| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yneT [H]
Identifier: 74318543
GI number: 74318543
Start: 2596458
End: 2596877
Strand: Direct
Name: yneT [H]
Synonym: Tbd_2525
Alternate gene names: 74318543
Gene position: 2596458-2596877 (Clockwise)
Preceding gene: 74318542
Following gene: 74318544
Centisome position: 89.23
GC content: 64.52
Gene sequence:
>420_bases GTGAGCTTCGAAAACCCAGATGACGACACGCTGCGGCGCCTGCTCGATGACATCAAGACGATCGCCGTGGTCGGCCTTTC GCCGCAGCCTGCGCGCCCGAGCTTCCGCGTCGCGCAGGCCATGCAGGGCTACGGCTTTCGCATCGTGCCGGTGCGCCCGG CCGTCGAGCAGGTGTTGGGCGAGAAGGCCTACGCGCGCCTCGACGACATTCCGTTCAAGGTCGACCTCGTCAACGTCTTT CGCGCGGCCGAACATGTGCCGGCTATCGTCGAGCAATGCCTGGCGCTACACTTGCCCGCAATTTGGATACAGGAAGGCAT CGTCCACGTCGAGGCCGCCGAAACCGGGCGCGCGGCCGGCATGACCGTGGTGATGGACCGCTGCCTTCTCAAGGAATACA TCAGGCTCAGAACCGCATGA
Upstream 100 bases:
>100_bases TCCGGGCCTACGAAAAATACGGCTTCCGCATCGTCGAGGCACGCGTGTTCGACATCGGACAGGGTTTCGTGATGGACGAC TACATACTGGAGAAGGCGTT
Downstream 100 bases:
>100_bases ACAGCCAGGACCGAACCCCCGACGCGCGCACGCGGCTGCGCTTCACCAAGATGCACGGCCTTGGCAACGATTTCGTCGTG TTCGACGGCGTCAACCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLGEKAYARLDDIPFKVDLVNVF RAAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAGMTVVMDRCLLKEYIRLRTA
Sequences:
>Translated_139_residues MSFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLGEKAYARLDDIPFKVDLVNVF RAAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAGMTVVMDRCLLKEYIRLRTA >Mature_138_residues SFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLGEKAYARLDDIPFKVDLVNVFR AAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAGMTVVMDRCLLKEYIRLRTA
Specific function: Unknown
COG id: COG1832
COG function: function code R; Predicted CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081810, Length=128, Percent_Identity=40.625, Blast_Score=103, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003781 - InterPro: IPR016040 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15478; Mature: 15347
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHH EKAYARLDDIPFKVDLVNVFRAAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCC MTVVMDRCLLKEYIRLRTA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLG CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHH EKAYARLDDIPFKVDLVNVFRAAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCC MTVVMDRCLLKEYIRLRTA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969507; 9384377 [H]