLGYFGATRRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65541; Mature: 65410

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRDTLASKEGQCSSGAEYAALALEALQEPTDAAYAKELMDRVADDCQFTKDLAACAIV
CCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQALGEQARAEELLQTAEDYCMSGDEQVALAEAKFKISGDKAAAIGAYEKALKETGNLDP
HHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEHHEEEECCCCHHHHHHHHHHHHHCCCCCH
LIDLARNVMGVIADPAFAKKVLEKAEAKISRAVEYSKLAAASAEHLLDKEYAAAIFSKAA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLSAVPDLLALAAEVTKTLGDPEKARALYQRALEGATDFNAAKTLIESAKQAGDAAFTQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHH
AALKKAGDLASATGDYIELAAGLAGVGDKSGAAALLDKAEDAVAGLDEMQKLVSAVEAHL
HHHHHHCCHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
ADDAERLARVKAKLEKRQANHARYMEFQQLEKDAVNVKQFLALAERVRLELEDPFYSAKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IESAETLLDGTGYQFSRYKPILLAVDKNLDDTAWLERLLDRAAENAADFVAFRDLVVTAA
HHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLQHRELGVSKARAYLAAREAELAADSETSVYDIAKLAEASYAATRDSAEAGRLLELARA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QAKDHFALTHIGRLYGSMGDEAKADELYAAAAAACPSGDACIQFIDRLKGFALPTEALKK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHH
WYVQCGAHLSAPADKLRWAEGIADALNDKRWATEVYGELAGQFSGADAARFEFSRRTHAD
HHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
LGYFGATRRH
HHHCCCCCCC
>Mature Secondary Structure 
ATRDTLASKEGQCSSGAEYAALALEALQEPTDAAYAKELMDRVADDCQFTKDLAACAIV
CCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQALGEQARAEELLQTAEDYCMSGDEQVALAEAKFKISGDKAAAIGAYEKALKETGNLDP
HHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEHHEEEECCCCHHHHHHHHHHHHHCCCCCH
LIDLARNVMGVIADPAFAKKVLEKAEAKISRAVEYSKLAAASAEHLLDKEYAAAIFSKAA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLSAVPDLLALAAEVTKTLGDPEKARALYQRALEGATDFNAAKTLIESAKQAGDAAFTQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHH
AALKKAGDLASATGDYIELAAGLAGVGDKSGAAALLDKAEDAVAGLDEMQKLVSAVEAHL
HHHHHHCCHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
ADDAERLARVKAKLEKRQANHARYMEFQQLEKDAVNVKQFLALAERVRLELEDPFYSAKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IESAETLLDGTGYQFSRYKPILLAVDKNLDDTAWLERLLDRAAENAADFVAFRDLVVTAA
HHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLQHRELGVSKARAYLAAREAELAADSETSVYDIAKLAEASYAATRDSAEAGRLLELARA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QAKDHFALTHIGRLYGSMGDEAKADELYAAAAAACPSGDACIQFIDRLKGFALPTEALKK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHH
WYVQCGAHLSAPADKLRWAEGIADALNDKRWATEVYGELAGQFSGADAARFEFSRRTHAD
HHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
LGYFGATRRH
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA