| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318509
Identifier: 74318509
GI number: 74318509
Start: 2564170
End: 2565075
Strand: Direct
Name: 74318509
Synonym: Tbd_2491
Alternate gene names: NA
Gene position: 2564170-2565075 (Clockwise)
Preceding gene: 74318508
Following gene: 74318510
Centisome position: 88.12
GC content: 68.43
Gene sequence:
>906_bases TTGCGCGGCTCTCCCTTCGACCTCGGCAACGCGTCGGCCTACCGCGCCTGGCGCGACGCCAAGCTCGCCGCCTATCCGCG CAGCGCCGACGAACTCGTCGTGCCGCTCGCCGACCCGCGCCAGTTGACGGCGGCCGAGACCGCCGCACTCGCAGATCGCT GCGGACGCGCCAACATGGCGATCTACAGCGCGCCGCATCTTCCCGCTGCCGACAAGTCGCTCGCCAGCGAACTCGCGCGC CAACTCGGCCTGACCCGGCTCGAAGGCAATTACCTCGCCGACGAGGACGGGCTCTCGAGCATCACGCCGGCCGGCGACGA AGGCACCGTGCGCGGCGACTACATCCCCTACACGCACAAGCCGATCAACTGGCACACCGACGGCTATTACAACGCGCTCG ACCGGCGCATCCTCGGCATGACGCTGCACTGTGCACAGGACGCCGAGGCAGGGGGCGAGAACGCGCTGCTCGATCACGAA ATCGCCTACATCCAGCTGCGTGACACCGATCCCGACTATGTCGCCGCACTCATGCAGCCCGACGCGATGACGATTCCGGC GCGCATGGACGAGAACGACATCGCGCGTCCCGCGCAGAGCGGCCCGGTGTTCGCGGTCGACCCGGACCAGGGCTTCCTGT ACATGCGCTACACGGCCCGTACCCGCTCGATCGTCTGGAAGGACGACGCGCTCACGCAATGCGCAGTCAAAGCGCTCACC GAGATCCTTGCCGGCTCGCCCTACATCCTCAGCGCACGGCTACGGCCCGGTATGGGCCTCGTCTGCAACAACGTGCTGCA CACACGCAGCGCGTTTTCCGACTCGCCAGGGCGTCGCCGCCTGCTCTATCGCGGGCGTTACTACGACCGCCTCGACTTCG CCGCGCGCGGCCGGGGCCGCGGGTAA
Upstream 100 bases:
>100_bases AAATGATGGGCACGGTGAGGAAGAGCTTCAAGGGCCTGCTGTCCGACGCGCCGGTCAAGCGCGGCTTCGGCTCGCCCGAC ATGCTGCCGCCGGAATAAGC
Downstream 100 bases:
>100_bases AGTAGAATAGCGGTCTCCTGTTTCGGCCTTCCGCCGTCGTCATGCAGCTGCTCACCCTCGGGGTCAATCATCACACCGCA CCGCTCGCGATCCGCGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRGSPFDLGNASAYRAWRDAKLAAYPRSADELVVPLADPRQLTAAETAALADRCGRANMAIYSAPHLPAADKSLASELAR QLGLTRLEGNYLADEDGLSSITPAGDEGTVRGDYIPYTHKPINWHTDGYYNALDRRILGMTLHCAQDAEAGGENALLDHE IAYIQLRDTDPDYVAALMQPDAMTIPARMDENDIARPAQSGPVFAVDPDQGFLYMRYTARTRSIVWKDDALTQCAVKALT EILAGSPYILSARLRPGMGLVCNNVLHTRSAFSDSPGRRRLLYRGRYYDRLDFAARGRGRG
Sequences:
>Translated_301_residues MRGSPFDLGNASAYRAWRDAKLAAYPRSADELVVPLADPRQLTAAETAALADRCGRANMAIYSAPHLPAADKSLASELAR QLGLTRLEGNYLADEDGLSSITPAGDEGTVRGDYIPYTHKPINWHTDGYYNALDRRILGMTLHCAQDAEAGGENALLDHE IAYIQLRDTDPDYVAALMQPDAMTIPARMDENDIARPAQSGPVFAVDPDQGFLYMRYTARTRSIVWKDDALTQCAVKALT EILAGSPYILSARLRPGMGLVCNNVLHTRSAFSDSPGRRRLLYRGRYYDRLDFAARGRGRG >Mature_301_residues MRGSPFDLGNASAYRAWRDAKLAAYPRSADELVVPLADPRQLTAAETAALADRCGRANMAIYSAPHLPAADKSLASELAR QLGLTRLEGNYLADEDGLSSITPAGDEGTVRGDYIPYTHKPINWHTDGYYNALDRRILGMTLHCAQDAEAGGENALLDHE IAYIQLRDTDPDYVAALMQPDAMTIPARMDENDIARPAQSGPVFAVDPDQGFLYMRYTARTRSIVWKDDALTQCAVKALT EILAGSPYILSARLRPGMGLVCNNVLHTRSAFSDSPGRRRLLYRGRYYDRLDFAARGRGRG
Specific function: Unknown
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33096; Mature: 33096
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSPFDLGNASAYRAWRDAKLAAYPRSADELVVPLADPRQLTAAETAALADRCGRANMA CCCCCCCCCCCHHHHHHHCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEE IYSAPHLPAADKSLASELARQLGLTRLEGNYLADEDGLSSITPAGDEGTVRGDYIPYTHK EEECCCCCCCHHHHHHHHHHHHCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC PINWHTDGYYNALDRRILGMTLHCAQDAEAGGENALLDHEIAYIQLRDTDPDYVAALMQP CCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCEEECEEEEEEEECCCHHHHHHHCCC DAMTIPARMDENDIARPAQSGPVFAVDPDQGFLYMRYTARTRSIVWKDDALTQCAVKALT CCEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHH EILAGSPYILSARLRPGMGLVCNNVLHTRSAFSDSPGRRRLLYRGRYYDRLDFAARGRGR HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCC G C >Mature Secondary Structure MRGSPFDLGNASAYRAWRDAKLAAYPRSADELVVPLADPRQLTAAETAALADRCGRANMA CCCCCCCCCCCHHHHHHHCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEE IYSAPHLPAADKSLASELARQLGLTRLEGNYLADEDGLSSITPAGDEGTVRGDYIPYTHK EEECCCCCCCHHHHHHHHHHHHCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC PINWHTDGYYNALDRRILGMTLHCAQDAEAGGENALLDHEIAYIQLRDTDPDYVAALMQP CCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCEEECEEEEEEEECCCHHHHHHHCCC DAMTIPARMDENDIARPAQSGPVFAVDPDQGFLYMRYTARTRSIVWKDDALTQCAVKALT CCEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHH EILAGSPYILSARLRPGMGLVCNNVLHTRSAFSDSPGRRRLLYRGRYYDRLDFAARGRGR HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA