Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yneT [H]

Identifier: 74318543

GI number: 74318543

Start: 2596458

End: 2596877

Strand: Direct

Name: yneT [H]

Synonym: Tbd_2525

Alternate gene names: 74318543

Gene position: 2596458-2596877 (Clockwise)

Preceding gene: 74318542

Following gene: 74318544

Centisome position: 89.23

GC content: 64.52

Gene sequence:

>420_bases
GTGAGCTTCGAAAACCCAGATGACGACACGCTGCGGCGCCTGCTCGATGACATCAAGACGATCGCCGTGGTCGGCCTTTC
GCCGCAGCCTGCGCGCCCGAGCTTCCGCGTCGCGCAGGCCATGCAGGGCTACGGCTTTCGCATCGTGCCGGTGCGCCCGG
CCGTCGAGCAGGTGTTGGGCGAGAAGGCCTACGCGCGCCTCGACGACATTCCGTTCAAGGTCGACCTCGTCAACGTCTTT
CGCGCGGCCGAACATGTGCCGGCTATCGTCGAGCAATGCCTGGCGCTACACTTGCCCGCAATTTGGATACAGGAAGGCAT
CGTCCACGTCGAGGCCGCCGAAACCGGGCGCGCGGCCGGCATGACCGTGGTGATGGACCGCTGCCTTCTCAAGGAATACA
TCAGGCTCAGAACCGCATGA

Upstream 100 bases:

>100_bases
TCCGGGCCTACGAAAAATACGGCTTCCGCATCGTCGAGGCACGCGTGTTCGACATCGGACAGGGTTTCGTGATGGACGAC
TACATACTGGAGAAGGCGTT

Downstream 100 bases:

>100_bases
ACAGCCAGGACCGAACCCCCGACGCGCGCACGCGGCTGCGCTTCACCAAGATGCACGGCCTTGGCAACGATTTCGTCGTG
TTCGACGGCGTCAACCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLGEKAYARLDDIPFKVDLVNVF
RAAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAGMTVVMDRCLLKEYIRLRTA

Sequences:

>Translated_139_residues
MSFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLGEKAYARLDDIPFKVDLVNVF
RAAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAGMTVVMDRCLLKEYIRLRTA
>Mature_138_residues
SFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLGEKAYARLDDIPFKVDLVNVFR
AAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAGMTVVMDRCLLKEYIRLRTA

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081810, Length=128, Percent_Identity=40.625, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15478; Mature: 15347

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHH
EKAYARLDDIPFKVDLVNVFRAAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCC
MTVVMDRCLLKEYIRLRTA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFENPDDDTLRRLLDDIKTIAVVGLSPQPARPSFRVAQAMQGYGFRIVPVRPAVEQVLG
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHH
EKAYARLDDIPFKVDLVNVFRAAEHVPAIVEQCLALHLPAIWIQEGIVHVEAAETGRAAG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCC
MTVVMDRCLLKEYIRLRTA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]