| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is dsrE [H]
Identifier: 74318501
GI number: 74318501
Start: 2558116
End: 2558475
Strand: Reverse
Name: dsrE [H]
Synonym: Tbd_2483
Alternate gene names: 74318501
Gene position: 2558475-2558116 (Counterclockwise)
Preceding gene: 74318502
Following gene: 74318500
Centisome position: 87.93
GC content: 57.5
Gene sequence:
>360_bases ATGCAATTCGGCATTCTTGTAAACGAAGGGCCTTACAACCATCAGGCCAGTGACTCCGCATACCTCTTCGCGCGCACCGC GATCGAGAAGGGTCACAAAGTACCGCGTATCTTTTTCTACCATGACGGCGTGAACAATTCCACGCGCATGGGCGAGCCCC CGCAGGACGATCGCAACGTCACTACGCGCTGGTCCAAACTGGCCGAAGAGCATGGGATCGATCTGGTGGTGTGCGTGGCA GCAGCGTTGCGTCGCGGCATCAAGGACGAACTCCTTGCCCCCGGATTCCGGATCTCCGGACTGGGTCAGTTGGTCGAGAT GGGCATTCAGTACGATCGTCTCGTGACGTTCGGTGATTAA
Upstream 100 bases:
>100_bases GCTTCTGAGCGGGCTGGGAGGCAGTCACGCTCGCCGGAGCCATTGTGGCTCCGGCGAGTCCCCGATAACAATGACTGGAT TTTTCGGAGTTTGAGTAGCC
Downstream 100 bases:
>100_bases GGGATAGCGAGATGAGCGATATGGATGAGATGGAAGACGGCTCCGGCGTCGTCAAGAAATTCATGTTCCTGAACCGCAAG GCGCCTCACGGTACCGTGTA
Product: DsrE protein
Products: NA
Alternate protein names: Intracellular sulfur oxidation protein dsrE [H]
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MQFGILVNEGPYNHQASDSAYLFARTAIEKGHKVPRIFFYHDGVNNSTRMGEPPQDDRNVTTRWSKLAEEHGIDLVVCVA AALRRGIKDELLAPGFRISGLGQLVEMGIQYDRLVTFGD
Sequences:
>Translated_119_residues MQFGILVNEGPYNHQASDSAYLFARTAIEKGHKVPRIFFYHDGVNNSTRMGEPPQDDRNVTTRWSKLAEEHGIDLVVCVA AALRRGIKDELLAPGFRISGLGQLVEMGIQYDRLVTFGD >Mature_119_residues MQFGILVNEGPYNHQASDSAYLFARTAIEKGHKVPRIFFYHDGVNNSTRMGEPPQDDRNVTTRWSKLAEEHGIDLVVCVA AALRRGIKDELLAPGFRISGLGQLVEMGIQYDRLVTFGD
Specific function: Not known. Could be involved in the oxidation of intracellular sulfur [H]
COG id: COG1553
COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrE/tusD family [H]
Homologues:
Organism=Escherichia coli, GI1789743, Length=128, Percent_Identity=39.0625, Blast_Score=103, Evalue=5e-24,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 - InterPro: IPR017463 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 13306; Mature: 13306
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFGILVNEGPYNHQASDSAYLFARTAIEKGHKVPRIFFYHDGVNNSTRMGEPPQDDRNV CCCEEEECCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCH TTRWSKLAEEHGIDLVVCVAAALRRGIKDELLAPGFRISGLGQLVEMGIQYDRLVTFGD HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MQFGILVNEGPYNHQASDSAYLFARTAIEKGHKVPRIFFYHDGVNNSTRMGEPPQDDRNV CCCEEEECCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCH TTRWSKLAEEHGIDLVVCVAAALRRGIKDELLAPGFRISGLGQLVEMGIQYDRLVTFGD HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9695921 [H]