| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is lpxP [H]
Identifier: 74318540
GI number: 74318540
Start: 2594194
End: 2595057
Strand: Direct
Name: lpxP [H]
Synonym: Tbd_2522
Alternate gene names: 74318540
Gene position: 2594194-2595057 (Clockwise)
Preceding gene: 74318530
Following gene: 74318541
Centisome position: 89.15
GC content: 70.14
Gene sequence:
>864_bases ATGCTGTTGCTGAAGCTGATCGCCCGCGTGCCGCTGCCGCTGCTGCATAGCTTCGGCATTCTGTTCGGCTGGCTCGTCTA TCTGGCGCCCGGGCGCCACGCGCAGCGCATGCGCGACAACCTGTCCGCCAGCGGGCTGTGTCGACCCGGTACGGAGTGCC GCCGCCTGCTGCGGCAAACGATCGGCGAATCGGGCAAGGCCGTGGTCGAGTTGCTGCCGGTGTGGCTGCGTCCCCACGAG GGGGTGCTCAGATTGGTGCGGGACACGCGCGACTGGGAACACATCGACGCCGCGCTCGCGGCCGGCCGTGGCGTGATCCT GATCGCGCCGCACCTCGGCTGCTTCGAGATCATCAACCTCTATTACGCGGCACGTCATCCGTTCACCGCGATGTACAAGC CGCCGCGCCAGCCAATGCTCGCCAGGCTCATGCTCATGGGCCGCCAGCGCGGCCAGGCGACGCTCGTGCCGACTGACCTT TCCGGCGTGCGCGCGCTGCTCGCGGCACTCAAGCGCCACGAGGCGATCGGCATCCTGCCCGACCAGGTCGCGACCGGCGG CGACGGGGTATGGGCGCCCTTCTTCGGCCGCCCGGCCTACACGCCGACACTCGTCGCCAGCCTGCAGCGCAAGACCGGCG CGGCAGCGTTCTTCGTCGCGGCGGAGCGCCTGAGCTGGGGCCGCGGCTACCGCCTGCACGTGACCCCGGTCGGCGACACG CTGCCCGATGACAAGACCGCAGCGGCCTTGCGGATCAACCAGGGCGTCGAAGCCTTCGTGCGGCGCTTTCCGGCGCAGTA CATGTGGAGCTACAACCGCTACAAGCGCCCCGGCGGGGCCCCGCCTCCGGACGCAACGACGTGA
Upstream 100 bases:
>100_bases GTGCTTCCTCCAGAGTCAATTCCCAGGACAGGACTTCGATCCACAACGGCGGCTTGCCCCCCTCGGGACGCAAGCCCGTG TCGCGTCGCATCGCGGCGTG
Downstream 100 bases:
>100_bases AGCAATCGCGCGCGCAGCTCCTTCATCCCTCGCTTTTCGGCGTCTGGCTCGGCGTCGGCCTGCTGTGGCTGCTGCACTGG CTGCCTCTGCCGCTGCTGGC
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MLLLKLIARVPLPLLHSFGILFGWLVYLAPGRHAQRMRDNLSASGLCRPGTECRRLLRQTIGESGKAVVELLPVWLRPHE GVLRLVRDTRDWEHIDAALAAGRGVILIAPHLGCFEIINLYYAARHPFTAMYKPPRQPMLARLMLMGRQRGQATLVPTDL SGVRALLAALKRHEAIGILPDQVATGGDGVWAPFFGRPAYTPTLVASLQRKTGAAAFFVAAERLSWGRGYRLHVTPVGDT LPDDKTAAALRINQGVEAFVRRFPAQYMWSYNRYKRPGGAPPPDATT
Sequences:
>Translated_287_residues MLLLKLIARVPLPLLHSFGILFGWLVYLAPGRHAQRMRDNLSASGLCRPGTECRRLLRQTIGESGKAVVELLPVWLRPHE GVLRLVRDTRDWEHIDAALAAGRGVILIAPHLGCFEIINLYYAARHPFTAMYKPPRQPMLARLMLMGRQRGQATLVPTDL SGVRALLAALKRHEAIGILPDQVATGGDGVWAPFFGRPAYTPTLVASLQRKTGAAAFFVAAERLSWGRGYRLHVTPVGDT LPDDKTAAALRINQGVEAFVRRFPAQYMWSYNRYKRPGGAPPPDATT >Mature_287_residues MLLLKLIARVPLPLLHSFGILFGWLVYLAPGRHAQRMRDNLSASGLCRPGTECRRLLRQTIGESGKAVVELLPVWLRPHE GVLRLVRDTRDWEHIDAALAAGRGVILIAPHLGCFEIINLYYAARHPFTAMYKPPRQPMLARLMLMGRQRGQATLVPTDL SGVRALLAALKRHEAIGILPDQVATGGDGVWAPFFGRPAYTPTLVASLQRKTGAAAFFVAAERLSWGRGYRLHVTPVGDT LPDDKTAAALRINQGVEAFVRRFPAQYMWSYNRYKRPGGAPPPDATT
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI87082094, Length=282, Percent_Identity=28.0141843971631, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787292, Length=285, Percent_Identity=27.719298245614, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 31769; Mature: 31769
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLKLIARVPLPLLHSFGILFGWLVYLAPGRHAQRMRDNLSASGLCRPGTECRRLLRQT CHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IGESGKAVVELLPVWLRPHEGVLRLVRDTRDWEHIDAALAAGRGVILIAPHLGCFEIINL HCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHH YYAARHPFTAMYKPPRQPMLARLMLMGRQRGQATLVPTDLSGVRALLAALKRHEAIGILP HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCC DQVATGGDGVWAPFFGRPAYTPTLVASLQRKTGAAAFFVAAERLSWGRGYRLHVTPVGDT HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCC LPDDKTAAALRINQGVEAFVRRFPAQYMWSYNRYKRPGGAPPPDATT CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLLLKLIARVPLPLLHSFGILFGWLVYLAPGRHAQRMRDNLSASGLCRPGTECRRLLRQT CHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IGESGKAVVELLPVWLRPHEGVLRLVRDTRDWEHIDAALAAGRGVILIAPHLGCFEIINL HCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHH YYAARHPFTAMYKPPRQPMLARLMLMGRQRGQATLVPTDLSGVRALLAALKRHEAIGILP HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCC DQVATGGDGVWAPFFGRPAYTPTLVASLQRKTGAAAFFVAAERLSWGRGYRLHVTPVGDT HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCC LPDDKTAAALRINQGVEAFVRRFPAQYMWSYNRYKRPGGAPPPDATT CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]